| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is hemA [H]
Identifier: 222526045
GI number: 222526045
Start: 3453168
End: 3454472
Strand: Direct
Name: hemA [H]
Synonym: Chy400_2802
Alternate gene names: 222526045
Gene position: 3453168-3454472 (Clockwise)
Preceding gene: 222526044
Following gene: 222526046
Centisome position: 65.54
GC content: 58.85
Gene sequence:
>1305_bases ATGAATCTGTTCCTTGCCGGTCTCGATCATACGACTGCGCCGGTTGAGATTCGCGAACAACTTGCCTTCAGCCAGACTGA TTTGCCTTCAGCCCTGATGCAATTGACCAGTTCAGAAACCGGCACGCCGCCGCTCTTTGCCGAGGCCGTGATTCTTTCGA CCTGCAATCGAGTTGAATTGTACGGTGTAACGAACCCTGGAACGACGGCCCAACACGTTGTCGATTTTCTGGCCGCTTTT CACCGTCGTCCAGCCGCGAGCTTTGTCCACACGCTCTATTTTTACCAGGGTGAAGCCGTTGCCCGTCATTTGTGTGCAAC TGCCGCCGGGTTACGTTCGCTGGTTTTGGGAGAGGCCCAAATTCAGGGTCAGGTGCGCAATGCCTACGAAGCGGCGCAAC GGATCGGCAGTGTCGGTTCGATCTTGCACCGTCTGTTTCAGATTGCCCTGGTCGCCGGGAAACGGGTGCGCCACGAAACG ACTATCGGGAAAGGGGCGGCGAGTGTTTCGCAGGCCGGTGTTGAGCTTGCCCGTCGTCGGCTCGGTGATCTACGGGGCCG TGAGGTGTTGTTGATCGGCGGCGGTGAGGTGAGCGAGCTTGCCGCCCAGAATCTGATCGCCAACGGTGCTGATCGATTGA CGATTGTCAATCGCACGTCGGCGCGTGCTGCCGCCCTGGCCGAACGCTACGGTGCTGAGATGCTTGATTTCGGTGCTCTA CCCCAGGCGTTGGCCCGCGCCGACATTGTCATTAGCTCGACCGCAGCACCGGTACCGATTATTTACCGCCATCACGTGGC CGAGGCGATTGCCCATAAACAGCGGGCTCGCGCCTGTGGTGAGTGCGATCCGCCGACGATGTTGTTGATCGATCTGGCCG TGCCCCGCGACATTGCGGCTGATGTCGCCCAGATTCCCGGTGTACACCTCTTCACGGTTGATGATCTGCGTGAGGTTGTG AGTCATACGATTGAGTTGCGGAGCGCAGTCCTGGAGATTGCCCAACAGATTGTTGAAGAGCAGGTGCAGGAGTTTCTGTC CTGGATGCGTACCCAGGAGGCCCTGCCGGTACTGACAATGTTGCGCCAGCGGGCTGAGGAGGTACGGAATGAGGAACTGG CCCGTGCCTTGCGTCGCTTGCACGATCTCTCACCCGAACAGCGGGCAGTCATTGAAGGGCTGTCGCGGAGTATCGTGAAC AAGCTGTTGCACCCGCCTACCCGTTGCCTGCGCGAAGCCGCCGCGCATGGTCAGGGCAAACGCTATGCTTCCATTCTGGC CGAACTCTTTAATCTGGAGCATTGA
Upstream 100 bases:
>100_bases CGGGCGGGCGGGGTTTTTGTCGCCATCCGCCTGTCTGGATACAATGGTTCACCATTCGGTGTCTTGCCGTGAGCATTTTG CAAAGCAAAGGATCAGGAGT
Downstream 100 bases:
>100_bases GAGGAGTTATGGCACGTTTATTGCTTGGTACTCGTGGTTCGGCACTTGCCCGTGTTCAGTCCGTGTGGGTTGCCGACGCG CTCCGCACGGCCTTTCCCTC
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR [H]
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MNLFLAGLDHTTAPVEIREQLAFSQTDLPSALMQLTSSETGTPPLFAEAVILSTCNRVELYGVTNPGTTAQHVVDFLAAF HRRPAASFVHTLYFYQGEAVARHLCATAAGLRSLVLGEAQIQGQVRNAYEAAQRIGSVGSILHRLFQIALVAGKRVRHET TIGKGAASVSQAGVELARRRLGDLRGREVLLIGGGEVSELAAQNLIANGADRLTIVNRTSARAAALAERYGAEMLDFGAL PQALARADIVISSTAAPVPIIYRHHVAEAIAHKQRARACGECDPPTMLLIDLAVPRDIAADVAQIPGVHLFTVDDLREVV SHTIELRSAVLEIAQQIVEEQVQEFLSWMRTQEALPVLTMLRQRAEEVRNEELARALRRLHDLSPEQRAVIEGLSRSIVN KLLHPPTRCLREAAAHGQGKRYASILAELFNLEH
Sequences:
>Translated_434_residues MNLFLAGLDHTTAPVEIREQLAFSQTDLPSALMQLTSSETGTPPLFAEAVILSTCNRVELYGVTNPGTTAQHVVDFLAAF HRRPAASFVHTLYFYQGEAVARHLCATAAGLRSLVLGEAQIQGQVRNAYEAAQRIGSVGSILHRLFQIALVAGKRVRHET TIGKGAASVSQAGVELARRRLGDLRGREVLLIGGGEVSELAAQNLIANGADRLTIVNRTSARAAALAERYGAEMLDFGAL PQALARADIVISSTAAPVPIIYRHHVAEAIAHKQRARACGECDPPTMLLIDLAVPRDIAADVAQIPGVHLFTVDDLREVV SHTIELRSAVLEIAQQIVEEQVQEFLSWMRTQEALPVLTMLRQRAEEVRNEELARALRRLHDLSPEQRAVIEGLSRSIVN KLLHPPTRCLREAAAHGQGKRYASILAELFNLEH >Mature_434_residues MNLFLAGLDHTTAPVEIREQLAFSQTDLPSALMQLTSSETGTPPLFAEAVILSTCNRVELYGVTNPGTTAQHVVDFLAAF HRRPAASFVHTLYFYQGEAVARHLCATAAGLRSLVLGEAQIQGQVRNAYEAAQRIGSVGSILHRLFQIALVAGKRVRHET TIGKGAASVSQAGVELARRRLGDLRGREVLLIGGGEVSELAAQNLIANGADRLTIVNRTSARAAALAERYGAEMLDFGAL PQALARADIVISSTAAPVPIIYRHHVAEAIAHKQRARACGECDPPTMLLIDLAVPRDIAADVAQIPGVHLFTVDDLREVV SHTIELRSAVLEIAQQIVEEQVQEFLSWMRTQEALPVLTMLRQRAEEVRNEELARALRRLHDLSPEQRAVIEGLSRSIVN KLLHPPTRCLREAAAHGQGKRYASILAELFNLEH
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) [H]
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family [H]
Homologues:
Organism=Escherichia coli, GI1787461, Length=434, Percent_Identity=37.5576036866359, Blast_Score=266, Evalue=2e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000343 - InterPro: IPR015896 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR006151 [H]
Pfam domain/function: PF00745 GlutR_dimer; PF05201 GlutR_N; PF01488 Shikimate_DH [H]
EC number: =1.2.1.70 [H]
Molecular weight: Translated: 47297; Mature: 47297
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLFLAGLDHTTAPVEIREQLAFSQTDLPSALMQLTSSETGTPPLFAEAVILSTCNRVEL CCEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEE YGVTNPGTTAQHVVDFLAAFHRRPAASFVHTLYFYQGEAVARHLCATAAGLRSLVLGEAQ EECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQGQVRNAYEAAQRIGSVGSILHRLFQIALVAGKRVRHETTIGKGAASVSQAGVELARRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LGDLRGREVLLIGGGEVSELAAQNLIANGADRLTIVNRTSARAAALAERYGAEMLDFGAL HHCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCHHHHHHCCH PQALARADIVISSTAAPVPIIYRHHVAEAIAHKQRARACGECDPPTMLLIDLAVPRDIAA HHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHH DVAQIPGVHLFTVDDLREVVSHTIELRSAVLEIAQQIVEEQVQEFLSWMRTQEALPVLTM HHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRQRAEEVRNEELARALRRLHDLSPEQRAVIEGLSRSIVNKLLHPPTRCLREAAAHGQGK HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCH RYASILAELFNLEH HHHHHHHHHHCCCC >Mature Secondary Structure MNLFLAGLDHTTAPVEIREQLAFSQTDLPSALMQLTSSETGTPPLFAEAVILSTCNRVEL CCEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEE YGVTNPGTTAQHVVDFLAAFHRRPAASFVHTLYFYQGEAVARHLCATAAGLRSLVLGEAQ EECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQGQVRNAYEAAQRIGSVGSILHRLFQIALVAGKRVRHETTIGKGAASVSQAGVELARRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LGDLRGREVLLIGGGEVSELAAQNLIANGADRLTIVNRTSARAAALAERYGAEMLDFGAL HHCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCHHHHHHCCH PQALARADIVISSTAAPVPIIYRHHVAEAIAHKQRARACGECDPPTMLLIDLAVPRDIAA HHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHH DVAQIPGVHLFTVDDLREVVSHTIELRSAVLEIAQQIVEEQVQEFLSWMRTQEALPVLTM HHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRQRAEEVRNEELARALRRLHDLSPEQRAVIEGLSRSIVNKLLHPPTRCLREAAAHGQGK HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCH RYASILAELFNLEH HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA