Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222525412
Identifier: 222525412
GI number: 222525412
Start: 2734847
End: 2735557
Strand: Direct
Name: 222525412
Synonym: Chy400_2157
Alternate gene names: NA
Gene position: 2734847-2735557 (Clockwise)
Preceding gene: 222525411
Following gene: 222525413
Centisome position: 51.9
GC content: 64.28
Gene sequence:
>711_bases ATGTACCGGTGTGACGTAGTCCCTGTCTTATCCATCCACGACCGGCTACAGCGCGTTAGTTTCTCTCCCTCAATATTCTG CTACGAGAGCAAGATTGACTTCCGCCCCCCTCCTTACCTATCCCCAGCGGGGGGAATTGTGGAGAGGCGCCCCCGCTGGG CGGAGGCATTCCCCCGCACTCAGCGGGGCTATGCATTACCCATAACGCGAATACTGCATTGCCCGCGTGCCGGAGCGGGT CGGGGGAGTGATGAAGAACGTGCTCCCCAGCCGGGAGCTGGGAGCGCGCGCCGGAGGCGCGCATGGTGCCGGTACCAGTG CTGGAGGGAGGAGCCAGGCGCAAGCTCCCGCCCCTGGCGGCATGCACAAACGGCCAGGACAGATGATCGAACCCAACGTC TACCTTATCAGGCCGCCCTCGATCAAACGTCTGCCCTCCCCTCTCCCACCCCCAGCGGCTATGCCTTACCCACAACTGGT GTCAACCACGTGCGTATCAGCAGGTATGATCGCCATGGATGCTGTTGTGGGCGACTGGCCCGATGGCAGTGTGCCGCTCC AGCCGTGCTATCACGTGCTGGATGGATTGCCGTACCCGCTCGTCAGGCGCGTGTCGCGCAGTTTGGCGTGCGGCAGCCAT GCTGCCGCGCCAGCCGCGCTCACGATCCGGCGCGGATTGCAGCGGACACCCGTGCCGGTACGTTCCCCTGA
Upstream 100 bases:
>100_bases ATCGAAGAAGATCCATCCAACCCAAAATATATTCTGACCGAACGCGGCGTTGGCTATCGCTTTGTCGATTTTCCCGGGGC GCGCCGCATCAATGCTACCG
Downstream 100 bases:
>100_bases TGATGGGGATGGCTGAGCACAGGCCGGCAGCCTGCCCCTCCGCGTGCTGGTGCCGGTAGTGTGGAGGGGCGGGTTCGGTA GGGGCGGGTTGAGAACCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MYRCDVVPVLSIHDRLQRVSFSPSIFCYESKIDFRPPPYLSPAGGIVERRPRWAEAFPRTQRGYALPITRILHCPRAGAG RGSDEERAPQPGAGSARRRRAWCRYQCWREEPGASSRPWRHAQTARTDDRTQRLPYQAALDQTSALPSPTPSGYALPTTG VNHVRISRYDRHGCCCGRLARWQCAAPAVLSRAGWIAVPARQARVAQFGVRQPCCRASRAHDPARIAADTRAGTFP
Sequences:
>Translated_236_residues MYRCDVVPVLSIHDRLQRVSFSPSIFCYESKIDFRPPPYLSPAGGIVERRPRWAEAFPRTQRGYALPITRILHCPRAGAG RGSDEERAPQPGAGSARRRRAWCRYQCWREEPGASSRPWRHAQTARTDDRTQRLPYQAALDQTSALPSPTPSGYALPTTG VNHVRISRYDRHGCCCGRLARWQCAAPAVLSRAGWIAVPARQARVAQFGVRQPCCRASRAHDPARIAADTRAGTFP >Mature_236_residues MYRCDVVPVLSIHDRLQRVSFSPSIFCYESKIDFRPPPYLSPAGGIVERRPRWAEAFPRTQRGYALPITRILHCPRAGAG RGSDEERAPQPGAGSARRRRAWCRYQCWREEPGASSRPWRHAQTARTDDRTQRLPYQAALDQTSALPSPTPSGYALPTTG VNHVRISRYDRHGCCCGRLARWQCAAPAVLSRAGWIAVPARQARVAQFGVRQPCCRASRAHDPARIAADTRAGTFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26403; Mature: 26403
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRCDVVPVLSIHDRLQRVSFSPSIFCYESKIDFRPPPYLSPAGGIVERRPRWAEAFPRT CCCCCEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHCCCCHHHHCCCC QRGYALPITRILHCPRAGAGRGSDEERAPQPGAGSARRRRAWCRYQCWREEPGASSRPWR CCCEECHHHHHHHCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC HAQTARTDDRTQRLPYQAALDQTSALPSPTPSGYALPTTGVNHVRISRYDRHGCCCGRLA CHHHCCCCHHHHHCCHHHHHHHHHCCCCCCCCCEECCCCCCCEEEEECCCCCCCHHHHHH RWQCAAPAVLSRAGWIAVPARQARVAQFGVRQPCCRASRAHDPARIAADTRAGTFP HHHHCCHHHHHCCCEEEECHHHHHHHHHCCCCHHHHHHCCCCCHHEEECCCCCCCC >Mature Secondary Structure MYRCDVVPVLSIHDRLQRVSFSPSIFCYESKIDFRPPPYLSPAGGIVERRPRWAEAFPRT CCCCCEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHCCCCHHHHCCCC QRGYALPITRILHCPRAGAGRGSDEERAPQPGAGSARRRRAWCRYQCWREEPGASSRPWR CCCEECHHHHHHHCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC HAQTARTDDRTQRLPYQAALDQTSALPSPTPSGYALPTTGVNHVRISRYDRHGCCCGRLA CHHHCCCCHHHHHCCHHHHHHHHHCCCCCCCCCEECCCCCCCEEEEECCCCCCCHHHHHH RWQCAAPAVLSRAGWIAVPARQARVAQFGVRQPCCRASRAHDPARIAADTRAGTFP HHHHCCHHHHHCCCEEEECHHHHHHHHHCCCCHHHHHHCCCCCHHEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA