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The map label for this gene is yedY [H]

Identifier: 222525409

GI number: 222525409

Start: 2731745

End: 2732692

Strand: Direct

Name: yedY [H]

Synonym: Chy400_2154

Alternate gene names: 222525409

Gene position: 2731745-2732692 (Clockwise)

Preceding gene: 222525408

Following gene: 222525410

Centisome position: 51.85

GC content: 57.91

Gene sequence:

>948_bases
ATGTATCGCGATCCCTCAATTCGCTCTTCCGAGATAACTCCAGAGTCGCTCTACCTGAGCCGACGGGCCTTGTTAGGTGG
CATCGGCGCACTGGGTGCCGGCCTCGTGCTGAGCGCCTGTGGTCTGAATGTTCCCTCAGATCGTCCGGGGCAGGCAGTAG
CACCCGACGATACCACCCCCCGCGACGAGCTTGGCGATCCGGCCAACAGCTTCGAGCAGATCACCAACTACAACAACTTC
TACGAATTCACGACCGACAAAGAAGCGGTTGCGCACCGGGCCGCCGGTTTCGTGACCCACCCCTGGACAGTAGAAGTGAC
AGGGATGGTACACAAGCCACGGATCTTTGCTATCGAAGATATCCTCTCGATGTTCGACCAGGAAGAGCGCATTTATCGTC
TACGCTGCGTCGAAGGGTGGTCAATGGTCATCCCCTGGCAGGGTTTCCCGCTCCACAAACTGCTGACCATCGTCGAACCA
ACTGCACAGGCCCAGTTCGTTCGCTTCGAGACCCTCTACGACCCTGATCAGATGCCAGGGCAGCGTGACCGCTACTTCCC
ATGGCCCTACGTTGAAGGACTACGCCTCGATGAGGCAATGCACGACTTAACGATCCTGAGCACCGGCCTCTACGGTCGTA
CCCTCTTGCCGCAAAATGGCGCCCCACTGCGCCTGGTAGTTCCATGGAAATACGGCTTCAAAAGCATCAAATCCATCGTC
AAAATTGAACTAACCGATACCATGCCGGTATCGTTGTGGATGGCAGTCGCACCGCATGAATACGGCTTCTACGCCAACGT
CAATCCCGACGTTCCCCATCCACGCTGGTCGCAGGCCACCGAACGGCGCATCGGCGAGCTTGGCCGGCGCAAAACGTTGC
TCTTCAACGGCTATGCCGAACAGGTCGCTGCCCTGTACGCCGGGATGGATCTGGCCCGTAATTACTAG

Upstream 100 bases:

>100_bases
ACAAGGCGAGGATGTCATCCGTTGAATTCAGTTGTCGGCTAACCGTGGTGGTTTTGCTGACGGCAACTCTCTCGATAACC
ACATTCGGCAAAGGACTGCT

Downstream 100 bases:

>100_bases
AACTTATTTCATAAAAGCTGTGCTGTCGTGCTCCCAGCCTATCGCACATGCGCATGAACACCTGCTAATCGCCAACAACA
GCATATCCTGCTTCCAGTCT

Product: putative sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MYRDPSIRSSEITPESLYLSRRALLGGIGALGAGLVLSACGLNVPSDRPGQAVAPDDTTPRDELGDPANSFEQITNYNNF
YEFTTDKEAVAHRAAGFVTHPWTVEVTGMVHKPRIFAIEDILSMFDQEERIYRLRCVEGWSMVIPWQGFPLHKLLTIVEP
TAQAQFVRFETLYDPDQMPGQRDRYFPWPYVEGLRLDEAMHDLTILSTGLYGRTLLPQNGAPLRLVVPWKYGFKSIKSIV
KIELTDTMPVSLWMAVAPHEYGFYANVNPDVPHPRWSQATERRIGELGRRKTLLFNGYAEQVAALYAGMDLARNY

Sequences:

>Translated_315_residues
MYRDPSIRSSEITPESLYLSRRALLGGIGALGAGLVLSACGLNVPSDRPGQAVAPDDTTPRDELGDPANSFEQITNYNNF
YEFTTDKEAVAHRAAGFVTHPWTVEVTGMVHKPRIFAIEDILSMFDQEERIYRLRCVEGWSMVIPWQGFPLHKLLTIVEP
TAQAQFVRFETLYDPDQMPGQRDRYFPWPYVEGLRLDEAMHDLTILSTGLYGRTLLPQNGAPLRLVVPWKYGFKSIKSIV
KIELTDTMPVSLWMAVAPHEYGFYANVNPDVPHPRWSQATERRIGELGRRKTLLFNGYAEQVAALYAGMDLARNY
>Mature_315_residues
MYRDPSIRSSEITPESLYLSRRALLGGIGALGAGLVLSACGLNVPSDRPGQAVAPDDTTPRDELGDPANSFEQITNYNNF
YEFTTDKEAVAHRAAGFVTHPWTVEVTGMVHKPRIFAIEDILSMFDQEERIYRLRCVEGWSMVIPWQGFPLHKLLTIVEP
TAQAQFVRFETLYDPDQMPGQRDRYFPWPYVEGLRLDEAMHDLTILSTGLYGRTLLPQNGAPLRLVVPWKYGFKSIKSIV
KIELTDTMPVSLWMAVAPHEYGFYANVNPDVPHPRWSQATERRIGELGRRKTLLFNGYAEQVAALYAGMDLARNY

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=334, Percent_Identity=50.5988023952096, Blast_Score=323, Evalue=6e-90,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 35671; Mature: 35671

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRDPSIRSSEITPESLYLSRRALLGGIGALGAGLVLSACGLNVPSDRPGQAVAPDDTTP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
RDELGDPANSFEQITNYNNFYEFTTDKEAVAHRAAGFVTHPWTVEVTGMVHKPRIFAIED
HHHCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHCCCEECCEEEEEECEEECCEEEEHHH
ILSMFDQEERIYRLRCVEGWSMVIPWQGFPLHKLLTIVEPTAQAQFVRFETLYDPDQMPG
HHHHHCCHHHEEEEEEECCCEEEECCCCCCHHHHHHHHCCCCHHEEEEEEECCCCCCCCC
QRDRYFPWPYVEGLRLDEAMHDLTILSTGLYGRTLLPQNGAPLRLVVPWKYGFKSIKSIV
CCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCEECCCCCCCEEEEECCHHHHHHHHHEE
KIELTDTMPVSLWMAVAPHEYGFYANVNPDVPHPRWSQATERRIGELGRRKTLLFNGYAE
EEEECCCCCEEEEEEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHH
QVAALYAGMDLARNY
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MYRDPSIRSSEITPESLYLSRRALLGGIGALGAGLVLSACGLNVPSDRPGQAVAPDDTTP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
RDELGDPANSFEQITNYNNFYEFTTDKEAVAHRAAGFVTHPWTVEVTGMVHKPRIFAIED
HHHCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHCCCEECCEEEEEECEEECCEEEEHHH
ILSMFDQEERIYRLRCVEGWSMVIPWQGFPLHKLLTIVEPTAQAQFVRFETLYDPDQMPG
HHHHHCCHHHEEEEEEECCCEEEECCCCCCHHHHHHHHCCCCHHEEEEEEECCCCCCCCC
QRDRYFPWPYVEGLRLDEAMHDLTILSTGLYGRTLLPQNGAPLRLVVPWKYGFKSIKSIV
CCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCEECCCCCCCEEEEECCHHHHHHHHHEE
KIELTDTMPVSLWMAVAPHEYGFYANVNPDVPHPRWSQATERRIGELGRRKTLLFNGYAE
EEEECCCCCEEEEEEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCHHH
QVAALYAGMDLARNY
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14500782 [H]