Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222525883

Identifier: 222525883

GI number: 222525883

Start: 3271158

End: 3272156

Strand: Direct

Name: 222525883

Synonym: Chy400_2636

Alternate gene names: NA

Gene position: 3271158-3272156 (Clockwise)

Preceding gene: 222525882

Following gene: 222525886

Centisome position: 62.08

GC content: 63.96

Gene sequence:

>999_bases
ATGAACCCACCGACATGTGACGAACTGGATTATATCCACGTTCTGGTCGCAGCGCAGCACGTGTTCAGCAATACAGAAGC
AGCACGCTGCCATCCGGGAGCGCCCACGAACCGTCCGGCGCATGATGCCTACACGCGTCTGCTGCACCGGTGTCGTGCGG
ATGGCACTGCCGTGTGGGACGAGGTACGCCCCTGGGTGTCGTTGACCACGGGCTGCTTGATGATCGACGACACGACGCTG
GACAAGCCATATAGTCGGGCGATGGAGCTGGTTACCCGCCATTGGTCGGGGAAACATCAGCGGGTGGTGGTAGGTATCAA
TCTGATCAGGATGCTGTGGACTGATGGGAATGCCCACCTGCCCTGTGACTTCCGTATCGACGACAACGCCCACGATGGGT
TGACCAAGAACGACCACGTCCGGGCGATGGTGCAGGCGGCGGCCGCACGCGGGTTTCAGCCTCGCCTGCTTGCCGTCGCC
AGCTGGTATGCGAGCCTGGAGAACCTGACGCTGGTGCGCTCGCTGCCCTGGCAGTGGCTGACCCACCTGAACGCCAATCG
CCTGGGTGATCCTGATGGGTCGGGCAACCGACCGATCCGGGACGTCCCGATTCCGGCTGCGGGCACCATCGTGCATCTGA
AGGGCTATGGCGTCATCAAGGTGGTCGCGATAGCCACCCCAGCCGGTGGCAGTGACGACTGGGCCACGAGCGACCTGGCG
ATGCGTGCCGACCAGTGGGTGGAGGACGCCCGGTACCGGTGGCGGATCGAAGCGTACCATCGCGGGATCACGCAGGACTG
TGGCATTGAACGCGCCCAGCACCGCGCCGCTCGTGCCCAGCGGAATCACATCGGTCTGGCGCTGCGGGCCTTCCTCCGCC
TGGCATGTCACCGGTTGCGGACAGGCACGTCGTGGTTTGAGGCCACAGCCGCCATCGTCCGTGAGGCGATACGAGCCTAC
CTGGCTCATCCACGCTCTACCCAGCTCTCAACTGCGTAA

Upstream 100 bases:

>100_bases
TTCCCGATGAAGTATACGTGAGGCGATAAACCGTGTTCACACTTGTTGCACTTGTCGCTCCGTCTCCCGTGTTTCTGGCT
GATGATGGAGGTGTACGCTG

Downstream 100 bases:

>100_bases
CTCCTGATTGAAACAGCAGACAGGTCAAGATATTTTGATTTTTGGAAGTGGCACTCTTGTCAATTCGCTAATGCAATATG
ATCTTATTGATGAATATAGA

Product: transposase IS701 family protein

Products: NA

Alternate protein names: Transposase; IS4 Family Transposase

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MNPPTCDELDYIHVLVAAQHVFSNTEAARCHPGAPTNRPAHDAYTRLLHRCRADGTAVWDEVRPWVSLTTGCLMIDDTTL
DKPYSRAMELVTRHWSGKHQRVVVGINLIRMLWTDGNAHLPCDFRIDDNAHDGLTKNDHVRAMVQAAAARGFQPRLLAVA
SWYASLENLTLVRSLPWQWLTHLNANRLGDPDGSGNRPIRDVPIPAAGTIVHLKGYGVIKVVAIATPAGGSDDWATSDLA
MRADQWVEDARYRWRIEAYHRGITQDCGIERAQHRAARAQRNHIGLALRAFLRLACHRLRTGTSWFEATAAIVREAIRAY
LAHPRSTQLSTA

Sequences:

>Translated_332_residues
MNPPTCDELDYIHVLVAAQHVFSNTEAARCHPGAPTNRPAHDAYTRLLHRCRADGTAVWDEVRPWVSLTTGCLMIDDTTL
DKPYSRAMELVTRHWSGKHQRVVVGINLIRMLWTDGNAHLPCDFRIDDNAHDGLTKNDHVRAMVQAAAARGFQPRLLAVA
SWYASLENLTLVRSLPWQWLTHLNANRLGDPDGSGNRPIRDVPIPAAGTIVHLKGYGVIKVVAIATPAGGSDDWATSDLA
MRADQWVEDARYRWRIEAYHRGITQDCGIERAQHRAARAQRNHIGLALRAFLRLACHRLRTGTSWFEATAAIVREAIRAY
LAHPRSTQLSTA
>Mature_332_residues
MNPPTCDELDYIHVLVAAQHVFSNTEAARCHPGAPTNRPAHDAYTRLLHRCRADGTAVWDEVRPWVSLTTGCLMIDDTTL
DKPYSRAMELVTRHWSGKHQRVVVGINLIRMLWTDGNAHLPCDFRIDDNAHDGLTKNDHVRAMVQAAAARGFQPRLLAVA
SWYASLENLTLVRSLPWQWLTHLNANRLGDPDGSGNRPIRDVPIPAAGTIVHLKGYGVIKVVAIATPAGGSDDWATSDLA
MRADQWVEDARYRWRIEAYHRGITQDCGIERAQHRAARAQRNHIGLALRAFLRLACHRLRTGTSWFEATAAIVREAIRAY
LAHPRSTQLSTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37127; Mature: 37127

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPPTCDELDYIHVLVAAQHVFSNTEAARCHPGAPTNRPAHDAYTRLLHRCRADGTAVWD
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH
EVRPWVSLTTGCLMIDDTTLDKPYSRAMELVTRHWSGKHQRVVVGINLIRMLWTDGNAHL
HHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEHHEEEEHEEECCCCCC
PCDFRIDDNAHDGLTKNDHVRAMVQAAAARGFQPRLLAVASWYASLENLTLVRSLPWQWL
CEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
THLNANRLGDPDGSGNRPIRDVPIPAAGTIVHLKGYGVIKVVAIATPAGGSDDWATSDLA
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCHHHH
MRADQWVEDARYRWRIEAYHRGITQDCGIERAQHRAARAQRNHIGLALRAFLRLACHRLR
HHHHHHHHHHHHEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGTSWFEATAAIVREAIRAYLAHPRSTQLSTA
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNPPTCDELDYIHVLVAAQHVFSNTEAARCHPGAPTNRPAHDAYTRLLHRCRADGTAVWD
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHH
EVRPWVSLTTGCLMIDDTTLDKPYSRAMELVTRHWSGKHQRVVVGINLIRMLWTDGNAHL
HHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEHHEEEEHEEECCCCCC
PCDFRIDDNAHDGLTKNDHVRAMVQAAAARGFQPRLLAVASWYASLENLTLVRSLPWQWL
CEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH
THLNANRLGDPDGSGNRPIRDVPIPAAGTIVHLKGYGVIKVVAIATPAGGSDDWATSDLA
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCHHHH
MRADQWVEDARYRWRIEAYHRGITQDCGIERAQHRAARAQRNHIGLALRAFLRLACHRLR
HHHHHHHHHHHHEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGTSWFEATAAIVREAIRAYLAHPRSTQLSTA
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA