| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526088
Identifier: 222526088
GI number: 222526088
Start: 3510690
End: 3511757
Strand: Direct
Name: 222526088
Synonym: Chy400_2845
Alternate gene names: NA
Gene position: 3510690-3511757 (Clockwise)
Preceding gene: 222526087
Following gene: 222526089
Centisome position: 66.63
GC content: 57.12
Gene sequence:
>1068_bases ATGACAACTCCGGTCTGGCCACCTGTATTCGACGGACATAATGACGTTATTCTCGACCTTTACCGCCCTAAACCCGGTGA AGAACGCGACTTCTTTCACGCCAGCCCCTACGGTCATCTCGATCTGCCTCGTGCGCGGGCTGGTGGGTTTGGTGGCGGCT TTTTTGCCATCTACGTCCCACCACCACCTGCGCCCAAACCACCACCAGAACACATTCCCTCGCCACCGTACTATATGCCA TTGCCGCCACCACTCGAACATAGCTACGCCTTACACACGACGATGGCAATGGCCGCACGCCTCTTCCGCATCGAAGCCGA GTCCAACGGCCAGTTTCGCATCTGTCGTACTGCTGATGACATTCATGCCTGCCTGACGAATGGTATTGTGGCAGTCGTTT TCCACATTGAAGGTGCTGAAGCGATTGGCCCCGATCTCGACGAACTAGAGGTACTCTATCAGGCGGGCTTGCGCTCGCTA GGGCCGGTCTGGAGCCGTCCCAATATCTTTGGGCACGGCGTGCCGTTTGCGTTTCCCGCTTCACCCGATACCGGACCCGG TCTGACCGACGCCGGTAAAGCGCTGGTCAAGGCGTGCAATCAACTACGCATCCTGATCGATCTCTCGCATTTGAACGAAG CCGGTTTTTGGGACGTTGCCCGGCTAAGCACGGCACCGTTGGTGGCTACGCATTCCAATGCGCATGCTATCTGCCCCAGT AGTCGGAATCTTACTGATCGTCAGCTCGATGCCATTCGCGACTCGGATGGCATGGTCGGACTGAATTTTGCCGTCACGTT TTTGCGCCCTGACGGGCACCGTGATGCTGATACGCCGGTTTCGATTATGGTGCGGCATGTGCAGTATCTGGTTGAACGCC TGGGTATTGACCGGGTAGGTTTTGGTTCAGATTTCGACGGTGCCTTGATCCCGCAGGCCATTCGCGACGTAAGCGGTTTA CCGGTACTCTTGCAGGCGCTGGCCGATGCCGGCTTTACACCGGCAGAACTACGCAAGCTGGCCTACGAAAACTGGTTGCG CGTATTGCGGTTGACCTGGGGCGCATAA
Upstream 100 bases:
>100_bases GGTGATATGCTGTGCGGTCAGGGGCGTGTCCATCTCGCTATCGAGAGCGGTTGGCGCGCTGCGACGCGCATCCGCGAAGT TGTATCGTGAGGATACCTGT
Downstream 100 bases:
>100_bases CGTGATCACATCGTGAGTAGACATCAATACCAGACAATCACAGCTAAGGAGAGTACATTCCCGCTATGCAACATCTGCAT CCGATTGAGCAACGAGTGCT
Product: Membrane dipeptidase
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTTPVWPPVFDGHNDVILDLYRPKPGEERDFFHASPYGHLDLPRARAGGFGGGFFAIYVPPPPAPKPPPEHIPSPPYYMP LPPPLEHSYALHTTMAMAARLFRIEAESNGQFRICRTADDIHACLTNGIVAVVFHIEGAEAIGPDLDELEVLYQAGLRSL GPVWSRPNIFGHGVPFAFPASPDTGPGLTDAGKALVKACNQLRILIDLSHLNEAGFWDVARLSTAPLVATHSNAHAICPS SRNLTDRQLDAIRDSDGMVGLNFAVTFLRPDGHRDADTPVSIMVRHVQYLVERLGIDRVGFGSDFDGALIPQAIRDVSGL PVLLQALADAGFTPAELRKLAYENWLRVLRLTWGA
Sequences:
>Translated_355_residues MTTPVWPPVFDGHNDVILDLYRPKPGEERDFFHASPYGHLDLPRARAGGFGGGFFAIYVPPPPAPKPPPEHIPSPPYYMP LPPPLEHSYALHTTMAMAARLFRIEAESNGQFRICRTADDIHACLTNGIVAVVFHIEGAEAIGPDLDELEVLYQAGLRSL GPVWSRPNIFGHGVPFAFPASPDTGPGLTDAGKALVKACNQLRILIDLSHLNEAGFWDVARLSTAPLVATHSNAHAICPS SRNLTDRQLDAIRDSDGMVGLNFAVTFLRPDGHRDADTPVSIMVRHVQYLVERLGIDRVGFGSDFDGALIPQAIRDVSGL PVLLQALADAGFTPAELRKLAYENWLRVLRLTWGA >Mature_354_residues TTPVWPPVFDGHNDVILDLYRPKPGEERDFFHASPYGHLDLPRARAGGFGGGFFAIYVPPPPAPKPPPEHIPSPPYYMPL PPPLEHSYALHTTMAMAARLFRIEAESNGQFRICRTADDIHACLTNGIVAVVFHIEGAEAIGPDLDELEVLYQAGLRSLG PVWSRPNIFGHGVPFAFPASPDTGPGLTDAGKALVKACNQLRILIDLSHLNEAGFWDVARLSTAPLVATHSNAHAICPSS RNLTDRQLDAIRDSDGMVGLNFAVTFLRPDGHRDADTPVSIMVRHVQYLVERLGIDRVGFGSDFDGALIPQAIRDVSGLP VLLQALADAGFTPAELRKLAYENWLRVLRLTWGA
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI189458885, Length=352, Percent_Identity=30.1136363636364, Blast_Score=145, Evalue=7e-35, Organism=Homo sapiens, GI4758190, Length=352, Percent_Identity=30.1136363636364, Blast_Score=145, Evalue=7e-35, Organism=Homo sapiens, GI11641269, Length=347, Percent_Identity=27.0893371757925, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI193211608, Length=355, Percent_Identity=24.5070422535211, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI193211610, Length=355, Percent_Identity=24.5070422535211, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI221475880, Length=355, Percent_Identity=27.887323943662, Blast_Score=141, Evalue=7e-34, Organism=Drosophila melanogaster, GI281362638, Length=356, Percent_Identity=28.3707865168539, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI281362636, Length=356, Percent_Identity=28.3707865168539, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI161083233, Length=355, Percent_Identity=25.6338028169014, Blast_Score=105, Evalue=6e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 38735; Mature: 38603
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS00869 RENAL_DIPEPTIDASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPVWPPVFDGHNDVILDLYRPKPGEERDFFHASPYGHLDLPRARAGGFGGGFFAIYVP CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCHHHCCCCCCCEEEEEEC PPPAPKPPPEHIPSPPYYMPLPPPLEHSYALHTTMAMAARLFRIEAESNGQFRICRTADD CCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCEEEEECHHH IHACLTNGIVAVVFHIEGAEAIGPDLDELEVLYQAGLRSLGPVWSRPNIFGHGVPFAFPA HHHHHHCCEEEEEEEECCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECC SPDTGPGLTDAGKALVKACNQLRILIDLSHLNEAGFWDVARLSTAPLVATHSNAHAICPS CCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCCHHHHHCCCCEEEECCCCEEECCC SRNLTDRQLDAIRDSDGMVGLNFAVTFLRPDGHRDADTPVSIMVRHVQYLVERLGIDRVG CCCCCHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC FGSDFDGALIPQAIRDVSGLPVLLQALADAGFTPAELRKLAYENWLRVLRLTWGA CCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTPVWPPVFDGHNDVILDLYRPKPGEERDFFHASPYGHLDLPRARAGGFGGGFFAIYVP CCCCCCCCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCHHHCCCCCCCEEEEEEC PPPAPKPPPEHIPSPPYYMPLPPPLEHSYALHTTMAMAARLFRIEAESNGQFRICRTADD CCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCEEEEECHHH IHACLTNGIVAVVFHIEGAEAIGPDLDELEVLYQAGLRSLGPVWSRPNIFGHGVPFAFPA HHHHHHCCEEEEEEEECCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECC SPDTGPGLTDAGKALVKACNQLRILIDLSHLNEAGFWDVARLSTAPLVATHSNAHAICPS CCCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCCHHHHHCCCCEEEECCCCEEECCC SRNLTDRQLDAIRDSDGMVGLNFAVTFLRPDGHRDADTPVSIMVRHVQYLVERLGIDRVG CCCCCHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC FGSDFDGALIPQAIRDVSGLPVLLQALADAGFTPAELRKLAYENWLRVLRLTWGA CCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]