Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222524688

Identifier: 222524688

GI number: 222524688

Start: 1797687

End: 1798214

Strand: Direct

Name: 222524688

Synonym: Chy400_1415

Alternate gene names: NA

Gene position: 1797687-1798214 (Clockwise)

Preceding gene: 222524687

Following gene: 222524692

Centisome position: 34.12

GC content: 55.68

Gene sequence:

>528_bases
ATGCAGACACGACTTACCCGGAGTAGAACAGATCGCATGATCGGCGGTGTGTGTGGCGGCCTGGCTCGCTACTTCGCCGT
TGATCCGGTCATTGTGCGCTTGATCTTTGTGCTGATCTTTTTCATCAATGGCATTAGCCTGCCGATCTATCTGGTGCTCT
GGCTGATTATGCCAAGAGAGAATCCTCCGACACCCTTCTCCTCGACAGGTAGTGAGGCAAATTTCGCCCCGCAGGAAGCT
TTCGTTAGCCAGAGTCAGGTGAGTGGGCAGGCACGGGTCGGATATGCTCCCGATCCCTCATACCGCTTCGATCCACTTAC
CGGTCAGCCTATCGGTGGCCCGGCAACCAGTGAGACAGTACAACTGACAACGACACCATCGCGTCGCCGTAACTGGAGTT
TACTCGGCATGATTCTGATCGGTGTGGGCGGTATCATTCTGCTTGAGCAATTGGGGGTGAATCTCTCGCTGCTATTCCCC
GTGCTGTTGATTGGGGCCGGCCTGGTGCTGTTGCGACGTGGACGCTAA

Upstream 100 bases:

>100_bases
ACGGTGAGCAGACGTGGTTGCAACTATTTGGTAAAACTTTCGTCAAATTCGCAGAATACGTGGGCACAACTCTTTGGCCC
TGGCTGGAAGGAGCCGATAT

Downstream 100 bases:

>100_bases
ATGAAACCGGTCACATCAGCCAGAAACAGGGAATGAACACTATCGTAGAAGGCCAGGGTAGGGGCGCACGGTCATGCGCC
CCTACCGTGAATTCCCCTGT

Product: phage shock protein PspC

Products: NA

Alternate protein names: PspC Domain-Containing Protein

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MQTRLTRSRTDRMIGGVCGGLARYFAVDPVIVRLIFVLIFFINGISLPIYLVLWLIMPRENPPTPFSSTGSEANFAPQEA
FVSQSQVSGQARVGYAPDPSYRFDPLTGQPIGGPATSETVQLTTTPSRRRNWSLLGMILIGVGGIILLEQLGVNLSLLFP
VLLIGAGLVLLRRGR

Sequences:

>Translated_175_residues
MQTRLTRSRTDRMIGGVCGGLARYFAVDPVIVRLIFVLIFFINGISLPIYLVLWLIMPRENPPTPFSSTGSEANFAPQEA
FVSQSQVSGQARVGYAPDPSYRFDPLTGQPIGGPATSETVQLTTTPSRRRNWSLLGMILIGVGGIILLEQLGVNLSLLFP
VLLIGAGLVLLRRGR
>Mature_175_residues
MQTRLTRSRTDRMIGGVCGGLARYFAVDPVIVRLIFVLIFFINGISLPIYLVLWLIMPRENPPTPFSSTGSEANFAPQEA
FVSQSQVSGQARVGYAPDPSYRFDPLTGQPIGGPATSETVQLTTTPSRRRNWSLLGMILIGVGGIILLEQLGVNLSLLFP
VLLIGAGLVLLRRGR

Specific function: Unknown

COG id: COG1983

COG function: function code KT; Putative stress-responsive transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19056; Mature: 19056

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTRLTRSRTDRMIGGVCGGLARYFAVDPVIVRLIFVLIFFINGISLPIYLVLWLIMPRE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
NPPTPFSSTGSEANFAPQEAFVSQSQVSGQARVGYAPDPSYRFDPLTGQPIGGPATSETV
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEE
QLTTTPSRRRNWSLLGMILIGVGGIILLEQLGVNLSLLFPVLLIGAGLVLLRRGR
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQTRLTRSRTDRMIGGVCGGLARYFAVDPVIVRLIFVLIFFINGISLPIYLVLWLIMPRE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
NPPTPFSSTGSEANFAPQEAFVSQSQVSGQARVGYAPDPSYRFDPLTGQPIGGPATSETV
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEE
QLTTTPSRRRNWSLLGMILIGVGGIILLEQLGVNLSLLFPVLLIGAGLVLLRRGR
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA