| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524301
Identifier: 222524301
GI number: 222524301
Start: 1304646
End: 1305065
Strand: Reverse
Name: 222524301
Synonym: Chy400_1024
Alternate gene names: NA
Gene position: 1305065-1304646 (Counterclockwise)
Preceding gene: 222524302
Following gene: 222524300
Centisome position: 24.77
GC content: 52.14
Gene sequence:
>420_bases ATGGCTGTTGCAACTACTCCAGTGCGTCGTGGTGTCGCTATTAAGCCACTGCACGTTGTTGGTCTGGGAATTATTTTGCT GGCAGTCGTCTACGGCTTTTTTGGCTTCCAGGATGGCTTCCGTGCCTACACTACCAGTGTTGACGAGGCAATGAGCAGCA CGCGAAGTGTTCAGTTGGCCGGCTTCCTGGGCAGTACCGGCGAGATGGATGAACGGGGTCGGTTTACCTTTATGCTGCAA GATGAGAATGGGAAACTGATCAAAGTCATCTCGGATGATCCGCGACCGGCAAATTTCGAGCAGGCGATTAGTATTGTCGC CATTGGCCGCTACGATCCGACCGAGCAGGCATTCATGGCAGATGATCTGTTGGTGAAATGCCCGTCGAAGTATCAGGAAA TGAACCAGGCAAAGCCATAA
Upstream 100 bases:
>100_bases TCGGAACCGCTACCACCGGTGGCTGAAGTGAGTCGGGTGCGTGAAACCGGTATTCCTGACGAGCCGGTTGAGCGCCGTTG AACTATCTGGTGAGGAAGAT
Downstream 100 bases:
>100_bases GCGAAGGCGACAGCCGCAACACGGTCATTGCTGGTACGTTTTCACCGTCTATTGGCTTTGACCGCTGGAAAGAGTTGCTA TGTATCTCTTTGGTACGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MAVATTPVRRGVAIKPLHVVGLGIILLAVVYGFFGFQDGFRAYTTSVDEAMSSTRSVQLAGFLGSTGEMDERGRFTFMLQ DENGKLIKVISDDPRPANFEQAISIVAIGRYDPTEQAFMADDLLVKCPSKYQEMNQAKP
Sequences:
>Translated_139_residues MAVATTPVRRGVAIKPLHVVGLGIILLAVVYGFFGFQDGFRAYTTSVDEAMSSTRSVQLAGFLGSTGEMDERGRFTFMLQ DENGKLIKVISDDPRPANFEQAISIVAIGRYDPTEQAFMADDLLVKCPSKYQEMNQAKP >Mature_138_residues AVATTPVRRGVAIKPLHVVGLGIILLAVVYGFFGFQDGFRAYTTSVDEAMSSTRSVQLAGFLGSTGEMDERGRFTFMLQD ENGKLIKVISDDPRPANFEQAISIVAIGRYDPTEQAFMADDLLVKCPSKYQEMNQAKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15241; Mature: 15110
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVATTPVRRGVAIKPLHVVGLGIILLAVVYGFFGFQDGFRAYTTSVDEAMSSTRSVQLA CCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEE GFLGSTGEMDERGRFTFMLQDENGKLIKVISDDPRPANFEQAISIVAIGRYDPTEQAFMA EECCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHEEEEEECCCCCCCHHHHH DDLLVKCPSKYQEMNQAKP HHHHHCCCHHHHHHHCCCC >Mature Secondary Structure AVATTPVRRGVAIKPLHVVGLGIILLAVVYGFFGFQDGFRAYTTSVDEAMSSTRSVQLA CCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEE GFLGSTGEMDERGRFTFMLQDENGKLIKVISDDPRPANFEQAISIVAIGRYDPTEQAFMA EECCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHEEEEEECCCCCCCHHHHH DDLLVKCPSKYQEMNQAKP HHHHHCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA