Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222524737
Identifier: 222524737
GI number: 222524737
Start: 1858439
End: 1859002
Strand: Direct
Name: 222524737
Synonym: Chy400_1464
Alternate gene names: NA
Gene position: 1858439-1859002 (Clockwise)
Preceding gene: 222524718
Following gene: 222524742
Centisome position: 35.27
GC content: 59.75
Gene sequence:
>564_bases ATGCGCGGTCGTGCAGTGCGTCCGGTAGATCGAGCCGGCGGTGGAGAAGAGGCAATTCGTTTAACCCGGTGCGCAGGCAC CTGGTTGGCCGATCCGCCCGATGCAGATGAGCAGGCGCGGATTGCCGAGGCAGTGCGGGCATTAAACGGTCAACGGGCAT TAGCCCTTGAATTGCACCGCGATCCGGCGGCACTCGACGCTTACTGTGTCGAGTTGTTCCGCGATCCGATGTTTAACCCG CTTCATATCGGGCCGGAGATCATTCGTCGAATTATCGACAAACTCGGTGAACCACCAGTTGCCGACGAGTCAGACCCAAC GGCCTTCTCGCAGTACCTTCAGCAGGCCGTCCTGCTCTTTGCCCTTCCCAATCCGCGTCGGCTGCTGGCAGCGCAGTTGC GCCGCTATTTACCACGCTTTACCACAGCAGGCGATTGGAAGGCGGCGGTGGCGATTGATTACAGTGCGTTCCGCACCTCA CTCGGCAACGAGGTCACTCCATTTCTGGCCCAGATGACGCTGGCCGGTCTGGCCGACTACTACGATGAATTGCCTGATGC GTAG
Upstream 100 bases:
>100_bases TTGTCAGGCAAAAAAGTCAAGTTTTGTGGCAACAATCACGCAGACAGTTCATGCTATACTGGACGGCGCAACGGTTCATT CAAAACAAGAGGGAGAAGCA
Downstream 100 bases:
>100_bases CGCACCGGCTCAATCCATTGGCACAGGGGCGGTGCTTGAACCGTCTCTGCGCCACCAACCACCTCTCTGCTCACACGCAC GGCTGGTCGGCAACCGGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MRGRAVRPVDRAGGGEEAIRLTRCAGTWLADPPDADEQARIAEAVRALNGQRALALELHRDPAALDAYCVELFRDPMFNP LHIGPEIIRRIIDKLGEPPVADESDPTAFSQYLQQAVLLFALPNPRRLLAAQLRRYLPRFTTAGDWKAAVAIDYSAFRTS LGNEVTPFLAQMTLAGLADYYDELPDA
Sequences:
>Translated_187_residues MRGRAVRPVDRAGGGEEAIRLTRCAGTWLADPPDADEQARIAEAVRALNGQRALALELHRDPAALDAYCVELFRDPMFNP LHIGPEIIRRIIDKLGEPPVADESDPTAFSQYLQQAVLLFALPNPRRLLAAQLRRYLPRFTTAGDWKAAVAIDYSAFRTS LGNEVTPFLAQMTLAGLADYYDELPDA >Mature_187_residues MRGRAVRPVDRAGGGEEAIRLTRCAGTWLADPPDADEQARIAEAVRALNGQRALALELHRDPAALDAYCVELFRDPMFNP LHIGPEIIRRIIDKLGEPPVADESDPTAFSQYLQQAVLLFALPNPRRLLAAQLRRYLPRFTTAGDWKAAVAIDYSAFRTS LGNEVTPFLAQMTLAGLADYYDELPDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20673; Mature: 20673
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGRAVRPVDRAGGGEEAIRLTRCAGTWLADPPDADEQARIAEAVRALNGQRALALELHR CCCCCCCCHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECC DPAALDAYCVELFRDPMFNPLHIGPEIIRRIIDKLGEPPVADESDPTAFSQYLQQAVLLF CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH ALPNPRRLLAAQLRRYLPRFTTAGDWKAAVAIDYSAFRTSLGNEVTPFLAQMTLAGLADY CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHH YDELPDA HHHCCCC >Mature Secondary Structure MRGRAVRPVDRAGGGEEAIRLTRCAGTWLADPPDADEQARIAEAVRALNGQRALALELHR CCCCCCCCHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECC DPAALDAYCVELFRDPMFNPLHIGPEIIRRIIDKLGEPPVADESDPTAFSQYLQQAVLLF CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH ALPNPRRLLAAQLRRYLPRFTTAGDWKAAVAIDYSAFRTSLGNEVTPFLAQMTLAGLADY CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHH YDELPDA HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA