| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yycG [H]
Identifier: 222524558
GI number: 222524558
Start: 1641440
End: 1643668
Strand: Direct
Name: yycG [H]
Synonym: Chy400_1282
Alternate gene names: 222524558
Gene position: 1641440-1643668 (Clockwise)
Preceding gene: 222524557
Following gene: 222524559
Centisome position: 31.15
GC content: 56.75
Gene sequence:
>2229_bases ATGACTGAACACCAGCCAGAGCTTAGCGCATCTGATCAGATGATAGAGCGAGCAGTGTCAGGTGAGGGTATCCAGCACTG GCTCAAGATCAGTGCGGCCTGGCTGGCCTTGCAAGAACCAGAACGCCTCTTTCCGACCCTGGTCTCCAGTTTTGCCGAAC ATTTACCGGCTGTGCGCACCGTCATTCTCTGGCTCGTTACCACGGGCGGCTTGCAACCGGTAGCTCACGCCGGGTTCACG ATACCGTCTGCAATCAGTGAACACTGGTTGCGGGTCAGATTGCGACCTGGAGAAGGAGCCGCCGGGCTGGCCTGGCAGCG TGAGACGGTGATCCAACAACACGGCGAACACGGCTATCGTGAATTGCAGGGTATTGCATCCCCCCAGGCACAGACGGTCT TTCAGGCAATCGGTGATCTCTTACCGCGCAGCCTGCTGGTGACCGCTATCCCACTGCGCGCAGGGCACACGCTGGTAGGG GTGCTGGAGCTGGCCAGCAATGCCAATGAGCCACTTGGTATAGAGATGGCCGATTTCGAGGTTATCGCCGGTATCGTTGC CGCAGCCATTCGCAACGCCCAATTGTACGATGAACTCCGGCGCAGCCACCAACGGCTGAAAGCGTTTGATGCAGTTGTAA CGTCGATCAGCACTGCTGCCGATCTGCCCGATCTGGTGCAGAGTGTTTTGACCGTTGTCCTCGAATTGACCCCTGCCCAG AGTGGTGCGCTCCTGATCTTCGATCCGGCCCAGGAACGTCTACAGGTCAGTGCCTGGTGTAACATTGACCTGACTGCTCT TGCCTGTTTCGACCAGGTGTCGGTTGATGCGACTCCCTGTGCAGAAGTTGTTCGTTACGGCCAGCCGGCATTTCGGCCAC TGCTCAGCGAGCGTGGCGAATCGGCGTTGATCGAGGCCGGTATGGCGGCGGCGGCCTATCTACCGCTGCTCGCCGGCGGT ACTGTGACCGGTGTGCTGGCGCTGTTCGGCGATATCGAACTCACCAAGGCAATTGACAAAGACATGCTGATGCCGATCTG TAATCAGGTCGGTTTCGCGATTGCTAACGTGCGGTTGTATGAAGATAGCCAACACGAGCGGAGAAAATTCCATACGGTGA TCGAGTCGATTGCCGAGGGGGTGTTACTGTGTGATCGTTACGGTCGTTTAACCCTGGCCAACCAGGCTGCCCACGATCTT CTCTCCTGCGCAACGCTGAGCTTCGAGACACCCCTGGCAACTGTTCCTGATCTGTACGATCTGCGCGATCTCGATGGGAA TGCTCTGACGCCTGATGATTTACCATTTACCCGCGCTTTGCGTGGCGAAACGTTTTACGATTATCGGGTGATGCGACGCC TGCCCGATAACAGTGAGCGCTTCTTCAGCTTCAGTGGCGCCCCAGCGGTTAACGAACAGGGTGAAGTTGAAGGCGCAGTG ATTACGTTCCGCGACATTACTGCAACCCAAAAGGTGCAGCGGGCAAAGGATGAATTTCTGGCCGTAGCCGCCCATGAATT ACGCAGCCCGCTGGCAGCGGTACGCAGTTATGCCGATCTTTTGTTGCGACGAGAACAACAGCGGGAGGGGGATCATCGCG ATTTGCACGGCTTGACGATCCTCTCGCAACAGGTGGCGCATATGCTCCGCCTGGTGGATAATCTCCTCGATGTTTCGCGC CTTGATGCCGGCCAGTTTGATTTGCAATATCAACAGGTCAATCTCGTCGGGCTGGCTCAGCAGGTGATCGATCAACAACG ACCAAACGCCGGTCAACGCGATTTACTGCTTGAGGCCGAGTCGGCGGAATTGATGGTAACCTGCGATGCGATGCGTATCC GGCAGGTACTGACAAATCTGATCAGCAACGCTATCAAGTACAGTCCACCCGACAGTGTGATCAGCGTGCGTCTCCGCAGC GCGACTCTGCTAAACAACAATGCACCTGCGGTGCTGATCAGTGTCAGTGATCAGGGGCCGGGCATTCCCCCTGAAGAGCA GGAGCGCGTGTTTCAGCGCTACTATCGTGCACCTGGCCGCCGGGCAGAGGGGTTGGGGTTGGGCTTGTATCTAAGCCGTG AGATTGTTCAGTTGCACGGTGGTCAGATTTGGATTGAGAGTCGCGAGGGTCAGGGCAGCACGTTTATGGTGCTGTTACCG GTTGAACGAATGCAGCGTTCACGTACTGAGCGGATGAATCGCTCTTTTGAACTGTCAGCGGAGATTTGA
Upstream 100 bases:
>100_bases ATATTCGGCAGGCCCGCGAATTGTTGGGATTCAACCCGCAAGTACCGTTAGCGGAAGGTATCAACCGCGCCGTGGCCTGG TCGCACGGAGAGTTGCTACG
Downstream 100 bases:
>100_bases TGTGCCGATCCGTAAGAAAGCGTTTCTTCAGGCTTTATCGCCAACGCCACCACCTCGCCGATCATCGACCGGTGTCGTCG TTGCCCGTCTGTCCGCCAAT
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 742; Mature: 741
Protein sequence:
>742_residues MTEHQPELSASDQMIERAVSGEGIQHWLKISAAWLALQEPERLFPTLVSSFAEHLPAVRTVILWLVTTGGLQPVAHAGFT IPSAISEHWLRVRLRPGEGAAGLAWQRETVIQQHGEHGYRELQGIASPQAQTVFQAIGDLLPRSLLVTAIPLRAGHTLVG VLELASNANEPLGIEMADFEVIAGIVAAAIRNAQLYDELRRSHQRLKAFDAVVTSISTAADLPDLVQSVLTVVLELTPAQ SGALLIFDPAQERLQVSAWCNIDLTALACFDQVSVDATPCAEVVRYGQPAFRPLLSERGESALIEAGMAAAAYLPLLAGG TVTGVLALFGDIELTKAIDKDMLMPICNQVGFAIANVRLYEDSQHERRKFHTVIESIAEGVLLCDRYGRLTLANQAAHDL LSCATLSFETPLATVPDLYDLRDLDGNALTPDDLPFTRALRGETFYDYRVMRRLPDNSERFFSFSGAPAVNEQGEVEGAV ITFRDITATQKVQRAKDEFLAVAAHELRSPLAAVRSYADLLLRREQQREGDHRDLHGLTILSQQVAHMLRLVDNLLDVSR LDAGQFDLQYQQVNLVGLAQQVIDQQRPNAGQRDLLLEAESAELMVTCDAMRIRQVLTNLISNAIKYSPPDSVISVRLRS ATLLNNNAPAVLISVSDQGPGIPPEEQERVFQRYYRAPGRRAEGLGLGLYLSREIVQLHGGQIWIESREGQGSTFMVLLP VERMQRSRTERMNRSFELSAEI
Sequences:
>Translated_742_residues MTEHQPELSASDQMIERAVSGEGIQHWLKISAAWLALQEPERLFPTLVSSFAEHLPAVRTVILWLVTTGGLQPVAHAGFT IPSAISEHWLRVRLRPGEGAAGLAWQRETVIQQHGEHGYRELQGIASPQAQTVFQAIGDLLPRSLLVTAIPLRAGHTLVG VLELASNANEPLGIEMADFEVIAGIVAAAIRNAQLYDELRRSHQRLKAFDAVVTSISTAADLPDLVQSVLTVVLELTPAQ SGALLIFDPAQERLQVSAWCNIDLTALACFDQVSVDATPCAEVVRYGQPAFRPLLSERGESALIEAGMAAAAYLPLLAGG TVTGVLALFGDIELTKAIDKDMLMPICNQVGFAIANVRLYEDSQHERRKFHTVIESIAEGVLLCDRYGRLTLANQAAHDL LSCATLSFETPLATVPDLYDLRDLDGNALTPDDLPFTRALRGETFYDYRVMRRLPDNSERFFSFSGAPAVNEQGEVEGAV ITFRDITATQKVQRAKDEFLAVAAHELRSPLAAVRSYADLLLRREQQREGDHRDLHGLTILSQQVAHMLRLVDNLLDVSR LDAGQFDLQYQQVNLVGLAQQVIDQQRPNAGQRDLLLEAESAELMVTCDAMRIRQVLTNLISNAIKYSPPDSVISVRLRS ATLLNNNAPAVLISVSDQGPGIPPEEQERVFQRYYRAPGRRAEGLGLGLYLSREIVQLHGGQIWIESREGQGSTFMVLLP VERMQRSRTERMNRSFELSAEI >Mature_741_residues TEHQPELSASDQMIERAVSGEGIQHWLKISAAWLALQEPERLFPTLVSSFAEHLPAVRTVILWLVTTGGLQPVAHAGFTI PSAISEHWLRVRLRPGEGAAGLAWQRETVIQQHGEHGYRELQGIASPQAQTVFQAIGDLLPRSLLVTAIPLRAGHTLVGV LELASNANEPLGIEMADFEVIAGIVAAAIRNAQLYDELRRSHQRLKAFDAVVTSISTAADLPDLVQSVLTVVLELTPAQS GALLIFDPAQERLQVSAWCNIDLTALACFDQVSVDATPCAEVVRYGQPAFRPLLSERGESALIEAGMAAAAYLPLLAGGT VTGVLALFGDIELTKAIDKDMLMPICNQVGFAIANVRLYEDSQHERRKFHTVIESIAEGVLLCDRYGRLTLANQAAHDLL SCATLSFETPLATVPDLYDLRDLDGNALTPDDLPFTRALRGETFYDYRVMRRLPDNSERFFSFSGAPAVNEQGEVEGAVI TFRDITATQKVQRAKDEFLAVAAHELRSPLAAVRSYADLLLRREQQREGDHRDLHGLTILSQQVAHMLRLVDNLLDVSRL DAGQFDLQYQQVNLVGLAQQVIDQQRPNAGQRDLLLEAESAELMVTCDAMRIRQVLTNLISNAIKYSPPDSVISVRLRSA TLLNNNAPAVLISVSDQGPGIPPEEQERVFQRYYRAPGRRAEGLGLGLYLSREIVQLHGGQIWIESREGQGSTFMVLLPV ERMQRSRTERMNRSFELSAEI
Specific function: Member of the two-component regulatory system YycG/YycF involved in the regulation of the ftsAZ operon, the yocH and ykvT, cwlO, lytE, ydjM, yjeA, yoeB genes and the tagAB and tagDEF operons. Probably phosphorylates YycF [H]
COG id: COG5002
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1788713, Length=248, Percent_Identity=30.241935483871, Blast_Score=120, Evalue=3e-28, Organism=Escherichia coli, GI1788549, Length=377, Percent_Identity=27.8514588859416, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1786600, Length=430, Percent_Identity=25.3488372093023, Blast_Score=108, Evalue=2e-24, Organism=Escherichia coli, GI48994928, Length=295, Percent_Identity=27.4576271186441, Blast_Score=106, Evalue=5e-24, Organism=Escherichia coli, GI1789149, Length=252, Percent_Identity=30.952380952381, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI145693157, Length=240, Percent_Identity=26.25, Blast_Score=96, Evalue=8e-21, Organism=Escherichia coli, GI1786912, Length=229, Percent_Identity=28.82096069869, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1786783, Length=251, Percent_Identity=28.2868525896414, Blast_Score=92, Evalue=2e-19, Organism=Escherichia coli, GI1790436, Length=224, Percent_Identity=30.8035714285714, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1790551, Length=250, Percent_Identity=31.2, Blast_Score=87, Evalue=6e-18, Organism=Escherichia coli, GI87081816, Length=257, Percent_Identity=29.9610894941634, Blast_Score=86, Evalue=7e-18, Organism=Escherichia coli, GI1788393, Length=252, Percent_Identity=28.968253968254, Blast_Score=86, Evalue=8e-18, Organism=Escherichia coli, GI1789403, Length=263, Percent_Identity=30.0380228136882, Blast_Score=86, Evalue=1e-17, Organism=Escherichia coli, GI1790861, Length=222, Percent_Identity=29.2792792792793, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI1788279, Length=199, Percent_Identity=26.1306532663317, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI87082128, Length=302, Percent_Identity=25.4966887417219, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1790300, Length=371, Percent_Identity=26.4150943396226, Blast_Score=73, Evalue=7e-14, Organism=Escherichia coli, GI1790346, Length=241, Percent_Identity=25.3112033195021, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1787894, Length=237, Percent_Identity=27.8481012658228, Blast_Score=68, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 81805; Mature: 81674
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS50113 PAC ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEHQPELSASDQMIERAVSGEGIQHWLKISAAWLALQEPERLFPTLVSSFAEHLPAVRT CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VILWLVTTGGLQPVAHAGFTIPSAISEHWLRVRLRPGEGAAGLAWQRETVIQQHGEHGYR HHHHHHHCCCCCHHHHCCCCCHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHCCCHHHH ELQGIASPQAQTVFQAIGDLLPRSLLVTAIPLRAGHTLVGVLELASNANEPLGIEMADFE HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHH VIAGIVAAAIRNAQLYDELRRSHQRLKAFDAVVTSISTAADLPDLVQSVLTVVLELTPAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC SGALLIFDPAQERLQVSAWCNIDLTALACFDQVSVDATPCAEVVRYGQPAFRPLLSERGE CCEEEEECCCHHHEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHCCCC SALIEAGMAAAAYLPLLAGGTVTGVLALFGDIELTKAIDKDMLMPICNQVGFAIANVRLY HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEE EDSQHERRKFHTVIESIAEGVLLCDRYGRLTLANQAAHDLLSCATLSFETPLATVPDLYD CCCHHHHHHHHHHHHHHHHHHEEHHCCCCEEECHHHHHHHHHHHHHCCCCCCCCCCCCHH LRDLDGNALTPDDLPFTRALRGETFYDYRVMRRLPDNSERFFSFSGAPAVNEQGEVEGAV HHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCHHEEEECCCCCCCCCCCCCEEE ITFRDITATQKVQRAKDEFLAVAAHELRSPLAAVRSYADLLLRREQQREGDHRDLHGLTI EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LSQQVAHMLRLVDNLLDVSRLDAGQFDLQYQQVNLVGLAQQVIDQQRPNAGQRDLLLEAE HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC SAELMVTCDAMRIRQVLTNLISNAIKYSPPDSVISVRLRSATLLNNNAPAVLISVSDQGP CCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEHHHEEECCCCCEEEEEECCCCC GIPPEEQERVFQRYYRAPGRRAEGLGLGLYLSREIVQLHGGQIWIESREGQGSTFMVLLP CCCCHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEC VERMQRSRTERMNRSFELSAEI HHHHHHHHHHHCCCCEEEEECC >Mature Secondary Structure TEHQPELSASDQMIERAVSGEGIQHWLKISAAWLALQEPERLFPTLVSSFAEHLPAVRT CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VILWLVTTGGLQPVAHAGFTIPSAISEHWLRVRLRPGEGAAGLAWQRETVIQQHGEHGYR HHHHHHHCCCCCHHHHCCCCCHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHCCCHHHH ELQGIASPQAQTVFQAIGDLLPRSLLVTAIPLRAGHTLVGVLELASNANEPLGIEMADFE HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHH VIAGIVAAAIRNAQLYDELRRSHQRLKAFDAVVTSISTAADLPDLVQSVLTVVLELTPAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC SGALLIFDPAQERLQVSAWCNIDLTALACFDQVSVDATPCAEVVRYGQPAFRPLLSERGE CCEEEEECCCHHHEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHCCCC SALIEAGMAAAAYLPLLAGGTVTGVLALFGDIELTKAIDKDMLMPICNQVGFAIANVRLY HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEE EDSQHERRKFHTVIESIAEGVLLCDRYGRLTLANQAAHDLLSCATLSFETPLATVPDLYD CCCHHHHHHHHHHHHHHHHHHEEHHCCCCEEECHHHHHHHHHHHHHCCCCCCCCCCCCHH LRDLDGNALTPDDLPFTRALRGETFYDYRVMRRLPDNSERFFSFSGAPAVNEQGEVEGAV HHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCHHEEEECCCCCCCCCCCCCEEE ITFRDITATQKVQRAKDEFLAVAAHELRSPLAAVRSYADLLLRREQQREGDHRDLHGLTI EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LSQQVAHMLRLVDNLLDVSRLDAGQFDLQYQQVNLVGLAQQVIDQQRPNAGQRDLLLEAE HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC SAELMVTCDAMRIRQVLTNLISNAIKYSPPDSVISVRLRSATLLNNNAPAVLISVSDQGP CCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEHHHEEECCCCCEEEEEECCCCC GIPPEEQERVFQRYYRAPGRRAEGLGLGLYLSREIVQLHGGQIWIESREGQGSTFMVLLP CCCCHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEC VERMQRSRTERMNRSFELSAEI HHHHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 9829949; 10878122; 11758928 [H]