Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222524706
Identifier: 222524706
GI number: 222524706
Start: 1819898
End: 1820470
Strand: Direct
Name: 222524706
Synonym: Chy400_1433
Alternate gene names: NA
Gene position: 1819898-1820470 (Clockwise)
Preceding gene: 222524698
Following gene: 222524707
Centisome position: 34.54
GC content: 55.67
Gene sequence:
>573_bases ATGTCGGCGCCCTACACACCCTCTGTAACCAACGAAGAGCAGCGCCGGGCCGTCGATCTCAGTGGTGCTGCGGTACACCT CTTTCGTTTTCGGGGGCCGCTCGATCTCGCTTATGAATACTTCTGCGATGTGCCGGCTGTCTTCAGTCTGCTCCCCGATG TGATTGATGTCCTCACCTATGGCCCTAACCGCTACCGCTTGATCGTCGGAGCAACTGATGGCCACGGCCATGCGATGGCC GGCTACTTCGATGTGGCTGCTGCATTCGAGCCTCATCGCCTGATTCGGATTATGCCGGTTGATGATGGTCCGCCGATTGA CCTTAGTGGTTTTGTCTTCCCAGGTCAGCTCTTTGCTGAGGCCGTGTTTTATCCCCATGCCCACGGTACCGATGTCGAAT ATACGGTTGAACTGGCAATGACCATCCCGGTGCCAAAGGTGCTCTGGTTTATGCCCGGCAGTGTGTTGCAGGCAATTGGC GAGCGGGCAATGGAACACAAGATGAACCATATGATTAGTGGTTTTTCGCGGGCCGTCGATATCGATTTTCACGCCTGGAT CGGCAACGAGTAG
Upstream 100 bases:
>100_bases TTACACTTGCACAAGGCGCACAGAGATGCTATACTGGCGGTAATTGATGTCATATATGAAAGTTGTGTCGGTTCACAAAC CCCGACCACAAGGAGCGTCT
Downstream 100 bases:
>100_bases CCATAATACCTCTCTCAAGCATTGCTTTAAGGCGAGCCGATGTCCTGTCGCGGCTCGCCAATGTTGTGCTATACTATCCA CAAATAGTTCCGCATTCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSAPYTPSVTNEEQRRAVDLSGAAVHLFRFRGPLDLAYEYFCDVPAVFSLLPDVIDVLTYGPNRYRLIVGATDGHGHAMA GYFDVAAAFEPHRLIRIMPVDDGPPIDLSGFVFPGQLFAEAVFYPHAHGTDVEYTVELAMTIPVPKVLWFMPGSVLQAIG ERAMEHKMNHMISGFSRAVDIDFHAWIGNE
Sequences:
>Translated_190_residues MSAPYTPSVTNEEQRRAVDLSGAAVHLFRFRGPLDLAYEYFCDVPAVFSLLPDVIDVLTYGPNRYRLIVGATDGHGHAMA GYFDVAAAFEPHRLIRIMPVDDGPPIDLSGFVFPGQLFAEAVFYPHAHGTDVEYTVELAMTIPVPKVLWFMPGSVLQAIG ERAMEHKMNHMISGFSRAVDIDFHAWIGNE >Mature_189_residues SAPYTPSVTNEEQRRAVDLSGAAVHLFRFRGPLDLAYEYFCDVPAVFSLLPDVIDVLTYGPNRYRLIVGATDGHGHAMAG YFDVAAAFEPHRLIRIMPVDDGPPIDLSGFVFPGQLFAEAVFYPHAHGTDVEYTVELAMTIPVPKVLWFMPGSVLQAIGE RAMEHKMNHMISGFSRAVDIDFHAWIGNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21081; Mature: 20950
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPYTPSVTNEEQRRAVDLSGAAVHLFRFRGPLDLAYEYFCDVPAVFSLLPDVIDVLTY CCCCCCCCCCCHHHHHEECCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHCC GPNRYRLIVGATDGHGHAMAGYFDVAAAFEPHRLIRIMPVDDGPPIDLSGFVFPGQLFAE CCCEEEEEEECCCCCCCEEHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEECHHHHHH AVFYPHAHGTDVEYTVELAMTIPVPKVLWFMPGSVLQAIGERAMEHKMNHMISGFSRAVD HHHCCCCCCCCEEEEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE IDFHAWIGNE EEEEEECCCC >Mature Secondary Structure SAPYTPSVTNEEQRRAVDLSGAAVHLFRFRGPLDLAYEYFCDVPAVFSLLPDVIDVLTY CCCCCCCCCCHHHHHEECCCCCEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHCC GPNRYRLIVGATDGHGHAMAGYFDVAAAFEPHRLIRIMPVDDGPPIDLSGFVFPGQLFAE CCCEEEEEEECCCCCCCEEHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEECHHHHHH AVFYPHAHGTDVEYTVELAMTIPVPKVLWFMPGSVLQAIGERAMEHKMNHMISGFSRAVD HHHCCCCCCCCEEEEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE IDFHAWIGNE EEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA