Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222525408
Identifier: 222525408
GI number: 222525408
Start: 2730997
End: 2731581
Strand: Direct
Name: 222525408
Synonym: Chy400_2153
Alternate gene names: NA
Gene position: 2730997-2731581 (Clockwise)
Preceding gene: 222525407
Following gene: 222525409
Centisome position: 51.83
GC content: 62.05
Gene sequence:
>585_bases ATGTCATCTTCTGAGCCGACATCATCGCCACTGCCATCACCCTCGTCCCGCTGGCGACACTACGTCCGCCTGCTGGTACC GCATCTGCTGACCATCCTGATCAGCCTTGGCCTCTTCACCCTGCTGCAAACCTGGCTCCAGCCTGCACCAATCCCGGCTG AACCGCAGATTGCCACGGTCACGCCACTGCCGACCATCCCCCCCACACCAATCCCTACCCCCCAACCGACCTTGCCACCG GTGCCGGTAGACGAGGGACTGATCCGGCTCTCCATCCTCGATCTTCAGGCCGAAAACGCCCGCTTACGAACTGCCACCCA CCTGCTGCGCGCTGCCATCACCCTCGACGAAGCGGTCAACGCCCTGCAGCGCAACGACATGGCCGAAGCTGATCGAGCGT TGATGACCGCCCGACGGGCACTGGATCGGGCCTACAACCTCAGCACCGAGCAGCAAAAAGGCCCTATCGATGTCATTCGC CTCCAGATCAGCCAGATTCGCGATGATCTCGGCGTGCGGCCAGAGGGCGCCGACCGACGGTTGTGGCAGGTACGTCGGCT GATTTTGACACTGGTGGATGAATAA
Upstream 100 bases:
>100_bases AGATAACCCCTCCACGTTTGGGCTGCAATGTCATCTTCTGAGCCGACATCATCGCCACTTGTCCAACTACGAGCGAATGC GAACAACCAGAGCCGCTGCA
Downstream 100 bases:
>100_bases CATACGTCCCGCGTCCATCCATGTTCCGCTCCAGGCCGTATAATACCAGTAGTACGTCTCTGCACAAGGCGAGGATGTCA TCCGTTGAATTCAGTTGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MSSSEPTSSPLPSPSSRWRHYVRLLVPHLLTILISLGLFTLLQTWLQPAPIPAEPQIATVTPLPTIPPTPIPTPQPTLPP VPVDEGLIRLSILDLQAENARLRTATHLLRAAITLDEAVNALQRNDMAEADRALMTARRALDRAYNLSTEQQKGPIDVIR LQISQIRDDLGVRPEGADRRLWQVRRLILTLVDE
Sequences:
>Translated_194_residues MSSSEPTSSPLPSPSSRWRHYVRLLVPHLLTILISLGLFTLLQTWLQPAPIPAEPQIATVTPLPTIPPTPIPTPQPTLPP VPVDEGLIRLSILDLQAENARLRTATHLLRAAITLDEAVNALQRNDMAEADRALMTARRALDRAYNLSTEQQKGPIDVIR LQISQIRDDLGVRPEGADRRLWQVRRLILTLVDE >Mature_193_residues SSSEPTSSPLPSPSSRWRHYVRLLVPHLLTILISLGLFTLLQTWLQPAPIPAEPQIATVTPLPTIPPTPIPTPQPTLPPV PVDEGLIRLSILDLQAENARLRTATHLLRAAITLDEAVNALQRNDMAEADRALMTARRALDRAYNLSTEQQKGPIDVIRL QISQIRDDLGVRPEGADRRLWQVRRLILTLVDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21621; Mature: 21490
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSEPTSSPLPSPSSRWRHYVRLLVPHLLTILISLGLFTLLQTWLQPAPIPAEPQIATV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE TPLPTIPPTPIPTPQPTLPPVPVDEGLIRLSILDLQAENARLRTATHLLRAAITLDEAVN CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHEECCCCCCCHHHHHHHHHHHHHHHHHHHH ALQRNDMAEADRALMTARRALDRAYNLSTEQQKGPIDVIRLQISQIRDDLGVRPEGADRR HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHH LWQVRRLILTLVDE HHHHHHHHHHHHCC >Mature Secondary Structure SSSEPTSSPLPSPSSRWRHYVRLLVPHLLTILISLGLFTLLQTWLQPAPIPAEPQIATV CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE TPLPTIPPTPIPTPQPTLPPVPVDEGLIRLSILDLQAENARLRTATHLLRAAITLDEAVN CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHEECCCCCCCHHHHHHHHHHHHHHHHHHHH ALQRNDMAEADRALMTARRALDRAYNLSTEQQKGPIDVIRLQISQIRDDLGVRPEGADRR HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHH LWQVRRLILTLVDE HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA