| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525882
Identifier: 222525882
GI number: 222525882
Start: 3270721
End: 3271086
Strand: Direct
Name: 222525882
Synonym: Chy400_2635
Alternate gene names: NA
Gene position: 3270721-3271086 (Clockwise)
Preceding gene: 222525881
Following gene: 222525883
Centisome position: 62.08
GC content: 43.17
Gene sequence:
>366_bases ATGAGAAAAATCGTTGTATCAATGTTCATGACGTTGGACGGTGTTATGGAAGCCCCAAATCAATGGTCTTTCCAGTTTGG GAGTGCAGAACAGCAGAAGTACAAATATGACGAACTCTTTGCTTGCGACGCTCTTCTTTTGGGACGAATAACCTATGAAG GGTTTGCAGCCGCCTGGCCAAACATGTCTGGCACAGGCGATTATGGCGTAAGAATGAACAGCATTCCCAAGTATGTTGTT TCTACAACCCTTCAAGAAGCCACGTGGAATAATTCAATAATCATCAGAAGCAATGTTTATGACGAACTATCAACATTGAT AGGAGTTACGCAGTTCCTTCCCGATGAAGTATACGTGAGGCGATAA
Upstream 100 bases:
>100_bases GCCTAATTCAGGCGTTGGGCGTTTCACACAAGTTTGCATATTGGTCTTATGCCTTAATCACCAAAACACATCTTTTAACA AGTAGAAAAGGAGAATTCAC
Downstream 100 bases:
>100_bases ACCGTGTTCACACTTGTTGCACTTGTCGCTCCGTCTCCCGTGTTTCTGGCTGATGATGGAGGTGTACGCTGATGAACCCA CCGACATGTGACGAACTGGA
Product: bifunctional deaminase-reductase domain-containing protein
Products: NA
Alternate protein names: Bifunctional Deaminase-Reductase Domain Protein; Deaminase-Reductase Domain-Containing Protein; Bifunctional Deaminase-Reductase-Like Protein; Pyrimidine Reductase Protein; Riboflavin Biosynthesis Protein; Dihydrofolate Reductase Protein; Pyrimidine Reductase; Riboflavin Biosynthesis Protein RibD C- Domain Protein; Riboflavin Biosynthesis RibD Domain-Containing Protein; Bifunctional Deaminase-Reductase-Like; RibD Family Protein; Riboflavin Biosynthesis Protein RibD; Secreted Protein
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MRKIVVSMFMTLDGVMEAPNQWSFQFGSAEQQKYKYDELFACDALLLGRITYEGFAAAWPNMSGTGDYGVRMNSIPKYVV STTLQEATWNNSIIIRSNVYDELSTLIGVTQFLPDEVYVRR
Sequences:
>Translated_121_residues MRKIVVSMFMTLDGVMEAPNQWSFQFGSAEQQKYKYDELFACDALLLGRITYEGFAAAWPNMSGTGDYGVRMNSIPKYVV STTLQEATWNNSIIIRSNVYDELSTLIGVTQFLPDEVYVRR >Mature_121_residues MRKIVVSMFMTLDGVMEAPNQWSFQFGSAEQQKYKYDELFACDALLLGRITYEGFAAAWPNMSGTGDYGVRMNSIPKYVV STTLQEATWNNSIIIRSNVYDELSTLIGVTQFLPDEVYVRR
Specific function: Unknown
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13798; Mature: 13798
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIVVSMFMTLDGVMEAPNQWSFQFGSAEQQKYKYDELFACDALLLGRITYEGFAAAWP CHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC NMSGTGDYGVRMNSIPKYVVSTTLQEATWNNSIIIRSNVYDELSTLIGVTQFLPDEVYVR CCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEC R C >Mature Secondary Structure MRKIVVSMFMTLDGVMEAPNQWSFQFGSAEQQKYKYDELFACDALLLGRITYEGFAAAWP CHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC NMSGTGDYGVRMNSIPKYVVSTTLQEATWNNSIIIRSNVYDELSTLIGVTQFLPDEVYVR CCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA