| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524572
Identifier: 222524572
GI number: 222524572
Start: 1661552
End: 1662046
Strand: Direct
Name: 222524572
Synonym: Chy400_1296
Alternate gene names: NA
Gene position: 1661552-1662046 (Clockwise)
Preceding gene: 222524571
Following gene: 222524573
Centisome position: 31.53
GC content: 62.42
Gene sequence:
>495_bases ATGGACGTGCTCCATATAGCTCCCGTTCACCTTGCCCACGCTTCCAGCGGGCTATGCATTACCCACATGTCACGCTGTGT GAGGCCGGACTGCAAGCGCTCCTCGTGGCGTGGGCTTCCAGCCCGCGTGCAGGCATCATCACCACCGCCGGCAGGTGCTG GCCATGACCGCTGGTGCGCAGGCACGCACCTATTACAACATAACCGTCTACACGCAGGGATCGCATGCATGCCTGACCGC CTCGATGCTCGAACGAGCACATCCAGTATCCCCGTGACCAGCATGAGGAACGGTGGGCCACGCGCCGGATCGTGTGTACG CCTGCTGCGGCAGCGTGGCTGCCGCACGCCACACATTGCGCCACGGGTAACACCGCCGGAAACCCGTATCCACCCCGGCG GGTGCAGCGGAAATGACGTTTGCCGGGTCTGTGATCACTCCTGGCGTGATCGTGTGATGTCCCTCATTCACTGCATCCCT TGGATGGTAAGGTGA
Upstream 100 bases:
>100_bases CATGTTTGTATGATAAACGATGCAACCGTCTCGGCTCCCGCACCTCACCCCCTGACCCTCGCTCCGCTTCCATCGGGCGA GTGGGGAGTGGAGAGAGGGG
Downstream 100 bases:
>100_bases ACGGCACAGGCACCGTCCGTAGGGGCGGGTTTAGAACCCGCCCCTACAGCCATCCCCATCATCAGGGTCGCGTAGGCAAC AGGTGCGCGATAGCACAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MDVLHIAPVHLAHASSGLCITHMSRCVRPDCKRSSWRGLPARVQASSPPPAGAGHDRWCAGTHLLQHNRLHAGIACMPDR LDARTSTSSIPVTSMRNGGPRAGSCVRLLRQRGCRTPHIAPRVTPPETRIHPGGCSGNDVCRVCDHSWRDRVMSLIHCIP WMVR
Sequences:
>Translated_164_residues MDVLHIAPVHLAHASSGLCITHMSRCVRPDCKRSSWRGLPARVQASSPPPAGAGHDRWCAGTHLLQHNRLHAGIACMPDR LDARTSTSSIPVTSMRNGGPRAGSCVRLLRQRGCRTPHIAPRVTPPETRIHPGGCSGNDVCRVCDHSWRDRVMSLIHCIP WMVR >Mature_164_residues MDVLHIAPVHLAHASSGLCITHMSRCVRPDCKRSSWRGLPARVQASSPPPAGAGHDRWCAGTHLLQHNRLHAGIACMPDR LDARTSTSSIPVTSMRNGGPRAGSCVRLLRQRGCRTPHIAPRVTPPETRIHPGGCSGNDVCRVCDHSWRDRVMSLIHCIP WMVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17993; Mature: 17993
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 10.4 %Cys+Met (Translated Protein) 6.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 10.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVLHIAPVHLAHASSGLCITHMSRCVRPDCKRSSWRGLPARVQASSPPPAGAGHDRWCA CCCEECCCHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHH GTHLLQHNRLHAGIACMPDRLDARTSTSSIPVTSMRNGGPRAGSCVRLLRQRGCRTPHIA HHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC PRVTPPETRIHPGGCSGNDVCRVCDHSWRDRVMSLIHCIPWMVR CCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDVLHIAPVHLAHASSGLCITHMSRCVRPDCKRSSWRGLPARVQASSPPPAGAGHDRWCA CCCEECCCHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHH GTHLLQHNRLHAGIACMPDRLDARTSTSSIPVTSMRNGGPRAGSCVRLLRQRGCRTPHIA HHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC PRVTPPETRIHPGGCSGNDVCRVCDHSWRDRVMSLIHCIPWMVR CCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA