| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is frzE [H]
Identifier: 222524203
GI number: 222524203
Start: 1166501
End: 1168762
Strand: Reverse
Name: frzE [H]
Synonym: Chy400_0924
Alternate gene names: 222524203
Gene position: 1168762-1166501 (Counterclockwise)
Preceding gene: 222524204
Following gene: 222524202
Centisome position: 22.18
GC content: 54.95
Gene sequence:
>2262_bases ATGCTCTCTGATGACGATATTCAGGCGCAGGTGCTGGCCGTCTTTCGCGCAGAACAGGCCGAGCATCGTCAAACCATCAT CGATATTCTGCTCGATCTGGAGCGGACACCAGATCACCCTCGCCGTCGTGATCTGGTTGATCACCTGTTTCGAGCCGCTC ACAGTCTGAAAGGTGGGGCACGCGCTGCTGGTGTCAAAAGCGTTGAGCAGATCGCTCATCACATTGAGCATATCTTTGCG GCCCTGCGCCAGAACCAGCTTACGCTCACCGCCGATATCTGTGATGTGATTTATCAGGCGCTTGATGTTATTGGCGCGTT GATGGAACAGGCGGTGCCGGGGCAAATAGACGATCAGGACGCATTGGATGACTTACTCGCTCATCTGATGGCAATCGGCC AGAACATGCGCGACGGCGACGCAACCAGTCTATCACCATCTTCATTTACGCCAGAAGATCACACCCGGCAGTCGGCGCCA TCGCTGGCCGCCGAAACAAGTGTCCGGGTTGATGTGGCTGTTCTCGACAATTTGATGAGCGAAATGGGGGAGTTGTTAAC AAGTACGCTGCGTACCCGTCAGCTTGCCCGTGATCTGCAAGAACTGGCCCGGCTGCCTGAGCGCTGGCAGCGCGCCTGGC GGCGAACTGCACCGTTCCTGCGCCACGGATCGTCGTTGCATGCCAATGGTCAGCTCATTCCGCAAAGTCAACAACAGATT GTCATCGACATGCTCAGGCAGGCAAATGACGTTATCAGTGCACTCGGTACAAGATTGTCTCAGCTTGCCTATCAGGCCCG CGATAATCACGATCTCCTGGCCGATATTAGCACGCGGATGCAGGCCCAGGTGCAGCGTACTCGTATGTCGCCCCTGAGTA GAATTGTCGGTTCATTACGCCTGCACGTGCGCGATTTGGCTCGTAGCGCCGGCAAAGAAGTGACATTTGTCGTCGAAGAC TCTGGGGCAGAAGCTGATCGCCAGGTCCTTGATCAGGTGTATGAGATTTGTCTGCATTTGCTCCGCAATGCAGTGGATCA TGGGATTGAACCCCCTGAGGTGCGTAAGGCCAGGGGGAAACCACCTACCGGTCTGATCCGCCTGACGGCGAACGCCAGCA GTGACCGCCTCAATCTTGTGATTAGTGACGATGGCGCCGGGATTGATCGAGAAGATATCAAACGGCATGCGCTTCAGCTC GGTCTGTTGAGTCAACATGACAGTGAGCATGCTGACGATGCGATGGTTCTCGATCTCATCTTTACTCCAGGGTTCTCGAC CAAATCGCATGTCAGTGAGTTGTCGGGACGGGGGGTTGGCCTTGATGTCGTGCGAACGACTGTCGAGCGGATGGGAGGGA GCGTGACGGTAATGAGTGTTCCCGGTCAGGGCACAACGTTCACTCTGGCTCTCCCGCTCACCCTCATGCGCACGCGCGGT CTGCTGATGTATGTGAATAATCAAGTCTTTGCCTTACCCGTTGATAGTCTACGCCGCGTGGTGCAGGTTAATCGTACCCA ACTTCATACCCTGGAAGGTCGTCCGGTTGTGCTTGTTGATGGACGGCCATTACAACTGATTTCCATGGCCCGGCTCATCG GTTTTTCATCAGAAACAGTGATCGATTTCCCTGGTCCCAAGCCGGCATTATTGATCGGGAGTAATGAACGACAAATTGCC TGTATTGTTGATTCTATCGGCGAAGAGATCGATCTCGTCGTTCACCGGCTGCCACCACCATTACAACGGGTTCGCTTTGT CAGTGGCGCGGCAATTCTCGCTGATGGCAGCGTAGCCCCGATCCTTGATGCGGTCGATCTGTTACGAGCAGCCCTGACGG TTGAGCATGCGGTGATGTTACCGACTGCCAATCCTACCCCTGCTCATTCGCCGACGATCCTCGTGGTTGATGACTCAATC ACGACCCGTACATTGGAAAAGAACATCCTGGAAGCCGCCGGTTATCGGGTTGTGCTGGCAACTGATGGTCAGGAGGCACT GGAACGATTGCACAACTTGCAAAATCAGGGTGGATGTCAGCTTGTCCTGAGTGATATTGATATGCCACGTTTGAATGGCT TCGATCTGACTCGTCAGATTCGCACCGATCCTGCCTTCCGTCACTTGCCGGTGGTACTCGTTACCTCGCTCGATAGTCCA GCCGACCGCGAACGTGGCCTGGCTGCGGGTGCCGATGCCTATATCGTTAAACGTGCCTTTGATCAGCAAGCACTGCTGGA AACTATCGCACGGTTGCTATGA
Upstream 100 bases:
>100_bases TTCACTATGGGTGACCGGGTGGAAGTATCTGCGTCAGCGAGCGCGGGACTGTTTTCACTACCGGCTTGCGACCTTACGCT CATCTAACTAAGAGGTTTAT
Downstream 100 bases:
>100_bases GATAGTACTATGAAACACATCCAGACCCAAAAAATCACGGTCAGCAATGATGCTGATCTGATACTGCTTCGCCAGATACT GCGCCAGAGTACGCGAACGA
Product: CheA signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 753; Mature: 753
Protein sequence:
>753_residues MLSDDDIQAQVLAVFRAEQAEHRQTIIDILLDLERTPDHPRRRDLVDHLFRAAHSLKGGARAAGVKSVEQIAHHIEHIFA ALRQNQLTLTADICDVIYQALDVIGALMEQAVPGQIDDQDALDDLLAHLMAIGQNMRDGDATSLSPSSFTPEDHTRQSAP SLAAETSVRVDVAVLDNLMSEMGELLTSTLRTRQLARDLQELARLPERWQRAWRRTAPFLRHGSSLHANGQLIPQSQQQI VIDMLRQANDVISALGTRLSQLAYQARDNHDLLADISTRMQAQVQRTRMSPLSRIVGSLRLHVRDLARSAGKEVTFVVED SGAEADRQVLDQVYEICLHLLRNAVDHGIEPPEVRKARGKPPTGLIRLTANASSDRLNLVISDDGAGIDREDIKRHALQL GLLSQHDSEHADDAMVLDLIFTPGFSTKSHVSELSGRGVGLDVVRTTVERMGGSVTVMSVPGQGTTFTLALPLTLMRTRG LLMYVNNQVFALPVDSLRRVVQVNRTQLHTLEGRPVVLVDGRPLQLISMARLIGFSSETVIDFPGPKPALLIGSNERQIA CIVDSIGEEIDLVVHRLPPPLQRVRFVSGAAILADGSVAPILDAVDLLRAALTVEHAVMLPTANPTPAHSPTILVVDDSI TTRTLEKNILEAAGYRVVLATDGQEALERLHNLQNQGGCQLVLSDIDMPRLNGFDLTRQIRTDPAFRHLPVVLVTSLDSP ADRERGLAAGADAYIVKRAFDQQALLETIARLL
Sequences:
>Translated_753_residues MLSDDDIQAQVLAVFRAEQAEHRQTIIDILLDLERTPDHPRRRDLVDHLFRAAHSLKGGARAAGVKSVEQIAHHIEHIFA ALRQNQLTLTADICDVIYQALDVIGALMEQAVPGQIDDQDALDDLLAHLMAIGQNMRDGDATSLSPSSFTPEDHTRQSAP SLAAETSVRVDVAVLDNLMSEMGELLTSTLRTRQLARDLQELARLPERWQRAWRRTAPFLRHGSSLHANGQLIPQSQQQI VIDMLRQANDVISALGTRLSQLAYQARDNHDLLADISTRMQAQVQRTRMSPLSRIVGSLRLHVRDLARSAGKEVTFVVED SGAEADRQVLDQVYEICLHLLRNAVDHGIEPPEVRKARGKPPTGLIRLTANASSDRLNLVISDDGAGIDREDIKRHALQL GLLSQHDSEHADDAMVLDLIFTPGFSTKSHVSELSGRGVGLDVVRTTVERMGGSVTVMSVPGQGTTFTLALPLTLMRTRG LLMYVNNQVFALPVDSLRRVVQVNRTQLHTLEGRPVVLVDGRPLQLISMARLIGFSSETVIDFPGPKPALLIGSNERQIA CIVDSIGEEIDLVVHRLPPPLQRVRFVSGAAILADGSVAPILDAVDLLRAALTVEHAVMLPTANPTPAHSPTILVVDDSI TTRTLEKNILEAAGYRVVLATDGQEALERLHNLQNQGGCQLVLSDIDMPRLNGFDLTRQIRTDPAFRHLPVVLVTSLDSP ADRERGLAAGADAYIVKRAFDQQALLETIARLL >Mature_753_residues MLSDDDIQAQVLAVFRAEQAEHRQTIIDILLDLERTPDHPRRRDLVDHLFRAAHSLKGGARAAGVKSVEQIAHHIEHIFA ALRQNQLTLTADICDVIYQALDVIGALMEQAVPGQIDDQDALDDLLAHLMAIGQNMRDGDATSLSPSSFTPEDHTRQSAP SLAAETSVRVDVAVLDNLMSEMGELLTSTLRTRQLARDLQELARLPERWQRAWRRTAPFLRHGSSLHANGQLIPQSQQQI VIDMLRQANDVISALGTRLSQLAYQARDNHDLLADISTRMQAQVQRTRMSPLSRIVGSLRLHVRDLARSAGKEVTFVVED SGAEADRQVLDQVYEICLHLLRNAVDHGIEPPEVRKARGKPPTGLIRLTANASSDRLNLVISDDGAGIDREDIKRHALQL GLLSQHDSEHADDAMVLDLIFTPGFSTKSHVSELSGRGVGLDVVRTTVERMGGSVTVMSVPGQGTTFTLALPLTLMRTRG LLMYVNNQVFALPVDSLRRVVQVNRTQLHTLEGRPVVLVDGRPLQLISMARLIGFSSETVIDFPGPKPALLIGSNERQIA CIVDSIGEEIDLVVHRLPPPLQRVRFVSGAAILADGSVAPILDAVDLLRAALTVEHAVMLPTANPTPAHSPTILVVDDSI TTRTLEKNILEAAGYRVVLATDGQEALERLHNLQNQGGCQLVLSDIDMPRLNGFDLTRQIRTDPAFRHLPVVLVTSLDSP ADRERGLAAGADAYIVKRAFDQQALLETIARLL
Specific function: FrzE is involved in a sensory transduction pathway that controls the frequency at which cells reverse their gliding direction. FrzE seems to be capable of autophosphorylating itself on an histidine residue and then to transfer that group to an aspartate r
COG id: COG0643
COG function: function code NT; Chemotaxis protein histidine kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788197, Length=644, Percent_Identity=28.5714285714286, Blast_Score=207, Evalue=3e-54, Organism=Escherichia coli, GI1790863, Length=109, Percent_Identity=37.6146788990826, Blast_Score=70, Evalue=6e-13, Organism=Escherichia coli, GI1788191, Length=121, Percent_Identity=36.3636363636364, Blast_Score=67, Evalue=5e-12, Organism=Escherichia coli, GI1790436, Length=147, Percent_Identity=31.2925170068027, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002545 - InterPro: IPR011006 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR005467 - InterPro: IPR001789 [H]
Pfam domain/function: PF01584 CheW; PF02518 HATPase_c; PF01627 Hpt; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 82626; Mature: 82626
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS50851 CHEW ; PS50894 HPT ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSDDDIQAQVLAVFRAEQAEHRQTIIDILLDLERTPDHPRRRDLVDHLFRAAHSLKGGA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC RAAGVKSVEQIAHHIEHIFAALRQNQLTLTADICDVIYQALDVIGALMEQAVPGQIDDQD HHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH ALDDLLAHLMAIGQNMRDGDATSLSPSSFTPEDHTRQSAPSLAAETSVRVDVAVLDNLMS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHCCCEEHHHHHHHHHH EMGELLTSTLRTRQLARDLQELARLPERWQRAWRRTAPFLRHGSSLHANGQLIPQSQQQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCHHHHH VIDMLRQANDVISALGTRLSQLAYQARDNHDLLADISTRMQAQVQRTRMSPLSRIVGSLR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHVRDLARSAGKEVTFVVEDSGAEADRQVLDQVYEICLHLLRNAVDHGIEPPEVRKARGK HHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC PPTGLIRLTANASSDRLNLVISDDGAGIDREDIKRHALQLGLLSQHDSEHADDAMVLDLI CCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE FTPGFSTKSHVSELSGRGVGLDVVRTTVERMGGSVTVMSVPGQGTTFTLALPLTLMRTRG ECCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEHHHHHHHHCC LLMYVNNQVFALPVDSLRRVVQVNRTQLHTLEGRPVVLVDGRPLQLISMARLIGFSSETV EEEEECCEEEEECHHHHHHHHHHCHHHEEEECCCEEEEECCCCHHHHHHHHHHCCCCCCE IDFPGPKPALLIGSNERQIACIVDSIGEEIDLVVHRLPPPLQRVRFVSGAAILADGSVAP EECCCCCCEEEECCCCCEEEEEHHHHCHHHHHHHHCCCCHHHHHHHHCCCEEEECCCHHH ILDAVDLLRAALTVEHAVMLPTANPTPAHSPTILVVDDSITTRTLEKNILEAAGYRVVLA HHHHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEE TDGQEALERLHNLQNQGGCQLVLSDIDMPRLNGFDLTRQIRTDPAFRHLPVVLVTSLDSP CCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHCCCCHHHCCEEEEECCCCC ADRERGLAAGADAYIVKRAFDQQALLETIARLL CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MLSDDDIQAQVLAVFRAEQAEHRQTIIDILLDLERTPDHPRRRDLVDHLFRAAHSLKGGA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC RAAGVKSVEQIAHHIEHIFAALRQNQLTLTADICDVIYQALDVIGALMEQAVPGQIDDQD HHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH ALDDLLAHLMAIGQNMRDGDATSLSPSSFTPEDHTRQSAPSLAAETSVRVDVAVLDNLMS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHCCCEEHHHHHHHHHH EMGELLTSTLRTRQLARDLQELARLPERWQRAWRRTAPFLRHGSSLHANGQLIPQSQQQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCHHHHH VIDMLRQANDVISALGTRLSQLAYQARDNHDLLADISTRMQAQVQRTRMSPLSRIVGSLR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHVRDLARSAGKEVTFVVEDSGAEADRQVLDQVYEICLHLLRNAVDHGIEPPEVRKARGK HHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC PPTGLIRLTANASSDRLNLVISDDGAGIDREDIKRHALQLGLLSQHDSEHADDAMVLDLI CCCCEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE FTPGFSTKSHVSELSGRGVGLDVVRTTVERMGGSVTVMSVPGQGTTFTLALPLTLMRTRG ECCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEHHHHHHHHCC LLMYVNNQVFALPVDSLRRVVQVNRTQLHTLEGRPVVLVDGRPLQLISMARLIGFSSETV EEEEECCEEEEECHHHHHHHHHHCHHHEEEECCCEEEEECCCCHHHHHHHHHHCCCCCCE IDFPGPKPALLIGSNERQIACIVDSIGEEIDLVVHRLPPPLQRVRFVSGAAILADGSVAP EECCCCCCEEEECCCCCEEEEEHHHHCHHHHHHHHCCCCHHHHHHHHCCCEEEECCCHHH ILDAVDLLRAALTVEHAVMLPTANPTPAHSPTILVVDDSITTRTLEKNILEAAGYRVVLA HHHHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEE TDGQEALERLHNLQNQGGCQLVLSDIDMPRLNGFDLTRQIRTDPAFRHLPVVLVTSLDSP CCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHCCCCHHHCCEEEEECCCCC ADRERGLAAGADAYIVKRAFDQQALLETIARLL CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2165608; 2123853 [H]