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The map label for this gene is kdpE [H]

Identifier: 222525411

GI number: 222525411

Start: 2734120

End: 2734860

Strand: Direct

Name: kdpE [H]

Synonym: Chy400_2156

Alternate gene names: 222525411

Gene position: 2734120-2734860 (Clockwise)

Preceding gene: 222525410

Following gene: 222525412

Centisome position: 51.89

GC content: 54.25

Gene sequence:

>741_bases
ATGAGCGAATTAAAAGACAAATTAGTTCTCGTCGTTGATGACGAGCCGCGCATGATCACATTCATGCGCATGAATCTTGA
ACTGGAAGGCATGCGGGTGACAACCGCCACCAATGGCCGCGAAGCGGTCGAAAAGGTGCGCGAAGAGATGCCCGACATCG
TCTTGCTCGACATCATGATGCCGGTGATGGACGGTTTTGAGGCGCTCCGGCGTATCCGCAGCTTCTCCCAGGTACCGGTG
ATCATTCTTACCGCCAAAGATGAAGAAGAAGATCGGGTGCGTGGTCTGGAACTTGGGGCGGATGATTATGTTGGCAAGCC
CTTCAGCCAGCGCGAACTGGTAAGCCGTATTCGGGCAGTCCTGCGCCGCCATTACACCCAACCTCCCATCCCTCAAACCC
TGGTGAAGGTTGATGATCGGTTAAGTATCGACTTTGCCCGCCGCGAAGTGTTGGTCGATGGCAAGCGCGTCAATTTGCGA
CCAACCGAATACCGCCTGCTTTACCATCTGGTTCAGAATGCCGGTTACGTGCTAACCCACGAGATGCTGCTGAGCAAGGT
GTGGGGGCCAGAATACCGCGACGAAAGTCACTATCTGCGTTTGTACATCACCTATCTGCGCCAGAAGATCGAAGAAGATC
CATCCAACCCAAAATATATTCTGACCGAACGCGGCGTTGGCTATCGCTTTGTCGATTTTCCCGGGGCGCGCCGCATCAAT
GCTACCGATGTACCGGTGTGA

Upstream 100 bases:

>100_bases
GACCCCCGTCCGGCGTTAATCGCCGGCGGTCTGTTAGGAATTTTGCTGCTGAGCCGCCTTATTGGCAGACAAAGCTGGCA
GCGTATGGTACAATGGAGCC

Downstream 100 bases:

>100_bases
CGTAGTCCCTGTCTTATCCATCCACGACCGGCTACAGCGCGTTAGTTTCTCTCCCTCAATATTCTGCTACGAGAGCAAGA
TTGACTTCCGCCCCCCTCCT

Product: winged helix family two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSELKDKLVLVVDDEPRMITFMRMNLELEGMRVTTATNGREAVEKVREEMPDIVLLDIMMPVMDGFEALRRIRSFSQVPV
IILTAKDEEEDRVRGLELGADDYVGKPFSQRELVSRIRAVLRRHYTQPPIPQTLVKVDDRLSIDFARREVLVDGKRVNLR
PTEYRLLYHLVQNAGYVLTHEMLLSKVWGPEYRDESHYLRLYITYLRQKIEEDPSNPKYILTERGVGYRFVDFPGARRIN
ATDVPV

Sequences:

>Translated_246_residues
MSELKDKLVLVVDDEPRMITFMRMNLELEGMRVTTATNGREAVEKVREEMPDIVLLDIMMPVMDGFEALRRIRSFSQVPV
IILTAKDEEEDRVRGLELGADDYVGKPFSQRELVSRIRAVLRRHYTQPPIPQTLVKVDDRLSIDFARREVLVDGKRVNLR
PTEYRLLYHLVQNAGYVLTHEMLLSKVWGPEYRDESHYLRLYITYLRQKIEEDPSNPKYILTERGVGYRFVDFPGARRIN
ATDVPV
>Mature_245_residues
SELKDKLVLVVDDEPRMITFMRMNLELEGMRVTTATNGREAVEKVREEMPDIVLLDIMMPVMDGFEALRRIRSFSQVPVI
ILTAKDEEEDRVRGLELGADDYVGKPFSQRELVSRIRAVLRRHYTQPPIPQTLVKVDDRLSIDFARREVLVDGKRVNLRP
TEYRLLYHLVQNAGYVLTHEMLLSKVWGPEYRDESHYLRLYITYLRQKIEEDPSNPKYILTERGVGYRFVDFPGARRINA
TDVPV

Specific function: Member of the two-component regulatory system kdpD/kdpE involved in the regulation of the kdp operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786911, Length=223, Percent_Identity=44.8430493273543, Blast_Score=198, Evalue=3e-52,
Organism=Escherichia coli, GI1788394, Length=222, Percent_Identity=36.4864864864865, Blast_Score=140, Evalue=7e-35,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=36.5638766519824, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI87082012, Length=223, Percent_Identity=34.0807174887892, Blast_Score=138, Evalue=3e-34,
Organism=Escherichia coli, GI1786599, Length=225, Percent_Identity=36.8888888888889, Blast_Score=137, Evalue=5e-34,
Organism=Escherichia coli, GI2367329, Length=230, Percent_Identity=37.3913043478261, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=35.7466063348416, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1790552, Length=224, Percent_Identity=33.9285714285714, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=31.5789473684211, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI1787375, Length=231, Percent_Identity=30.7359307359307, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1790860, Length=221, Percent_Identity=31.6742081447964, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1789402, Length=221, Percent_Identity=33.0316742081448, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1787229, Length=229, Percent_Identity=30.5676855895196, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=27.2727272727273, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1788550, Length=106, Percent_Identity=43.3962264150943, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1790437, Length=207, Percent_Identity=28.5024154589372, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1790299, Length=133, Percent_Identity=34.5864661654135, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI145693157, Length=110, Percent_Identity=36.3636363636364, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1788222, Length=131, Percent_Identity=35.1145038167939, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788713, Length=126, Percent_Identity=34.1269841269841, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 28767; Mature: 28636

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELKDKLVLVVDDEPRMITFMRMNLELEGMRVTTATNGREAVEKVREEMPDIVLLDIMM
CCCCCCCEEEEECCCCCEEEEEEECEEECCEEEEECCCCHHHHHHHHHHCCCEEHHHHHH
PVMDGFEALRRIRSFSQVPVIILTAKDEEEDRVRGLELGADDYVGKPFSQRELVSRIRAV
HHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHCEECCCCCCCCCCCHHHHHHHHHHHH
LRRHYTQPPIPQTLVKVDDRLSIDFARREVLVDGKRVNLRPTEYRLLYHLVQNAGYVLTH
HHHHCCCCCCCHHHHHHCCCCCHHHHHHHHEECCCEECCCCHHHHHHHHHHHHCCCEEHH
EMLLSKVWGPEYRDESHYLRLYITYLRQKIEEDPSNPKYILTERGVGYRFVDFPGARRIN
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCCC
ATDVPV
CCCCCC
>Mature Secondary Structure 
SELKDKLVLVVDDEPRMITFMRMNLELEGMRVTTATNGREAVEKVREEMPDIVLLDIMM
CCCCCCEEEEECCCCCEEEEEEECEEECCEEEEECCCCHHHHHHHHHHCCCEEHHHHHH
PVMDGFEALRRIRSFSQVPVIILTAKDEEEDRVRGLELGADDYVGKPFSQRELVSRIRAV
HHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHCEECCCCCCCCCCCHHHHHHHHHHHH
LRRHYTQPPIPQTLVKVDDRLSIDFARREVLVDGKRVNLRPTEYRLLYHLVQNAGYVLTH
HHHHCCCCCCCHHHHHHCCCCCHHHHHHHHEECCCEECCCCHHHHHHHHHHHHCCCEEHH
EMLLSKVWGPEYRDESHYLRLYITYLRQKIEEDPSNPKYILTERGVGYRFVDFPGARRIN
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCCC
ATDVPV
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1532388; 8905232; 9278503 [H]