| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524210
Identifier: 222524210
GI number: 222524210
Start: 1176385
End: 1176849
Strand: Reverse
Name: 222524210
Synonym: Chy400_0931
Alternate gene names: NA
Gene position: 1176849-1176385 (Counterclockwise)
Preceding gene: 222524216
Following gene: 222524209
Centisome position: 22.34
GC content: 57.63
Gene sequence:
>465_bases ATGACGAACAAAACAAAAACGACCGTTCCGGTCGAACAAGAGATTCGCTACTGGATGCGCACACCGGCTATCACCATCAA CCTGGCTGCGCCACTCAGCGAAGCGCTGGCCCTGATGCGCGAGCACGACATCCGGCGGCTACCGGTGGTGGTTGATACGG GTGAATTGCGCGGCATTATCACACAGGGTGACATTCGCGGCGCCGATATTATGCGGGTCGCCGGTCTCGATCCGGTCGAT ATTGCCCAGGCCCTGCGTAATGTAAAGGTCTACGAGGTCATGACCGAAGACCCAATTGCGGTTACGCCGGAGACCAGTCT GCGCGAGGCGGCGTTGTTGATGATCGAGAACAAGATTGGCGGCTTACCGGTGATTGACGAAAACAAGCGTGTGATCGGCA TCATCACCGAGAGCGATCTGTTCGAGGCGCTGGTGCAGCAGCTTGAGACGCATCCGCGGTTCTGA
Upstream 100 bases:
>100_bases TCATCACTACGCAAGGGAAAGAAATCCTCTTCAAAAGAGCCGCTCTTGTGCTAAGATCACAACTACAGACATCCAGTTTA TCAGCGCAAGGAGGCGCGCC
Downstream 100 bases:
>100_bases GGCTTGAGATATGGGGAGAGAAAATAGGAAATAGGAGAGAGGAAAAAGGAGAAAAGAGTGGTGTGCTGAGTGGGTGCGGG GGGTGTTGCGCGTTGCATGC
Product: CBS domain-containing membrane protein
Products: NA
Alternate protein names: CBS Domain Containing Membrane Protein; Signal Transduction Protein; CBS Domain Containing Protein; Signal Transduction Protein With CBS Domains; Acetoin Utilization Protein AcuB; Signal Transduction Protein With Cbs Domains; CBS Domain Protein/ACT Domain Protein; AcuB Family Protein; Acetoin Utilization Protein; CBS Domain Protein; Acetoin Utilization AcuB Protein; Signal-Transduction Protein; Acetoin Utilization Protein Acetoin Dehydrogenase; Signal-Transduction Protein With CBS Domains; CBS Domain Pair-Containing Protein; Chloride Channel Protein; Cbs Domain Containing Protein; Related Inosine Monophosphate Dehydrogenase; XRE Family Transcriptional Regulator; Acetoin Dehydrogenase; Inosine-5-Monophosphate Dehydrogenase Related Protein III; Acetoin Dehydrogenase AcuB; Acetoin Utilization Protein Truncated; Cbs Domain Containing Membrane Protein; Acetoin Utilization /CBS Domain-Containing Protein
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTNKTKTTVPVEQEIRYWMRTPAITINLAAPLSEALALMREHDIRRLPVVVDTGELRGIITQGDIRGADIMRVAGLDPVD IAQALRNVKVYEVMTEDPIAVTPETSLREAALLMIENKIGGLPVIDENKRVIGIITESDLFEALVQQLETHPRF
Sequences:
>Translated_154_residues MTNKTKTTVPVEQEIRYWMRTPAITINLAAPLSEALALMREHDIRRLPVVVDTGELRGIITQGDIRGADIMRVAGLDPVD IAQALRNVKVYEVMTEDPIAVTPETSLREAALLMIENKIGGLPVIDENKRVIGIITESDLFEALVQQLETHPRF >Mature_153_residues TNKTKTTVPVEQEIRYWMRTPAITINLAAPLSEALALMREHDIRRLPVVVDTGELRGIITQGDIRGADIMRVAGLDPVDI AQALRNVKVYEVMTEDPIAVTPETSLREAALLMIENKIGGLPVIDENKRVIGIITESDLFEALVQQLETHPRF
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17182; Mature: 17051
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNKTKTTVPVEQEIRYWMRTPAITINLAAPLSEALALMREHDIRRLPVVVDTGELRGII CCCCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEECCCEEEEE TQGDIRGADIMRVAGLDPVDIAQALRNVKVYEVMTEDPIAVTPETSLREAALLMIENKIG EECCCCCCCEEEECCCCHHHHHHHHHCCEEEEEECCCCEEECCCCCHHHHHHEEEECCCC GLPVIDENKRVIGIITESDLFEALVQQLETHPRF CCCEEECCCEEEEEEECHHHHHHHHHHHHHCCCC >Mature Secondary Structure TNKTKTTVPVEQEIRYWMRTPAITINLAAPLSEALALMREHDIRRLPVVVDTGELRGII CCCCCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEECCCEEEEE TQGDIRGADIMRVAGLDPVDIAQALRNVKVYEVMTEDPIAVTPETSLREAALLMIENKIG EECCCCCCCEEEECCCCHHHHHHHHHCCEEEEEECCCCEEECCCCCHHHHHHEEEECCCC GLPVIDENKRVIGIITESDLFEALVQQLETHPRF CCCEEECCCEEEEEEECHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA