| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526056
Identifier: 222526056
GI number: 222526056
Start: 3466869
End: 3468125
Strand: Direct
Name: 222526056
Synonym: Chy400_2813
Alternate gene names: NA
Gene position: 3466869-3468125 (Clockwise)
Preceding gene: 222526051
Following gene: 222526057
Centisome position: 65.8
GC content: 57.76
Gene sequence:
>1257_bases GTGACCAATCCGCGCACGAATTACGCTCTGGCGGGAGCAGCACTCTTCAACCCGATGGCGGCGATGTACTGGCTTGATGT GATGCGCGGTCAACGTCCTGGTGCGGGACTCCTGCTGGTCAGTACAACAGGTGCTGTGTGTGCGGGATTAGTGGCTGAAC CGCGGCGGCATCCATGGCGGGCGCTCGCGAGTGGTCTGGCAGCCGCAGCCGGGGCAGCGCTGGCCGGTTGGGTGCTGCGG CGCTACGTGGATTGGGTGACTGAAGCAGCGGATGTTGATGCACCTGCGCCGAATGCCCACGATCTGCTCTTGCCGGCAGC AGCGGTGTGTGCCGGTACGGTTGGCCTCTCTGCCCTGGTTGGACGCGAGCCTGAGCGTTATATCGAATATAGCGGTAAAC ACGGTGATTACCGCTGGATTTCCGCCATCCCCCATCCGGCACAGCGCTGGCTGGCCTGGAGTGGATACCTGCTGCATCAG TTCGCGATCTGGGGGTGTATCTACGCTGCTCAACACCAGCGCTTGCCTTACACTACTGCTATGAAGCGACTCAACTGGAT TGCGCTGGCCGTTAATGCTGGTGGTGTGGCCCTGCACTATCTCCAGTCGCACTATACCTACGACGGATTGGCGCGTGATG TGCCTGAAGGGAGTGCGCTTGGCTCTGTTGCGTTCATCTTGATGTTGACGCTGGCGCTTGAGGCACCCCGGCGTGGTCTT TTCTTCGGCAGTCGGCGGGTCTTGCCACCACCTGAGTTAGTCCGCTTTGCCCGGCGCTTTCACGGTTATATCTTCTCGTG GGCATCGACGTACAATTTCTGGTATCATCCTATCGATCCGAAACCGCTGCATTACACCGGTCTCTTTCACACCCTCCTGC TCTTTGTGCAATCGGCACTGATCTACACAAAAGCGCATCGCGACCCGCGCTGGACACTGGTACTGGAGTTGATGGTGCTG CCACATGCAGTTGTTTCAACTCTCTACAAGCGGAGCGGGTTGGGTGCAATGTTTACCTTCAGCCTGCTCGCGATGTTCGT CATTAATCAGATGCACGGCCTGGGACTCTCGCAACGAGCGCGGTGGACAATCGGTGCCGCGTATGCAACAACCGCATTGA CCTATTGCGGTGTACGTCGTGAGTGGCATCGTTTACCTGATATTCTGCGCATACCGATTCTTGAATATGGAGTGCTGGGC ATTTTAGTCTTGCTGTCGCTACTCATGCGGGTAGTGCGTCAGTCTAAAGAGCGATAG
Upstream 100 bases:
>100_bases CTCCTGAACCTTCAACCTTCTCGCACGCTGCAAGTGTGGTATGATATGTCATCATTTTGCACATACTGTTAACAGTTCGT GCCTTGAGAGGAGGCCAGCC
Downstream 100 bases:
>100_bases CTTGCCAACAAGACCTGGAACGTCGCTCAGCAAACTTGCTATTACGATGCCTTGCTGTAGTACAGGCAGGTATTTACAGC GTACATGAAGCAACGTATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MTNPRTNYALAGAALFNPMAAMYWLDVMRGQRPGAGLLLVSTTGAVCAGLVAEPRRHPWRALASGLAAAAGAALAGWVLR RYVDWVTEAADVDAPAPNAHDLLLPAAAVCAGTVGLSALVGREPERYIEYSGKHGDYRWISAIPHPAQRWLAWSGYLLHQ FAIWGCIYAAQHQRLPYTTAMKRLNWIALAVNAGGVALHYLQSHYTYDGLARDVPEGSALGSVAFILMLTLALEAPRRGL FFGSRRVLPPPELVRFARRFHGYIFSWASTYNFWYHPIDPKPLHYTGLFHTLLLFVQSALIYTKAHRDPRWTLVLELMVL PHAVVSTLYKRSGLGAMFTFSLLAMFVINQMHGLGLSQRARWTIGAAYATTALTYCGVRREWHRLPDILRIPILEYGVLG ILVLLSLLMRVVRQSKER
Sequences:
>Translated_418_residues MTNPRTNYALAGAALFNPMAAMYWLDVMRGQRPGAGLLLVSTTGAVCAGLVAEPRRHPWRALASGLAAAAGAALAGWVLR RYVDWVTEAADVDAPAPNAHDLLLPAAAVCAGTVGLSALVGREPERYIEYSGKHGDYRWISAIPHPAQRWLAWSGYLLHQ FAIWGCIYAAQHQRLPYTTAMKRLNWIALAVNAGGVALHYLQSHYTYDGLARDVPEGSALGSVAFILMLTLALEAPRRGL FFGSRRVLPPPELVRFARRFHGYIFSWASTYNFWYHPIDPKPLHYTGLFHTLLLFVQSALIYTKAHRDPRWTLVLELMVL PHAVVSTLYKRSGLGAMFTFSLLAMFVINQMHGLGLSQRARWTIGAAYATTALTYCGVRREWHRLPDILRIPILEYGVLG ILVLLSLLMRVVRQSKER >Mature_417_residues TNPRTNYALAGAALFNPMAAMYWLDVMRGQRPGAGLLLVSTTGAVCAGLVAEPRRHPWRALASGLAAAAGAALAGWVLRR YVDWVTEAADVDAPAPNAHDLLLPAAAVCAGTVGLSALVGREPERYIEYSGKHGDYRWISAIPHPAQRWLAWSGYLLHQF AIWGCIYAAQHQRLPYTTAMKRLNWIALAVNAGGVALHYLQSHYTYDGLARDVPEGSALGSVAFILMLTLALEAPRRGLF FGSRRVLPPPELVRFARRFHGYIFSWASTYNFWYHPIDPKPLHYTGLFHTLLLFVQSALIYTKAHRDPRWTLVLELMVLP HAVVSTLYKRSGLGAMFTFSLLAMFVINQMHGLGLSQRARWTIGAAYATTALTYCGVRREWHRLPDILRIPILEYGVLGI LVLLSLLMRVVRQSKER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46557; Mature: 46426
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPRTNYALAGAALFNPMAAMYWLDVMRGQRPGAGLLLVSTTGAVCAGLVAEPRRHPWR CCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCHHH ALASGLAAAAGAALAGWVLRRYVDWVTEAADVDAPAPNAHDLLLPAAAVCAGTVGLSALV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GREPERYIEYSGKHGDYRWISAIPHPAQRWLAWSGYLLHQFAIWGCIYAAQHQRLPYTTA CCCCHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH MKRLNWIALAVNAGGVALHYLQSHYTYDGLARDVPEGSALGSVAFILMLTLALEAPRRGL HHHHCEEEEEECCCCHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC FFGSRRVLPPPELVRFARRFHGYIFSWASTYNFWYHPIDPKPLHYTGLFHTLLLFVQSAL EECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHH IYTKAHRDPRWTLVLELMVLPHAVVSTLYKRSGLGAMFTFSLLAMFVINQMHGLGLSQRA HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC RWTIGAAYATTALTYCGVRREWHRLPDILRIPILEYGVLGILVLLSLLMRVVRQSKER CEEEHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TNPRTNYALAGAALFNPMAAMYWLDVMRGQRPGAGLLLVSTTGAVCAGLVAEPRRHPWR CCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCHHH ALASGLAAAAGAALAGWVLRRYVDWVTEAADVDAPAPNAHDLLLPAAAVCAGTVGLSALV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GREPERYIEYSGKHGDYRWISAIPHPAQRWLAWSGYLLHQFAIWGCIYAAQHQRLPYTTA CCCCHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH MKRLNWIALAVNAGGVALHYLQSHYTYDGLARDVPEGSALGSVAFILMLTLALEAPRRGL HHHHCEEEEEECCCCHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC FFGSRRVLPPPELVRFARRFHGYIFSWASTYNFWYHPIDPKPLHYTGLFHTLLLFVQSAL EECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHH IYTKAHRDPRWTLVLELMVLPHAVVSTLYKRSGLGAMFTFSLLAMFVINQMHGLGLSQRA HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC RWTIGAAYATTALTYCGVRREWHRLPDILRIPILEYGVLGILVLLSLLMRVVRQSKER CEEEHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA