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The map label for this gene is 222526442

Identifier: 222526442

GI number: 222526442

Start: 4004691

End: 4005749

Strand: Direct

Name: 222526442

Synonym: Chy400_3209

Alternate gene names: NA

Gene position: 4004691-4005749 (Clockwise)

Preceding gene: 222526433

Following gene: 222526444

Centisome position: 76.01

GC content: 56.94

Gene sequence:

>1059_bases
ATGAAGTTAGATTGGGATCGGTTGCGGTTTCCGCCAGATACGTTACGGTTGACGACCATCGAGACTCATGCTGCCGGTGA
GCCGTTACGGATTGTCACCGGCGGTCTACCAGACATTATCGGGACAACGATCCTCGAACGCCGTCGTTTTATGCGCGATC
ACCTCGATCATGTCCGGCGAGCATTGATGTGGGAGCCGCGAGGTCATTTCAATATGTACGGTTGTGTGATCACGCCGCCG
GTGAGTGCCGAAGCCGACGCTGGCGTGCTCTTTATGCACAACGAAGGGTACAGCACGATGTGCGGTCACGGCGTTATTGC
GCTCGTCACTGTGCTGGTCGAGAGTGGCGCGGTGGTAGGAGAAGGTGATCAGGCGATGGTCACTCTCGATACACCTGCCG
GGCTGGTGAAGGCAACCGCGCACCTTGAAAGCGGCAGAGTAATCCGGGTCTCATTTCGTAACGTCCCATCATTTGTATAT
GCACGCGATCTACAGGTTGATGTACCGGGTTATGGTCAGGTGGTGTGCGATGTGGCGTGGGGAGGGGCGTTTTATGCCGT
TCTGCCGGCAGCCCAGCTTGGGCTTCGGGTAACCCCAGAACAGACAGCGGCGCTGGTTGTGGCAGGTGAAGCAATCAAGC
GGGCGGTGAGCGATGTTCTACCGCTCCATCATCCTCACGATCCAGACCTGGGTTTTCTGTACGGTACGATCTTGACCGAC
CAGCCCGAAGATGCCGCTCACCATAGTCGCAATATCTGCGTATTTGCCAATGCTGAAGTAGATCGTTCACCGACGGGTAC
GGGCGTTTCGGCGCGCCTGGCTATTCACTATGCCAAAGGCGAAATAGCCGCCGGCGAGGAGATTGTGATCGAGAGCATTT
TGGGCCGCCATAGCACATTTAGCGGGCGGGTGGTGGATTGTACCCAGGTCGGTTCGTACCCCGCCATTATCCCCGAAGTG
AGTGGCCGGGCATTTGTGATCGGGCGAAGCGAATTTATTGTCGATCCGCGTGATCCGTTAGGGAGTGGCTTTTTAGTCGC
GCAGATCGGATCGCCGTGA

Upstream 100 bases:

>100_bases
CCTTGTGCAACGACGTGCAAGCGACTACGCATACCCTCAGACAAGCAGGGGATGATCCGGTGCAACGTGCTGTTTCTGTT
AGAGAAGGGAGATGGATTCC

Downstream 100 bases:

>100_bases
TGTAGCACAGCGACGAGCGCACCGACCGCACTTGATAGGTGTGGTCGGTGCAGAAGCAACACCCATCACCAATCCTGACC
TGCGTTCAGGGAAGCTGGCT

Product: proline racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MKLDWDRLRFPPDTLRLTTIETHAAGEPLRIVTGGLPDIIGTTILERRRFMRDHLDHVRRALMWEPRGHFNMYGCVITPP
VSAEADAGVLFMHNEGYSTMCGHGVIALVTVLVESGAVVGEGDQAMVTLDTPAGLVKATAHLESGRVIRVSFRNVPSFVY
ARDLQVDVPGYGQVVCDVAWGGAFYAVLPAAQLGLRVTPEQTAALVVAGEAIKRAVSDVLPLHHPHDPDLGFLYGTILTD
QPEDAAHHSRNICVFANAEVDRSPTGTGVSARLAIHYAKGEIAAGEEIVIESILGRHSTFSGRVVDCTQVGSYPAIIPEV
SGRAFVIGRSEFIVDPRDPLGSGFLVAQIGSP

Sequences:

>Translated_352_residues
MKLDWDRLRFPPDTLRLTTIETHAAGEPLRIVTGGLPDIIGTTILERRRFMRDHLDHVRRALMWEPRGHFNMYGCVITPP
VSAEADAGVLFMHNEGYSTMCGHGVIALVTVLVESGAVVGEGDQAMVTLDTPAGLVKATAHLESGRVIRVSFRNVPSFVY
ARDLQVDVPGYGQVVCDVAWGGAFYAVLPAAQLGLRVTPEQTAALVVAGEAIKRAVSDVLPLHHPHDPDLGFLYGTILTD
QPEDAAHHSRNICVFANAEVDRSPTGTGVSARLAIHYAKGEIAAGEEIVIESILGRHSTFSGRVVDCTQVGSYPAIIPEV
SGRAFVIGRSEFIVDPRDPLGSGFLVAQIGSP
>Mature_352_residues
MKLDWDRLRFPPDTLRLTTIETHAAGEPLRIVTGGLPDIIGTTILERRRFMRDHLDHVRRALMWEPRGHFNMYGCVITPP
VSAEADAGVLFMHNEGYSTMCGHGVIALVTVLVESGAVVGEGDQAMVTLDTPAGLVKATAHLESGRVIRVSFRNVPSFVY
ARDLQVDVPGYGQVVCDVAWGGAFYAVLPAAQLGLRVTPEQTAALVVAGEAIKRAVSDVLPLHHPHDPDLGFLYGTILTD
QPEDAAHHSRNICVFANAEVDRSPTGTGVSARLAIHYAKGEIAAGEEIVIESILGRHSTFSGRVVDCTQVGSYPAIIPEV
SGRAFVIGRSEFIVDPRDPLGSGFLVAQIGSP

Specific function: Unknown

COG id: COG3938

COG function: function code E; Proline racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline racemase family [H]

Homologues:

Organism=Homo sapiens, GI21389361, Length=340, Percent_Identity=47.0588235294118, Blast_Score=294, Evalue=7e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008794 [H]

Pfam domain/function: PF05544 Pro_racemase [H]

EC number: NA

Molecular weight: Translated: 37869; Mature: 37869

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDWDRLRFPPDTLRLTTIETHAAGEPLRIVTGGLPDIIGTTILERRRFMRDHLDHVRR
CCCCCHHHCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
ALMWEPRGHFNMYGCVITPPVSAEADAGVLFMHNEGYSTMCGHGVIALVTVLVESGAVVG
HHCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCHHCCHHHHHHHHHHHCCCEEE
EGDQAMVTLDTPAGLVKATAHLESGRVIRVSFRNVPSFVYARDLQVDVPGYGQVVCDVAW
CCCCEEEEEECCCCHHEEEEECCCCCEEEEEECCCCCEEEEEEEEEECCCCCEEEEEEEC
GGAFYAVLPAAQLGLRVTPEQTAALVVAGEAIKRAVSDVLPLHHPHDPDLGFLYGTILTD
CCCHHHHHHHHHHCEEECCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCEEEEEEEECC
QPEDAAHHSRNICVFANAEVDRSPTGTGVSARLAIHYAKGEIAAGEEIVIESILGRHSTF
CCCHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHCCCCCC
SGRVVDCTQVGSYPAIIPEVSGRAFVIGRSEFIVDPRDPLGSGFLVAQIGSP
CCCEEEEECCCCCCEEEECCCCCEEEEECCEEEECCCCCCCCCEEEEECCCC
>Mature Secondary Structure
MKLDWDRLRFPPDTLRLTTIETHAAGEPLRIVTGGLPDIIGTTILERRRFMRDHLDHVRR
CCCCCHHHCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
ALMWEPRGHFNMYGCVITPPVSAEADAGVLFMHNEGYSTMCGHGVIALVTVLVESGAVVG
HHCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCHHCCHHHHHHHHHHHCCCEEE
EGDQAMVTLDTPAGLVKATAHLESGRVIRVSFRNVPSFVYARDLQVDVPGYGQVVCDVAW
CCCCEEEEEECCCCHHEEEEECCCCCEEEEEECCCCCEEEEEEEEEECCCCCEEEEEEEC
GGAFYAVLPAAQLGLRVTPEQTAALVVAGEAIKRAVSDVLPLHHPHDPDLGFLYGTILTD
CCCHHHHHHHHHHCEEECCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCEEEEEEEECC
QPEDAAHHSRNICVFANAEVDRSPTGTGVSARLAIHYAKGEIAAGEEIVIESILGRHSTF
CCCHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHCCCCCC
SGRVVDCTQVGSYPAIIPEVSGRAFVIGRSEFIVDPRDPLGSGFLVAQIGSP
CCCEEEEECCCCCCEEEECCCCCEEEEECCEEEECCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629 [H]