| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524216
Identifier: 222524216
GI number: 222524216
Start: 1181729
End: 1182571
Strand: Reverse
Name: 222524216
Synonym: Chy400_0937
Alternate gene names: NA
Gene position: 1182571-1181729 (Counterclockwise)
Preceding gene: 222524217
Following gene: 222524210
Centisome position: 22.44
GC content: 59.55
Gene sequence:
>843_bases ATGAGCAGCGAACACGATCCCCGTAACCGGCTCAACGACCTCGATGCGCGGGAGTGGACGTATGCGCTGCGTTCTGTCAT CAGCACTGCGTATCCAACCCGTGGGCCGGAGAGCTTTGCCCACCATCTCCGTCGTCAGCACCCCTCACCCAAACCGCCCC AACTTATGGCCGAACTCATCCGCTTCTTCACCCGCCAGCATGGTCACGTGCTCGATCCGTTTGCCGGGGTTGGTGGTACG CTGATCGCCAGTTCGCTGGAGGGGCGCACGGCAGTCGGTATCGATCTTTCAGCCGAATATGCAACCATCTACCAGGCGGT TTGTGCTGAGCTACAGATCGCGCCGCAAACCTATGTGGTTGGCGATGCCCGTAATCTGCTCGAACTGCCGGAGGTGCGGG AACGACCGTTTGATCTGATTCTGACCGATCCGCCATATGCGGCCATGATGGCGCGCCCGAAAACCGGCGAGCGGCGTAAA CGCGGTCGGCCCAATCCCACGCCGTTCACAACATCAGCGGCGGATTTGGGCAATCTGCCATACCACGAGTTTATCGGTGA ACTATGCACCATCCTCACCGCTGCGCTCCAGGTGTTGCGTCCCGGCGGGTATCTGGTGATCTTTGCCAAAGACCTGCAAC CCACTCCTGAGCACCACAACATGCTCCACGCCGATCTGGTGATTGCCCTGCGCCAGGTACCGGGGCTTGAGTATCGTGGC TACCGGATATGGCACGACCAGAGTCAGCGACTGTACCCGTTTGGCTACCCGTATGCGTTCGTGGCAAATCAGATGCACCA GTTTATTCTGATCTTTCGCTGGCGGGGGGATGGGAAGGGGTGA
Upstream 100 bases:
>100_bases AGGCCGGGAAGGTGGCCGGGGGAGAGACGGCCACCTTCTGCGTTACCCATGCCTGCGCCAGACCGAATCAAGACACCGTG CAGATGTAGAGCAGAACGCC
Downstream 100 bases:
>100_bases GGTTCTGAAAGGTAGAAGTCATCTCTTTAATCTTAGAATACGAGAAGCTATCTCATTCATTGCCGACTGATTCCATGATC GTGACGAGCACACACAGCAT
Product: putative RNA methylase
Products: NA
Alternate protein names: DNA Methylase N-4/N-6 Domain-Containing Protein; DNA Methylase N-4/N-6 Domain Protein; Adenine-Specific DNA Methylase; DNA Methylase-Like Protein; DNA Methylase; Site-Specific DNA-Methyltransferase; DNA Methylase
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MSSEHDPRNRLNDLDAREWTYALRSVISTAYPTRGPESFAHHLRRQHPSPKPPQLMAELIRFFTRQHGHVLDPFAGVGGT LIASSLEGRTAVGIDLSAEYATIYQAVCAELQIAPQTYVVGDARNLLELPEVRERPFDLILTDPPYAAMMARPKTGERRK RGRPNPTPFTTSAADLGNLPYHEFIGELCTILTAALQVLRPGGYLVIFAKDLQPTPEHHNMLHADLVIALRQVPGLEYRG YRIWHDQSQRLYPFGYPYAFVANQMHQFILIFRWRGDGKG
Sequences:
>Translated_280_residues MSSEHDPRNRLNDLDAREWTYALRSVISTAYPTRGPESFAHHLRRQHPSPKPPQLMAELIRFFTRQHGHVLDPFAGVGGT LIASSLEGRTAVGIDLSAEYATIYQAVCAELQIAPQTYVVGDARNLLELPEVRERPFDLILTDPPYAAMMARPKTGERRK RGRPNPTPFTTSAADLGNLPYHEFIGELCTILTAALQVLRPGGYLVIFAKDLQPTPEHHNMLHADLVIALRQVPGLEYRG YRIWHDQSQRLYPFGYPYAFVANQMHQFILIFRWRGDGKG >Mature_279_residues SSEHDPRNRLNDLDAREWTYALRSVISTAYPTRGPESFAHHLRRQHPSPKPPQLMAELIRFFTRQHGHVLDPFAGVGGTL IASSLEGRTAVGIDLSAEYATIYQAVCAELQIAPQTYVVGDARNLLELPEVRERPFDLILTDPPYAAMMARPKTGERRKR GRPNPTPFTTSAADLGNLPYHEFIGELCTILTAALQVLRPGGYLVIFAKDLQPTPEHHNMLHADLVIALRQVPGLEYRGY RIWHDQSQRLYPFGYPYAFVANQMHQFILIFRWRGDGKG
Specific function: Unknown
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31710; Mature: 31578
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSEHDPRNRLNDLDAREWTYALRSVISTAYPTRGPESFAHHLRRQHPSPKPPQLMAELI CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH RFFTRQHGHVLDPFAGVGGTLIASSLEGRTAVGIDLSAEYATIYQAVCAELQIAPQTYVV HHHHHCCCCCCCCHHCCCHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHEECCCEEEE GDARNLLELPEVRERPFDLILTDPPYAAMMARPKTGERRKRGRPNPTPFTTSAADLGNLP CCCHHHHHCHHHHCCCCEEEEECCCHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHCCCC YHEFIGELCTILTAALQVLRPGGYLVIFAKDLQPTPEHHNMLHADLVIALRQVPGLEYRG HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC YRIWHDQSQRLYPFGYPYAFVANQMHQFILIFRWRGDGKG EEEEECCCCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCC >Mature Secondary Structure SSEHDPRNRLNDLDAREWTYALRSVISTAYPTRGPESFAHHLRRQHPSPKPPQLMAELI CCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH RFFTRQHGHVLDPFAGVGGTLIASSLEGRTAVGIDLSAEYATIYQAVCAELQIAPQTYVV HHHHHCCCCCCCCHHCCCHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHEECCCEEEE GDARNLLELPEVRERPFDLILTDPPYAAMMARPKTGERRKRGRPNPTPFTTSAADLGNLP CCCHHHHHCHHHHCCCCEEEEECCCHHHHHCCCCCCHHHHCCCCCCCCCCCCHHHHCCCC YHEFIGELCTILTAALQVLRPGGYLVIFAKDLQPTPEHHNMLHADLVIALRQVPGLEYRG HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC YRIWHDQSQRLYPFGYPYAFVANQMHQFILIFRWRGDGKG EEEEECCCCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA