| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is resE [H]
Identifier: 222524780
GI number: 222524780
Start: 1907490
End: 1909745
Strand: Direct
Name: resE [H]
Synonym: Chy400_1507
Alternate gene names: 222524780
Gene position: 1907490-1909745 (Clockwise)
Preceding gene: 222524775
Following gene: 222524781
Centisome position: 36.2
GC content: 51.95
Gene sequence:
>2256_bases ATGAGTCGGCTGATTGGCGAGCTGCAAAAACAGCTCAAATACCAGATTATCGGCCCCTTCCTCCTCCTTGCGATTGTGGT AGCAATCGTAGGATTGACGATTGTCGCTTTTTTTCTCGCCCGTCAACAACAGGATCGCTTTGACAACGAGCTGGCCGCAG CAACTCGCACGGTTAGCGATGCCTTTCTTGCTCAGGAACAGGCGAATCTCAACTTTTTACGCGAAGTAGCTTTCGCCCAG CGCAACGAGAGCATCAATGCACCGGCAGTGGCCGACGCATTCTATGAAAACAACGTTGAAGGTTTGCGGCTCGCCCTCGA ACCTTTCTTCCTGCAAGGTACCCGTCGCAGTGATGTCCGCCTTGACCGGTTGATGGCATTTGACCGCAGCGGTCGCACGA TTGTCGATTTTGAGCGGCCACCGCTCGCCGGTGAAGAGACATATATTACTCATGACTCAATTGATCTCAGCAGTGCCTGG TTTACGTCACGCATCCTCAATGGTGAGGCCGATGAGCGTGGTGATAAATACGCCGGCCTGATCCAGTTTAGCAATACGCA GACGCTCTACCTGGCAACTATCGCACCGGTACGACGGGGTAATGAGGTGGTTGGCGGCCTGATCGTAGCAATTCGTATCG ATAACCTGCTCAACACCGTTGTACAACAATCCCGATTAGATGGAATCATTCTCTACGATCAGGAAGGAAATCTGATAGCC ACTACCTTTAGCAGTCAGGCGCGACCTGCACCGCTGCGGCAAGAGCTGGTTTCACAGGTTAAAGCCAATCCTGATCCATA TGGACAAACCCTCTTCACCATCGAAACGATCAATGGTGTCGAGTATCAATTTGCTTATGTACCGTTAACCATCCGTGGGG GACGTGCTGGTATCATGGCAACAGCCCGTACCCGCGAAGAGGTGCTGTTAACGTGGAACAATATCAGCCCATTGCTGGTA CTGATCACCTTCAGCTTAGGCCTGGGCATTGCCGTACTCGGTTTGTGGGTAGCCCGTCGCATTACCCGCCCCCTCGAAGA ACTGGCGGAAACAGCCAGTGCCATCGTGAACGGCGATCTGCAACGACGTGCGTCAGTGAATACGCAGAACGAGATTGGTG TGTTGGCTCGACAATTCAATCGAATGACCGAGTACCTGATTGAATTACTTGCCCAGGTACGTGCCGAAGCTCGCCAGCGC ACTGCAATCGTCGAAAGTATCACCGACGGTATTATCTTTATTGATGTCCATGGCGAGATTCGTTCTATTAATCGCGCTAC ACGCCGCCTGCTTGGTTTGAGTGATGATACAGCCCTACCCAAACGCCTCAGTGATCTACCGCTCGAACCACTGACTGAAG GTATTCCGGGCTTTGGCGATCAACGTGCCCAAAATCTCTATACCCTTGGCGATTATATTGTTCGGCTGTCAGTCGAAGAT GTACGTGAAGATGATGGGCATCTGTTAGGGTATGTCGCCGTCTTGCAAGACCTCACCGAAGAGGTGATGGTCGACCGGGC AAAAACAAACTTTATCGGTACAATTTCCCACGAGCTTCGCACTCCACTCACGGTCATTCGTGGGAACGCCGATCTGCTGG CGCGTGGTCTGGCCGGACCACTCGAAGATGAACAGAAGAGCTTCGTTGAAGCAATTCGGTTGCAGGCAAACAACATGACA AACCTGATTAGCAATGTCATCACCATTGCTAATCTCGACTCTGGTTCACTGAAATCCACTCTCGAACCGATTGAGGTGCA GCGGCCAATCGAAGATGCAATCTGGCAGACGCAAGGACAGATCAAAGCAAAGGGATTGCGGCTTGAAGTTGAAATACCAA AGAAGTTGCCAAAGGTCCTGGCCGATTTCGATCATGTCCGCACCATCATGCTTCAGTTGCTTGACAATGCCCGGCGTTAT ACGAGTGCCGGTACTATCACCGTTCGTGTTATGCCTCAACCTGATACATTGCGGATTGAGGTTAGTGATACAGGGCGTGG CATCCCACCCAACTTGCATCAACAAATCTTCGAGCGCTTCTTTCGCGGTGATGGGACAAGTGAGGGGATTAATTCCAGCG AACGTGGCATTGGATTGGGCTTAGCTATTTGCAAGCAACTGATCGAGCGTCTAGGGGGGACGATCGGCGTCGAGAGTGCG CCAGGTCAGGGAAGTACGTTCTTCTTCACATTACGGTACGCCGATGATACCGCCACTCCTGAAAAACCAGCAACCGGCCT GGAATCGGCTGCTTGA
Upstream 100 bases:
>100_bases ATGCACGTGGAAGTACAGTACGTCACTCAGACAGACAGGCTTATGACACGCATCCTTTTCGCTGTCGGACGACAAACCAA CGTACTACAGGAAGACAGTC
Downstream 100 bases:
>100_bases CCGTGATCGTCTCCGACGACCATTGCCCTGGCTGATTCTCGGCTCTCTGTTGCTATTACTGCTGCTGATCTCGCTTGTGA TCAACCTGATGATCGATCAG
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 751; Mature: 750
Protein sequence:
>751_residues MSRLIGELQKQLKYQIIGPFLLLAIVVAIVGLTIVAFFLARQQQDRFDNELAAATRTVSDAFLAQEQANLNFLREVAFAQ RNESINAPAVADAFYENNVEGLRLALEPFFLQGTRRSDVRLDRLMAFDRSGRTIVDFERPPLAGEETYITHDSIDLSSAW FTSRILNGEADERGDKYAGLIQFSNTQTLYLATIAPVRRGNEVVGGLIVAIRIDNLLNTVVQQSRLDGIILYDQEGNLIA TTFSSQARPAPLRQELVSQVKANPDPYGQTLFTIETINGVEYQFAYVPLTIRGGRAGIMATARTREEVLLTWNNISPLLV LITFSLGLGIAVLGLWVARRITRPLEELAETASAIVNGDLQRRASVNTQNEIGVLARQFNRMTEYLIELLAQVRAEARQR TAIVESITDGIIFIDVHGEIRSINRATRRLLGLSDDTALPKRLSDLPLEPLTEGIPGFGDQRAQNLYTLGDYIVRLSVED VREDDGHLLGYVAVLQDLTEEVMVDRAKTNFIGTISHELRTPLTVIRGNADLLARGLAGPLEDEQKSFVEAIRLQANNMT NLISNVITIANLDSGSLKSTLEPIEVQRPIEDAIWQTQGQIKAKGLRLEVEIPKKLPKVLADFDHVRTIMLQLLDNARRY TSAGTITVRVMPQPDTLRIEVSDTGRGIPPNLHQQIFERFFRGDGTSEGINSSERGIGLGLAICKQLIERLGGTIGVESA PGQGSTFFFTLRYADDTATPEKPATGLESAA
Sequences:
>Translated_751_residues MSRLIGELQKQLKYQIIGPFLLLAIVVAIVGLTIVAFFLARQQQDRFDNELAAATRTVSDAFLAQEQANLNFLREVAFAQ RNESINAPAVADAFYENNVEGLRLALEPFFLQGTRRSDVRLDRLMAFDRSGRTIVDFERPPLAGEETYITHDSIDLSSAW FTSRILNGEADERGDKYAGLIQFSNTQTLYLATIAPVRRGNEVVGGLIVAIRIDNLLNTVVQQSRLDGIILYDQEGNLIA TTFSSQARPAPLRQELVSQVKANPDPYGQTLFTIETINGVEYQFAYVPLTIRGGRAGIMATARTREEVLLTWNNISPLLV LITFSLGLGIAVLGLWVARRITRPLEELAETASAIVNGDLQRRASVNTQNEIGVLARQFNRMTEYLIELLAQVRAEARQR TAIVESITDGIIFIDVHGEIRSINRATRRLLGLSDDTALPKRLSDLPLEPLTEGIPGFGDQRAQNLYTLGDYIVRLSVED VREDDGHLLGYVAVLQDLTEEVMVDRAKTNFIGTISHELRTPLTVIRGNADLLARGLAGPLEDEQKSFVEAIRLQANNMT NLISNVITIANLDSGSLKSTLEPIEVQRPIEDAIWQTQGQIKAKGLRLEVEIPKKLPKVLADFDHVRTIMLQLLDNARRY TSAGTITVRVMPQPDTLRIEVSDTGRGIPPNLHQQIFERFFRGDGTSEGINSSERGIGLGLAICKQLIERLGGTIGVESA PGQGSTFFFTLRYADDTATPEKPATGLESAA >Mature_750_residues SRLIGELQKQLKYQIIGPFLLLAIVVAIVGLTIVAFFLARQQQDRFDNELAAATRTVSDAFLAQEQANLNFLREVAFAQR NESINAPAVADAFYENNVEGLRLALEPFFLQGTRRSDVRLDRLMAFDRSGRTIVDFERPPLAGEETYITHDSIDLSSAWF TSRILNGEADERGDKYAGLIQFSNTQTLYLATIAPVRRGNEVVGGLIVAIRIDNLLNTVVQQSRLDGIILYDQEGNLIAT TFSSQARPAPLRQELVSQVKANPDPYGQTLFTIETINGVEYQFAYVPLTIRGGRAGIMATARTREEVLLTWNNISPLLVL ITFSLGLGIAVLGLWVARRITRPLEELAETASAIVNGDLQRRASVNTQNEIGVLARQFNRMTEYLIELLAQVRAEARQRT AIVESITDGIIFIDVHGEIRSINRATRRLLGLSDDTALPKRLSDLPLEPLTEGIPGFGDQRAQNLYTLGDYIVRLSVEDV REDDGHLLGYVAVLQDLTEEVMVDRAKTNFIGTISHELRTPLTVIRGNADLLARGLAGPLEDEQKSFVEAIRLQANNMTN LISNVITIANLDSGSLKSTLEPIEVQRPIEDAIWQTQGQIKAKGLRLEVEIPKKLPKVLADFDHVRTIMLQLLDNARRYT SAGTITVRVMPQPDTLRIEVSDTGRGIPPNLHQQIFERFFRGDGTSEGINSSERGIGLGLAICKQLIERLGGTIGVESAP GQGSTFFFTLRYADDTATPEKPATGLESAA
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: COG5002
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=229, Percent_Identity=34.061135371179, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI145693157, Length=225, Percent_Identity=34.6666666666667, Blast_Score=105, Evalue=7e-24, Organism=Escherichia coli, GI1786912, Length=230, Percent_Identity=30.4347826086957, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1789149, Length=232, Percent_Identity=29.7413793103448, Blast_Score=103, Evalue=4e-23, Organism=Escherichia coli, GI87081816, Length=243, Percent_Identity=30.0411522633745, Blast_Score=103, Evalue=4e-23, Organism=Escherichia coli, GI1788393, Length=218, Percent_Identity=28.8990825688073, Blast_Score=100, Evalue=6e-22, Organism=Escherichia coli, GI1786600, Length=243, Percent_Identity=30.0411522633745, Blast_Score=96, Evalue=1e-20, Organism=Escherichia coli, GI1788713, Length=266, Percent_Identity=28.1954887218045, Blast_Score=94, Evalue=4e-20, Organism=Escherichia coli, GI87082128, Length=235, Percent_Identity=28.5106382978723, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1788549, Length=362, Percent_Identity=25.1381215469613, Blast_Score=86, Evalue=7e-18, Organism=Escherichia coli, GI1790436, Length=218, Percent_Identity=25.6880733944954, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1790300, Length=349, Percent_Identity=26.647564469914, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI1790567, Length=356, Percent_Identity=28.3707865168539, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1790346, Length=216, Percent_Identity=26.8518518518519, Blast_Score=66, Evalue=1e-11, Organism=Escherichia coli, GI1786783, Length=227, Percent_Identity=27.3127753303965, Blast_Score=64, Evalue=4e-11, Organism=Escherichia coli, GI1787894, Length=224, Percent_Identity=25, Blast_Score=64, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=80, Percent_Identity=45, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 83043; Mature: 82912
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS50885 HAMP ; PS50112 PAS ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLIGELQKQLKYQIIGPFLLLAIVVAIVGLTIVAFFLARQQQDRFDNELAAATRTVSD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFLAQEQANLNFLREVAFAQRNESINAPAVADAFYENNVEGLRLALEPFFLQGTRRSDVR HHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEECHHHCCCCCCCHHH LDRLMAFDRSGRTIVDFERPPLAGEETYITHDSIDLSSAWFTSRILNGEADERGDKYAGL HHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEE IQFSNTQTLYLATIAPVRRGNEVVGGLIVAIRIDNLLNTVVQQSRLDGIILYDQEGNLIA EEECCCCEEEEEEECCHHCCCHHHHHEEEEEEHHHHHHHHHHHHCCCEEEEEECCCCEEE TTFSSQARPAPLRQELVSQVKANPDPYGQTLFTIETINGVEYQFAYVPLTIRGGRAGIMA EECCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEEEEEEEEEEEECCCCCEEE TARTREEVLLTWNNISPLLVLITFSLGLGIAVLGLWVARRITRPLEELAETASAIVNGDL ECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH QRRASVNTQNEIGVLARQFNRMTEYLIELLAQVRAEARQRTAIVESITDGIIFIDVHGEI HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHH RSINRATRRLLGLSDDTALPKRLSDLPLEPLTEGIPGFGDQRAQNLYTLGDYIVRLSVED HHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHEEEEHHH VREDDGHLLGYVAVLQDLTEEVMVDRAKTNFIGTISHELRTPLTVIRGNADLLARGLAGP HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHCCCEEEEECCHHHHHHHCCCC LEDEQKSFVEAIRLQANNMTNLISNVITIANLDSGSLKSTLEPIEVQRPIEDAIWQTQGQ CCHHHHHHHHHHHHHCCCHHHHHHHHHEEEECCCCCHHHHCCCHHHCCCHHHHHHHCCCC IKAKGLRLEVEIPKKLPKVLADFDHVRTIMLQLLDNARRYTSAGTITVRVMPQPDTLRIE EEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEE VSDTGRGIPPNLHQQIFERFFRGDGTSEGINSSERGIGLGLAICKQLIERLGGTIGVESA ECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCC PGQGSTFFFTLRYADDTATPEKPATGLESAA CCCCCEEEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRLIGELQKQLKYQIIGPFLLLAIVVAIVGLTIVAFFLARQQQDRFDNELAAATRTVSD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFLAQEQANLNFLREVAFAQRNESINAPAVADAFYENNVEGLRLALEPFFLQGTRRSDVR HHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEECHHHCCCCCCCHHH LDRLMAFDRSGRTIVDFERPPLAGEETYITHDSIDLSSAWFTSRILNGEADERGDKYAGL HHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEE IQFSNTQTLYLATIAPVRRGNEVVGGLIVAIRIDNLLNTVVQQSRLDGIILYDQEGNLIA EEECCCCEEEEEEECCHHCCCHHHHHEEEEEEHHHHHHHHHHHHCCCEEEEEECCCCEEE TTFSSQARPAPLRQELVSQVKANPDPYGQTLFTIETINGVEYQFAYVPLTIRGGRAGIMA EECCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEEEEEEEEEEEECCCCCEEE TARTREEVLLTWNNISPLLVLITFSLGLGIAVLGLWVARRITRPLEELAETASAIVNGDL ECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH QRRASVNTQNEIGVLARQFNRMTEYLIELLAQVRAEARQRTAIVESITDGIIFIDVHGEI HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHH RSINRATRRLLGLSDDTALPKRLSDLPLEPLTEGIPGFGDQRAQNLYTLGDYIVRLSVED HHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHHHEEEEHHH VREDDGHLLGYVAVLQDLTEEVMVDRAKTNFIGTISHELRTPLTVIRGNADLLARGLAGP HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHCCCEEEEECCHHHHHHHCCCC LEDEQKSFVEAIRLQANNMTNLISNVITIANLDSGSLKSTLEPIEVQRPIEDAIWQTQGQ CCHHHHHHHHHHHHHCCCHHHHHHHHHEEEECCCCCHHHHCCCHHHCCCHHHHHHHCCCC IKAKGLRLEVEIPKKLPKVLADFDHVRTIMLQLLDNARRYTSAGTITVRVMPQPDTLRIE EEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEE VSDTGRGIPPNLHQQIFERFFRGDGTSEGINSSERGIGLGLAICKQLIERLGGTIGVESA ECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCC PGQGSTFFFTLRYADDTATPEKPATGLESAA CCCCCEEEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]