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The map label for this gene is yliC [C]

Identifier: 222524762

GI number: 222524762

Start: 1883700

End: 1884659

Strand: Direct

Name: yliC [C]

Synonym: Chy400_1489

Alternate gene names: 222524762

Gene position: 1883700-1884659 (Clockwise)

Preceding gene: 222524761

Following gene: 222524763

Centisome position: 35.75

GC content: 59.17

Gene sequence:

>960_bases
ATGATACGTTATCTGTTACGACGAATAGTGTTGCTCGGCGGCACTGTGCTGATCAGCTCATTGATCATCTTTCTGATCTG
TCGCCTCTTACCCGGTGATGTAGCCCGAGTCCTCCTCGGTCGCGAAGCCGGTGAAGCGGCGCTGGCTGCACTGCGTGCCG
AACTGGGGTTGGATCGGCCATTGCCACTCCAATACATTGATTGGCTGAGAGGACTTCTCACCGGCGATTGGGGCATCGCA
TACAGCACACGCCAACCGATTCGACCGCTGGTCATGGAACGCCTGAGCAATTCACTCCTGCTGGCCGGCACAACATTAGC
CCTCGCACTGCCGTTGGGGATTGGGTTGGGGGTATGGGCCGGCTGGCGGGCCGGCAAACCCGACGACACAGTCATCAGCG
TCTCAACCCTGGCGGTCACCGGTCTACCAGAGTTTGTCACCGGCCTCCTGCTCATCGATCTCTTCGCCTTTCGCCTGCGC
TGGCTACCGGCCAACTCATCGATCCGGCCAGACACCTCATTCTTCGAGGTACTCCCCCAACTGGTATTGCCGGCAATCAC
GGCCACGCTGGTACTGCTGGCCTACATCGCCCGGCTAACGCGCACCGGGGTGATCGCCGAACGTGAGCAGGAATATGTCC
GCACCGCGATGCTAAAAGGACTGTCACCGGCAACGATTCTCCGCCGACACGTCTTACGCAATGCCTTATTGCCGGCCATT
ACGGTGATTGCCATCAGCCTCGGCTGGCTGATTAGCGGCCTGATCGTGGTCGAAAACGTCTACAACTATCCGGGTATTGG
GCGTCTGTTGACCTTTGCCATCGACCGCCGCGATCTCTTGCTGCTCCAGGCGGTAGCGATGATTACCGTCGTGATCTTTG
CTGTCGCCAATCTGCTGGCCGATCTCATGTATGCCCTCCTCGACCCCCGCATCCGGCTCGGTGACGAACGCAGCTCTTGA

Upstream 100 bases:

>100_bases
CCCCACCGCCGTGGCGCGAAGCCGGGAATGGGCACCGTCTACGCTGTCATATTCCGCTCGAAGAACTGCAAACCATTCAA
CAGCCTGAAGCAATCACGCC

Downstream 100 bases:

>100_bases
GGATGGCGATTCTCGACCACCAGCCAATGATTTTTGAGCAAAATTGCCAAAACCGCGCACCTTTTGCAGCCGATCTCCGG
TTCTATTAATAGGACATCAG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MIRYLLRRIVLLGGTVLISSLIIFLICRLLPGDVARVLLGREAGEAALAALRAELGLDRPLPLQYIDWLRGLLTGDWGIA
YSTRQPIRPLVMERLSNSLLLAGTTLALALPLGIGLGVWAGWRAGKPDDTVISVSTLAVTGLPEFVTGLLLIDLFAFRLR
WLPANSSIRPDTSFFEVLPQLVLPAITATLVLLAYIARLTRTGVIAEREQEYVRTAMLKGLSPATILRRHVLRNALLPAI
TVIAISLGWLISGLIVVENVYNYPGIGRLLTFAIDRRDLLLLQAVAMITVVIFAVANLLADLMYALLDPRIRLGDERSS

Sequences:

>Translated_319_residues
MIRYLLRRIVLLGGTVLISSLIIFLICRLLPGDVARVLLGREAGEAALAALRAELGLDRPLPLQYIDWLRGLLTGDWGIA
YSTRQPIRPLVMERLSNSLLLAGTTLALALPLGIGLGVWAGWRAGKPDDTVISVSTLAVTGLPEFVTGLLLIDLFAFRLR
WLPANSSIRPDTSFFEVLPQLVLPAITATLVLLAYIARLTRTGVIAEREQEYVRTAMLKGLSPATILRRHVLRNALLPAI
TVIAISLGWLISGLIVVENVYNYPGIGRLLTFAIDRRDLLLLQAVAMITVVIFAVANLLADLMYALLDPRIRLGDERSS
>Mature_319_residues
MIRYLLRRIVLLGGTVLISSLIIFLICRLLPGDVARVLLGREAGEAALAALRAELGLDRPLPLQYIDWLRGLLTGDWGIA
YSTRQPIRPLVMERLSNSLLLAGTTLALALPLGIGLGVWAGWRAGKPDDTVISVSTLAVTGLPEFVTGLLLIDLFAFRLR
WLPANSSIRPDTSFFEVLPQLVLPAITATLVLLAYIARLTRTGVIAEREQEYVRTAMLKGLSPATILRRHVLRNALLPAI
TVIAISLGWLISGLIVVENVYNYPGIGRLLTFAIDRRDLLLLQAVAMITVVIFAVANLLADLMYALLDPRIRLGDERSS

Specific function: Probably part of the binding-protein-dependent transport system y4tOPQRS for a peptide. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=315, Percent_Identity=35.5555555555556, Blast_Score=193, Evalue=1e-50,
Organism=Escherichia coli, GI1789888, Length=316, Percent_Identity=38.6075949367089, Blast_Score=186, Evalue=1e-48,
Organism=Escherichia coli, GI1789965, Length=338, Percent_Identity=31.6568047337278, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI1787497, Length=315, Percent_Identity=31.1111111111111, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1787761, Length=319, Percent_Identity=33.5423197492163, Blast_Score=124, Evalue=7e-30,
Organism=Escherichia coli, GI1787550, Length=268, Percent_Identity=28.7313432835821, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1788504, Length=288, Percent_Identity=28.125, Blast_Score=82, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34941; Mature: 34941

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRYLLRRIVLLGGTVLISSLIIFLICRLLPGDVARVLLGREAGEAALAALRAELGLDRP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
LPLQYIDWLRGLLTGDWGIAYSTRQPIRPLVMERLSNSLLLAGTTLALALPLGIGLGVWA
CCHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHC
GWRAGKPDDTVISVSTLAVTGLPEFVTGLLLIDLFAFRLRWLPANSSIRPDTSFFEVLPQ
CCCCCCCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
LVLPAITATLVLLAYIARLTRTGVIAEREQEYVRTAMLKGLSPATILRRHVLRNALLPAI
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
TVIAISLGWLISGLIVVENVYNYPGIGRLLTFAIDRRDLLLLQAVAMITVVIFAVANLLA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
DLMYALLDPRIRLGDERSS
HHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIRYLLRRIVLLGGTVLISSLIIFLICRLLPGDVARVLLGREAGEAALAALRAELGLDRP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
LPLQYIDWLRGLLTGDWGIAYSTRQPIRPLVMERLSNSLLLAGTTLALALPLGIGLGVWA
CCHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHC
GWRAGKPDDTVISVSTLAVTGLPEFVTGLLLIDLFAFRLRWLPANSSIRPDTSFFEVLPQ
CCCCCCCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
LVLPAITATLVLLAYIARLTRTGVIAEREQEYVRTAMLKGLSPATILRRHVLRNALLPAI
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
TVIAISLGWLISGLIVVENVYNYPGIGRLLTFAIDRRDLLLLQAVAMITVVIFAVANLLA
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
DLMYALLDPRIRLGDERSS
HHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424; 8796346 [H]