| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524680
Identifier: 222524680
GI number: 222524680
Start: 1790025
End: 1791506
Strand: Direct
Name: 222524680
Synonym: Chy400_1407
Alternate gene names: NA
Gene position: 1790025-1791506 (Clockwise)
Preceding gene: 222524679
Following gene: 222524681
Centisome position: 33.97
GC content: 56.48
Gene sequence:
>1482_bases ATGACAACAACGAACCAACCTACAAACCCACCACCGGCGCCATCGGCGCCGCCGACCGATCAGATCGTTCAGACCCATCA TTCAGTGACGATTAACGGGGTGGAAATCGGCTACACCGCGACTACCGGCATCATCATTATGAAGGAGGAGGCCGAGAAAG ACGGTGTCAGTACCGGTGAACAGGCACGAGCCGGTATCTTCTTTGTCGCCTACACCCGTGATGATGTCACCGACCTGAGT CGGCGGCCAATTACGTTTGCCTTTAATGGTGGCCCAGGTTCATCATCGGTGTGGCTACACCTCGGCTTGCTCGGCCCCCA CCGCGTCTTGATGCAAGAGGAAGGCTGGCCTTTACCACCACCCGGTCGACTGACGCCCAATCAATACTCTTTGCTCGATG TCAGTGATCTCGTCTTCATCGATCCGGTCAGCACCGGCTATAGCCGACCGGTCGCAGGTGAGTCGGCGAAGCAGTTCCAC GATTTTCGCAAAGATATCGAGTCGGTCGGCGATTTCATCCGCCTCTACGTGAGCCGCTATGGACGCTGGCTGTCGCCGAA ATATCTGGCCGGTGAGAGTTACGGTACCACACGGGCAGCCGGTCTGGCCGGCTATCTACAAGAGCGGCATGGCCTCTACC TGAATGGGCTTATGCTGATTTCAGCCGTGCTGCATTTTCAGACCCTCTCGTTCGATCACGGCAACGACTTGCCGTACATG CTCTTCCTGCCGGCCTACACCGCAACTGCCTTCTACCATCGCCGCCTCGAACCAGAGCTACAACGCGATCTGATCACAAC CTTACGTGCGGCAGAGGCGTTTGCCCTTGGCGATTATGCACTGGCCCTGTTGCAAGGTGACCAGCTTGATCCATCCGCTA CCGAGCGCATCATCACCCAACTGGCACGCTATACCGGCCTGAGCCGAGAGTATATTGAACGTTCACGATTACGCATTCGC GATGATCGGTTTGTTAAGGAATTATTGCGCGATCAGCAACGCACAGTTGGTCGGCTTGATAGCCGGTTTACCGGTAGCGA CCGTGACGCGGTAGGCGAAACGGTCGAGTTAGATCCAAGTCTGGCGGCCATTCTTGGCCCGTACACGGCAGCTCTCAACG ACTACGTGCGTCAGCAGTTGGGCTTTAGCAGTGACCTGCCCTATGAAATCCTCACCGAGCGCGTCTGGCCCTGGAGCTTC AACGACCATCAGAACCGCTATGTGGATGTCGCCGAGACCTTGCGCCGGGCAATGCATCGGAATCCAGCTCTGCGGGTACA TGTGGCAAGTGGATACTACGATCTGGCAACCCCCTACTTTGCCACCCGCTATACGCTGAGTCATCTGGCCCTCGATCCGG CACTGCGCAGCCAGATTAGCGAGAGTTTCTATCCTGCTGGCCATATGATGTACATTCACGAACCGTCACTCGCCGCGTTA AAAGCCGTCCTCTCTGACTTTGTAAGCATTGGAGAAAGGTGA
Upstream 100 bases:
>100_bases GGATTAACGAAGCCCTGATTGCGGCCGGCGTGCAGGACGGTGATCTGGTACGGATTGGACGGGCTGAATTAGTCTGGGAT GATAGCGGACAGCATGCCTT
Downstream 100 bases:
>100_bases GTCATGCAAGGCGAACCATGTCACATCTCAGCGCAACGTAAGGCAATCCAGCTCGCGCATGGGCGGGTCAGCTACCTGGA ATGGCCTGCGGACGGACCGG
Product: peptidase S10 serine carboxypeptidase
Products: NA
Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; Serine-Type Carboxypeptidase Family Protein; S10 Family Peptidase; Carboxypeptidase; S10 Family Carboxypeptidase; Carboxypeptidase-Like Protein; Serine Carboxypeptidase Superfamily; Peptidase S
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MTTTNQPTNPPPAPSAPPTDQIVQTHHSVTINGVEIGYTATTGIIIMKEEAEKDGVSTGEQARAGIFFVAYTRDDVTDLS RRPITFAFNGGPGSSSVWLHLGLLGPHRVLMQEEGWPLPPPGRLTPNQYSLLDVSDLVFIDPVSTGYSRPVAGESAKQFH DFRKDIESVGDFIRLYVSRYGRWLSPKYLAGESYGTTRAAGLAGYLQERHGLYLNGLMLISAVLHFQTLSFDHGNDLPYM LFLPAYTATAFYHRRLEPELQRDLITTLRAAEAFALGDYALALLQGDQLDPSATERIITQLARYTGLSREYIERSRLRIR DDRFVKELLRDQQRTVGRLDSRFTGSDRDAVGETVELDPSLAAILGPYTAALNDYVRQQLGFSSDLPYEILTERVWPWSF NDHQNRYVDVAETLRRAMHRNPALRVHVASGYYDLATPYFATRYTLSHLALDPALRSQISESFYPAGHMMYIHEPSLAAL KAVLSDFVSIGER
Sequences:
>Translated_493_residues MTTTNQPTNPPPAPSAPPTDQIVQTHHSVTINGVEIGYTATTGIIIMKEEAEKDGVSTGEQARAGIFFVAYTRDDVTDLS RRPITFAFNGGPGSSSVWLHLGLLGPHRVLMQEEGWPLPPPGRLTPNQYSLLDVSDLVFIDPVSTGYSRPVAGESAKQFH DFRKDIESVGDFIRLYVSRYGRWLSPKYLAGESYGTTRAAGLAGYLQERHGLYLNGLMLISAVLHFQTLSFDHGNDLPYM LFLPAYTATAFYHRRLEPELQRDLITTLRAAEAFALGDYALALLQGDQLDPSATERIITQLARYTGLSREYIERSRLRIR DDRFVKELLRDQQRTVGRLDSRFTGSDRDAVGETVELDPSLAAILGPYTAALNDYVRQQLGFSSDLPYEILTERVWPWSF NDHQNRYVDVAETLRRAMHRNPALRVHVASGYYDLATPYFATRYTLSHLALDPALRSQISESFYPAGHMMYIHEPSLAAL KAVLSDFVSIGER >Mature_492_residues TTTNQPTNPPPAPSAPPTDQIVQTHHSVTINGVEIGYTATTGIIIMKEEAEKDGVSTGEQARAGIFFVAYTRDDVTDLSR RPITFAFNGGPGSSSVWLHLGLLGPHRVLMQEEGWPLPPPGRLTPNQYSLLDVSDLVFIDPVSTGYSRPVAGESAKQFHD FRKDIESVGDFIRLYVSRYGRWLSPKYLAGESYGTTRAAGLAGYLQERHGLYLNGLMLISAVLHFQTLSFDHGNDLPYML FLPAYTATAFYHRRLEPELQRDLITTLRAAEAFALGDYALALLQGDQLDPSATERIITQLARYTGLSREYIERSRLRIRD DRFVKELLRDQQRTVGRLDSRFTGSDRDAVGETVELDPSLAAILGPYTAALNDYVRQQLGFSSDLPYEILTERVWPWSFN DHQNRYVDVAETLRRAMHRNPALRVHVASGYYDLATPYFATRYTLSHLALDPALRSQISESFYPAGHMMYIHEPSLAALK AVLSDFVSIGER
Specific function: Unknown
COG id: COG2939
COG function: function code E; Carboxypeptidase C (cathepsin A)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55268; Mature: 55137
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTNQPTNPPPAPSAPPTDQIVQTHHSVTINGVEIGYTATTGIIIMKEEAEKDGVSTGE CCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEEEEEEEECEEEEEECCCCCCCCCCCC QARAGIFFVAYTRDDVTDLSRRPITFAFNGGPGSSSVWLHLGLLGPHRVLMQEEGWPLPP CCCCCEEEEEECCCCHHHHCCCCEEEEECCCCCCCEEEEEEECCCCHHHHCCCCCCCCCC PGRLTPNQYSLLDVSDLVFIDPVSTGYSRPVAGESAKQFHDFRKDIESVGDFIRLYVSRY CCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GRWLSPKYLAGESYGTTRAAGLAGYLQERHGLYLNGLMLISAVLHFQTLSFDHGNDLPYM CCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCCCCCCCCEE LFLPAYTATAFYHRRLEPELQRDLITTLRAAEAFALGDYALALLQGDQLDPSATERIITQ EEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHH LARYTGLSREYIERSRLRIRDDRFVKELLRDQQRTVGRLDSRFTGSDRDAVGETVELDPS HHHHCCCCHHHHHHHHHHEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEECCCH LAAILGPYTAALNDYVRQQLGFSSDLPYEILTERVWPWSFNDHQNRYVDVAETLRRAMHR HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHC NPALRVHVASGYYDLATPYFATRYTLSHLALDPALRSQISESFYPAGHMMYIHEPSLAAL CCCEEEEEECCCCHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEECCHHHHH KAVLSDFVSIGER HHHHHHHHHHCCC >Mature Secondary Structure TTTNQPTNPPPAPSAPPTDQIVQTHHSVTINGVEIGYTATTGIIIMKEEAEKDGVSTGE CCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEEEEEEEECEEEEEECCCCCCCCCCCC QARAGIFFVAYTRDDVTDLSRRPITFAFNGGPGSSSVWLHLGLLGPHRVLMQEEGWPLPP CCCCCEEEEEECCCCHHHHCCCCEEEEECCCCCCCEEEEEEECCCCHHHHCCCCCCCCCC PGRLTPNQYSLLDVSDLVFIDPVSTGYSRPVAGESAKQFHDFRKDIESVGDFIRLYVSRY CCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GRWLSPKYLAGESYGTTRAAGLAGYLQERHGLYLNGLMLISAVLHFQTLSFDHGNDLPYM CCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCCCCCCCCEE LFLPAYTATAFYHRRLEPELQRDLITTLRAAEAFALGDYALALLQGDQLDPSATERIITQ EEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHH LARYTGLSREYIERSRLRIRDDRFVKELLRDQQRTVGRLDSRFTGSDRDAVGETVELDPS HHHHCCCCHHHHHHHHHHEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCEEECCCH LAAILGPYTAALNDYVRQQLGFSSDLPYEILTERVWPWSFNDHQNRYVDVAETLRRAMHR HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHC NPALRVHVASGYYDLATPYFATRYTLSHLALDPALRSQISESFYPAGHMMYIHEPSLAAL CCCEEEEEECCCCHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEECCHHHHH KAVLSDFVSIGER HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA