| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524688
Identifier: 222524688
GI number: 222524688
Start: 1797687
End: 1798214
Strand: Direct
Name: 222524688
Synonym: Chy400_1415
Alternate gene names: NA
Gene position: 1797687-1798214 (Clockwise)
Preceding gene: 222524687
Following gene: 222524692
Centisome position: 34.12
GC content: 55.68
Gene sequence:
>528_bases ATGCAGACACGACTTACCCGGAGTAGAACAGATCGCATGATCGGCGGTGTGTGTGGCGGCCTGGCTCGCTACTTCGCCGT TGATCCGGTCATTGTGCGCTTGATCTTTGTGCTGATCTTTTTCATCAATGGCATTAGCCTGCCGATCTATCTGGTGCTCT GGCTGATTATGCCAAGAGAGAATCCTCCGACACCCTTCTCCTCGACAGGTAGTGAGGCAAATTTCGCCCCGCAGGAAGCT TTCGTTAGCCAGAGTCAGGTGAGTGGGCAGGCACGGGTCGGATATGCTCCCGATCCCTCATACCGCTTCGATCCACTTAC CGGTCAGCCTATCGGTGGCCCGGCAACCAGTGAGACAGTACAACTGACAACGACACCATCGCGTCGCCGTAACTGGAGTT TACTCGGCATGATTCTGATCGGTGTGGGCGGTATCATTCTGCTTGAGCAATTGGGGGTGAATCTCTCGCTGCTATTCCCC GTGCTGTTGATTGGGGCCGGCCTGGTGCTGTTGCGACGTGGACGCTAA
Upstream 100 bases:
>100_bases ACGGTGAGCAGACGTGGTTGCAACTATTTGGTAAAACTTTCGTCAAATTCGCAGAATACGTGGGCACAACTCTTTGGCCC TGGCTGGAAGGAGCCGATAT
Downstream 100 bases:
>100_bases ATGAAACCGGTCACATCAGCCAGAAACAGGGAATGAACACTATCGTAGAAGGCCAGGGTAGGGGCGCACGGTCATGCGCC CCTACCGTGAATTCCCCTGT
Product: phage shock protein PspC
Products: NA
Alternate protein names: PspC Domain-Containing Protein
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MQTRLTRSRTDRMIGGVCGGLARYFAVDPVIVRLIFVLIFFINGISLPIYLVLWLIMPRENPPTPFSSTGSEANFAPQEA FVSQSQVSGQARVGYAPDPSYRFDPLTGQPIGGPATSETVQLTTTPSRRRNWSLLGMILIGVGGIILLEQLGVNLSLLFP VLLIGAGLVLLRRGR
Sequences:
>Translated_175_residues MQTRLTRSRTDRMIGGVCGGLARYFAVDPVIVRLIFVLIFFINGISLPIYLVLWLIMPRENPPTPFSSTGSEANFAPQEA FVSQSQVSGQARVGYAPDPSYRFDPLTGQPIGGPATSETVQLTTTPSRRRNWSLLGMILIGVGGIILLEQLGVNLSLLFP VLLIGAGLVLLRRGR >Mature_175_residues MQTRLTRSRTDRMIGGVCGGLARYFAVDPVIVRLIFVLIFFINGISLPIYLVLWLIMPRENPPTPFSSTGSEANFAPQEA FVSQSQVSGQARVGYAPDPSYRFDPLTGQPIGGPATSETVQLTTTPSRRRNWSLLGMILIGVGGIILLEQLGVNLSLLFP VLLIGAGLVLLRRGR
Specific function: Unknown
COG id: COG1983
COG function: function code KT; Putative stress-responsive transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19056; Mature: 19056
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTRLTRSRTDRMIGGVCGGLARYFAVDPVIVRLIFVLIFFINGISLPIYLVLWLIMPRE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC NPPTPFSSTGSEANFAPQEAFVSQSQVSGQARVGYAPDPSYRFDPLTGQPIGGPATSETV CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEE QLTTTPSRRRNWSLLGMILIGVGGIILLEQLGVNLSLLFPVLLIGAGLVLLRRGR EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQTRLTRSRTDRMIGGVCGGLARYFAVDPVIVRLIFVLIFFINGISLPIYLVLWLIMPRE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC NPPTPFSSTGSEANFAPQEAFVSQSQVSGQARVGYAPDPSYRFDPLTGQPIGGPATSETV CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEE QLTTTPSRRRNWSLLGMILIGVGGIILLEQLGVNLSLLFPVLLIGAGLVLLRRGR EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA