| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525929
Identifier: 222525929
GI number: 222525929
Start: 3318437
End: 3319006
Strand: Direct
Name: 222525929
Synonym: Chy400_2685
Alternate gene names: NA
Gene position: 3318437-3319006 (Clockwise)
Preceding gene: 222525927
Following gene: 222525930
Centisome position: 62.98
GC content: 57.02
Gene sequence:
>570_bases ATGGCTTCTCAGAAACAGTCACTCACAATTGAACCGGCACTGCTTGGTTTGCTGCGTCAACAGCCGATGCACCCGTATGA GCTGTTCCAGCAATTACAGCAGAAAAAGGCCCTTGGTTTTATCTGGCGGGTCAAGCAGAGTCATCTGTACGCATTGCTTG ACCGGCTGGAAGCTGATGGATATCTGACGCATCAGCTTGAACTACAGGGGAGCCGGCCACCGCGCAAGATTCTCTCGCTC ACGCCTGCGGGTGAAGCGCTCTTTGTTGCCTGGGTGACAACGCCGGTGGCGCATGGACGGGATATCCGGCTTGAATTTAT GGCGAAGCTCTATTTTGCCTGCCACGAGGGGGCAGCGCAGGCCGGCCAACTGCTTGACCGTCAGTTAGCCTGTTGTCGGC AGTGGCTGGCAGAGAATGAGCAGCGGATCGCCAGCTTACCTGTCAATTCGTTTGAGCGGCTCGTGCTACGCTATCGCTCC GGGCAGTTACAGGCAACCGTGCTTTGGCTGGAAGAATGCCGGTATGAGTTGAACCAGCGGTGGAACCGGCAAGCGCAGGG AGGCGTCTGA
Upstream 100 bases:
>100_bases TATTCACATTGTGAATACTCAACACGAGAAGTATCGATGAGCGGATGCCGGTAATTCCCTTGGCAACTTGAACACCGGTA GGGCCGATATACGCACAGAT
Downstream 100 bases:
>100_bases TGGCACGCGGGTGGTGTGTGTTTCTGATGACGATACTCTTGTTGAGCAGTTGCAATGCCGAACAACCTGATACTGCCAGC CTGACGATAGCCGCAGCCGC
Product: PadR-like family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator PadR-Like Family; Transcriptional Repressor PadR; Transcriptional Regulator; Transcriptional Regulator PadR Family Protein; Regulator Of Phenolic Acid Metabolism PadR
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MASQKQSLTIEPALLGLLRQQPMHPYELFQQLQQKKALGFIWRVKQSHLYALLDRLEADGYLTHQLELQGSRPPRKILSL TPAGEALFVAWVTTPVAHGRDIRLEFMAKLYFACHEGAAQAGQLLDRQLACCRQWLAENEQRIASLPVNSFERLVLRYRS GQLQATVLWLEECRYELNQRWNRQAQGGV
Sequences:
>Translated_189_residues MASQKQSLTIEPALLGLLRQQPMHPYELFQQLQQKKALGFIWRVKQSHLYALLDRLEADGYLTHQLELQGSRPPRKILSL TPAGEALFVAWVTTPVAHGRDIRLEFMAKLYFACHEGAAQAGQLLDRQLACCRQWLAENEQRIASLPVNSFERLVLRYRS GQLQATVLWLEECRYELNQRWNRQAQGGV >Mature_188_residues ASQKQSLTIEPALLGLLRQQPMHPYELFQQLQQKKALGFIWRVKQSHLYALLDRLEADGYLTHQLELQGSRPPRKILSLT PAGEALFVAWVTTPVAHGRDIRLEFMAKLYFACHEGAAQAGQLLDRQLACCRQWLAENEQRIASLPVNSFERLVLRYRSG QLQATVLWLEECRYELNQRWNRQAQGGV
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21782; Mature: 21651
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASQKQSLTIEPALLGLLRQQPMHPYELFQQLQQKKALGFIWRVKQSHLYALLDRLEADG CCCCCCCCEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YLTHQLELQGSRPPRKILSLTPAGEALFVAWVTTPVAHGRDIRLEFMAKLYFACHEGAAQ EEEEEEEECCCCCHHHHEEECCCCCEEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHH AGQLLDRQLACCRQWLAENEQRIASLPVNSFERLVLRYRSGQLQATVLWLEECRYELNQR HHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH WNRQAQGGV HCCCCCCCC >Mature Secondary Structure ASQKQSLTIEPALLGLLRQQPMHPYELFQQLQQKKALGFIWRVKQSHLYALLDRLEADG CCCCCCCEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YLTHQLELQGSRPPRKILSLTPAGEALFVAWVTTPVAHGRDIRLEFMAKLYFACHEGAAQ EEEEEEEECCCCCHHHHEEECCCCCEEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHH AGQLLDRQLACCRQWLAENEQRIASLPVNSFERLVLRYRSGQLQATVLWLEECRYELNQR HHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH WNRQAQGGV HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA