| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526077
Identifier: 222526077
GI number: 222526077
Start: 3497797
End: 3498267
Strand: Direct
Name: 222526077
Synonym: Chy400_2834
Alternate gene names: NA
Gene position: 3497797-3498267 (Clockwise)
Preceding gene: 222526075
Following gene: 222526078
Centisome position: 66.39
GC content: 56.9
Gene sequence:
>471_bases ATGAAACAACACGAAGCTCGTTCACATTTGCCACATCAGCTTATCCATGACGTGTACGTGCTGCTTGACGATGGCGACCG GCGAGCATTGTCACACGTCAATTTGACCCCGCTCGAGTTTAATTTGTTGCTCCAGTTAGACCTTGAGCAGGGGCAACGAC TGACTGATGTTGGCGCCAAACTGCTCTGTGTTAAGAGCACCATTACGCGGTTGGTGGATCGCCTCGAACGCGACGGTTTG GTCAAGCGCAATCCCGATCCTGATGATCGGCGGGCACAGCGGCTGATCCTGACGCCACGCGGAGCCGCAGTGCGTGCCGA GGCGCTGGCAATGCACAATGCGGCTGTCGAGCGCCGGATGGGCTTGCTCGATGAGCAGGAACAGGAGCAGTTAACACGAC TACTGCTCAAGCTGCGTGATGGATTGGCCGCCGATCTGGCCGCCCAGCAGACTGTTGAAGCTGAGTCATAA
Upstream 100 bases:
>100_bases GCATATTCACCTAAAATACTATTTCATCACTTGTCACCCCCTCAAAAGAGCAGTATACTGCTTGCAAAGAAAACGGTTGC ACATGTGCAGGTTTACTATT
Downstream 100 bases:
>100_bases TATTTGCCATACATCGTGCGCACCTTTGCCTGGGTCTGAACGGTATCTTTTATAGTACCGCGTTTTTGACAACAGGCAAA GCGATGAATCTGATTCGACT
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: MarR Family Transcriptional Regulator
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MKQHEARSHLPHQLIHDVYVLLDDGDRRALSHVNLTPLEFNLLLQLDLEQGQRLTDVGAKLLCVKSTITRLVDRLERDGL VKRNPDPDDRRAQRLILTPRGAAVRAEALAMHNAAVERRMGLLDEQEQEQLTRLLLKLRDGLAADLAAQQTVEAES
Sequences:
>Translated_156_residues MKQHEARSHLPHQLIHDVYVLLDDGDRRALSHVNLTPLEFNLLLQLDLEQGQRLTDVGAKLLCVKSTITRLVDRLERDGL VKRNPDPDDRRAQRLILTPRGAAVRAEALAMHNAAVERRMGLLDEQEQEQLTRLLLKLRDGLAADLAAQQTVEAES >Mature_156_residues MKQHEARSHLPHQLIHDVYVLLDDGDRRALSHVNLTPLEFNLLLQLDLEQGQRLTDVGAKLLCVKSTITRLVDRLERDGL VKRNPDPDDRRAQRLILTPRGAAVRAEALAMHNAAVERRMGLLDEQEQEQLTRLLLKLRDGLAADLAAQQTVEAES
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17646; Mature: 17646
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQHEARSHLPHQLIHDVYVLLDDGDRRALSHVNLTPLEFNLLLQLDLEQGQRLTDVGAK CCCCCHHHCCHHHHHHHHEEEECCCCCHHHHHCCCCCEEEEEEEEEEHHCCCCHHHHHHH LLCVKSTITRLVDRLERDGLVKRNPDPDDRRAQRLILTPRGAAVRAEALAMHNAAVERRM HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHH GLLDEQEQEQLTRLLLKLRDGLAADLAAQQTVEAES CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC >Mature Secondary Structure MKQHEARSHLPHQLIHDVYVLLDDGDRRALSHVNLTPLEFNLLLQLDLEQGQRLTDVGAK CCCCCHHHCCHHHHHHHHEEEECCCCCHHHHHCCCCCEEEEEEEEEEHHCCCCHHHHHHH LLCVKSTITRLVDRLERDGLVKRNPDPDDRRAQRLILTPRGAAVRAEALAMHNAAVERRM HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHH GLLDEQEQEQLTRLLLKLRDGLAADLAAQQTVEAES CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA