Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222525929

Identifier: 222525929

GI number: 222525929

Start: 3318437

End: 3319006

Strand: Direct

Name: 222525929

Synonym: Chy400_2685

Alternate gene names: NA

Gene position: 3318437-3319006 (Clockwise)

Preceding gene: 222525927

Following gene: 222525930

Centisome position: 62.98

GC content: 57.02

Gene sequence:

>570_bases
ATGGCTTCTCAGAAACAGTCACTCACAATTGAACCGGCACTGCTTGGTTTGCTGCGTCAACAGCCGATGCACCCGTATGA
GCTGTTCCAGCAATTACAGCAGAAAAAGGCCCTTGGTTTTATCTGGCGGGTCAAGCAGAGTCATCTGTACGCATTGCTTG
ACCGGCTGGAAGCTGATGGATATCTGACGCATCAGCTTGAACTACAGGGGAGCCGGCCACCGCGCAAGATTCTCTCGCTC
ACGCCTGCGGGTGAAGCGCTCTTTGTTGCCTGGGTGACAACGCCGGTGGCGCATGGACGGGATATCCGGCTTGAATTTAT
GGCGAAGCTCTATTTTGCCTGCCACGAGGGGGCAGCGCAGGCCGGCCAACTGCTTGACCGTCAGTTAGCCTGTTGTCGGC
AGTGGCTGGCAGAGAATGAGCAGCGGATCGCCAGCTTACCTGTCAATTCGTTTGAGCGGCTCGTGCTACGCTATCGCTCC
GGGCAGTTACAGGCAACCGTGCTTTGGCTGGAAGAATGCCGGTATGAGTTGAACCAGCGGTGGAACCGGCAAGCGCAGGG
AGGCGTCTGA

Upstream 100 bases:

>100_bases
TATTCACATTGTGAATACTCAACACGAGAAGTATCGATGAGCGGATGCCGGTAATTCCCTTGGCAACTTGAACACCGGTA
GGGCCGATATACGCACAGAT

Downstream 100 bases:

>100_bases
TGGCACGCGGGTGGTGTGTGTTTCTGATGACGATACTCTTGTTGAGCAGTTGCAATGCCGAACAACCTGATACTGCCAGC
CTGACGATAGCCGCAGCCGC

Product: PadR-like family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator PadR-Like Family; Transcriptional Repressor PadR; Transcriptional Regulator; Transcriptional Regulator PadR Family Protein; Regulator Of Phenolic Acid Metabolism PadR

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MASQKQSLTIEPALLGLLRQQPMHPYELFQQLQQKKALGFIWRVKQSHLYALLDRLEADGYLTHQLELQGSRPPRKILSL
TPAGEALFVAWVTTPVAHGRDIRLEFMAKLYFACHEGAAQAGQLLDRQLACCRQWLAENEQRIASLPVNSFERLVLRYRS
GQLQATVLWLEECRYELNQRWNRQAQGGV

Sequences:

>Translated_189_residues
MASQKQSLTIEPALLGLLRQQPMHPYELFQQLQQKKALGFIWRVKQSHLYALLDRLEADGYLTHQLELQGSRPPRKILSL
TPAGEALFVAWVTTPVAHGRDIRLEFMAKLYFACHEGAAQAGQLLDRQLACCRQWLAENEQRIASLPVNSFERLVLRYRS
GQLQATVLWLEECRYELNQRWNRQAQGGV
>Mature_188_residues
ASQKQSLTIEPALLGLLRQQPMHPYELFQQLQQKKALGFIWRVKQSHLYALLDRLEADGYLTHQLELQGSRPPRKILSLT
PAGEALFVAWVTTPVAHGRDIRLEFMAKLYFACHEGAAQAGQLLDRQLACCRQWLAENEQRIASLPVNSFERLVLRYRSG
QLQATVLWLEECRYELNQRWNRQAQGGV

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21782; Mature: 21651

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQKQSLTIEPALLGLLRQQPMHPYELFQQLQQKKALGFIWRVKQSHLYALLDRLEADG
CCCCCCCCEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YLTHQLELQGSRPPRKILSLTPAGEALFVAWVTTPVAHGRDIRLEFMAKLYFACHEGAAQ
EEEEEEEECCCCCHHHHEEECCCCCEEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHH
AGQLLDRQLACCRQWLAENEQRIASLPVNSFERLVLRYRSGQLQATVLWLEECRYELNQR
HHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
WNRQAQGGV
HCCCCCCCC
>Mature Secondary Structure 
ASQKQSLTIEPALLGLLRQQPMHPYELFQQLQQKKALGFIWRVKQSHLYALLDRLEADG
CCCCCCCEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
YLTHQLELQGSRPPRKILSLTPAGEALFVAWVTTPVAHGRDIRLEFMAKLYFACHEGAAQ
EEEEEEEECCCCCHHHHEEECCCCCEEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHH
AGQLLDRQLACCRQWLAENEQRIASLPVNSFERLVLRYRSGQLQATVLWLEECRYELNQR
HHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
WNRQAQGGV
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA