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The map label for this gene is yrrC [H]

Identifier: 222524171

GI number: 222524171

Start: 1121638

End: 1123815

Strand: Reverse

Name: yrrC [H]

Synonym: Chy400_0890

Alternate gene names: 222524171

Gene position: 1123815-1121638 (Counterclockwise)

Preceding gene: 222524172

Following gene: 222524170

Centisome position: 21.33

GC content: 60.7

Gene sequence:

>2178_bases
ATGCAGCAGCTTGACGGCACCCTCGAACGGATCACCTTTCAGAGTGAGAGCGATGGCTACACCGTGGCCCAACTTCGTCC
GCTTGGCAAACGTCACACGGTGACAATTGTCGGCAACCTGCCGGGCGTACAGCCCGGTGAACAACTCAGTCTCGAAGGTG
AATGGCGCGATCACCCGACCCATGGCCGGCAGTTTCACGTCCAGCGCTACCGGAGCCGTCTGCCAGCCACGGTTGATGGT
ATTCGCCGCTATCTGGGCAGCGGCTTGATCAAGGGTGTCGGGCCGGTCCTCGCCAAACGGATCACTGAAACCTTTGGCAA
GTACACCTTAGAGGTGCTGGATCGCGAACCGGAGCGTCTGAGCGAAGTCCCCGGTCTGGGGCGGAAGAAGGCCGTGCTGA
TCGCCGAGGCATGGCGGGCGCAGCAGCGTATCAAAGACCTGATGTTACTCCTGCAGGACCTGGGTCTGCCTACCGGGGTT
GCCGTTCGTATCTACCGGCATTACGGCGATGACGCTTTGCGAGTGGTGCAACAGGAACCGTACCGTCTGGCCGATGAAGT
TGATGGGGTTGGGTTTCGTACCGCTGACGCCATTGCCGCCGGTCTCGGCATTGCCCGCGATGATCCGCAGCGGATCGCTG
CCGGGCTGCGTTATACGCTGGCACAGGCTTCCGACGAAGGGCATTGTTACCTGCCCGCCGGTGAACTGACCAGACGCGCT
GCCAGCCTGCTTTCAGTGACGACTGCTGCGGTGACGGATGTGTTTACGCAGATGGTGGCAACCAATCAGCTTTGGCGCGA
TCCAATTGTGGCCGATCCCGACCCTGATCGCTACCCGATCTACCTGCCGCCGCTGGCATTTGCCGAGATTGGGGTTGCCA
ACGCCATTCGCCGCCTGATCCAGCAACGCTCGTCCCTGGCTGCACGCTATGCACCTAGCCGCTGGAACCTGGTGTTTGCC
CATCTTGCCGAACGGCGTGGGATCAATCTCAGCGATCAACAGCGCCGTGCGGTACAGACGGCGCTGACCACACCGGTCAT
GTTGCTCACCGGTGGGCCGGGGACGGGCAAAACCACCAGCCTGCGTGCGCTGGTCATGCTTTTACAGGCCAGAGGCTATC
GTCCGCTGCTGGCGGCACCGACCGGACGGGCAGCCCGGCGCTTGAGCGAGGCGACCGGCCTGGAAGCCCGCACTATTCAC
CGTCTGCTTGAATATGGCCCTGATGGAACATTTCGCCGCAACGCCGAATATCCCCTCGACTGTGACCTCCTGGTGATCGA
TGAAGCCAGTATGCTCGATATTGTGCTGGCCAATCAGCTCCTGAAGGCGATCCCAGCCGGTGCGCATCTGGTCATCGTGG
GGGATGCCGATCAATTGCCGAGTGTTGGCCCTGGCCGTGTGCTTGGTGATGTGATCGAGAGTGGGGTTGTGCCGCGGGTG
CATCTCGATGCGATCTTTCGCCAGGCTGCCGGCAGTGGGATTGCCGCCAATGCGCGACGGATCAACGAAGGCCACCTTCC
CGAATGGGGTGCGCACGATGATTTCTACTTCTTTGCAGCTGCAACACCCGAACGGTGTGCGGCGCTGACCGTAGAGCTGG
TGGTAGAACGCATCCCGCGTCGGTTTGGATTTGATCCTCGTCGTGATATTCAGGTGCTCAGTCCAACCCACAAAGGGGTG
GCCGGAGTTGCGGCCCTCAATGCAGCATTGCAGGCAGCGTTGAACCCACCGCGCCCCGGTGTCGCCGAATACCACAGTGG
CGCTACCATCTTTCGGGTAGGGGATCGCGTCATCCAGCAGCGGAACGATTATGATCGGGATGTCTACAACGGTGATGTTG
GTGAGATTGTCGCGGTTGATCCCACCGGGCCAACAGTTATGGTGCGCTTTGAGGATGGTCGAACCATCCGTTACAACGGT
CTCGATCTCGATGATCTCACCCTGGCTTACGCCCTCAGCGTCCACAAAAGCCAGGGAAGTGAATACCCGGTTGTCGTCCT
TCCCCTCCTGCTGTCCCATCAGCCACTGCTGCAACGTAACCTGATCTACACCGCAGTGACCCGCGCTCGCCAGCTTGTCG
TGATCGTTGGTGATCGGCGAGCGGTTGAGGTGGCGATTGCCGCAGCCAATGTTGAACGCCGCTACACCGGCCTGAGCATT
CGGCTCGGTAGAACCTGA

Upstream 100 bases:

>100_bases
GCTTCGCTATAATTGTGAATGCCAGACATCATCAACACCGGACGTGCGGGCAGAGAGTCGTTTGCCGACCTGAACCGCAC
GCCAAACAAGCGATACATTT

Downstream 100 bases:

>100_bases
TCGCCCTGGCCGTGACGCAAAACACCAGTAAATCGTCATCTTTTTTGATTGACCGATCAGTCAATATGTGCTATACTCCT
GACAATTCGATCAAGCGAGA

Product: helicase, RecD/TraA family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 725; Mature: 725

Protein sequence:

>725_residues
MQQLDGTLERITFQSESDGYTVAQLRPLGKRHTVTIVGNLPGVQPGEQLSLEGEWRDHPTHGRQFHVQRYRSRLPATVDG
IRRYLGSGLIKGVGPVLAKRITETFGKYTLEVLDREPERLSEVPGLGRKKAVLIAEAWRAQQRIKDLMLLLQDLGLPTGV
AVRIYRHYGDDALRVVQQEPYRLADEVDGVGFRTADAIAAGLGIARDDPQRIAAGLRYTLAQASDEGHCYLPAGELTRRA
ASLLSVTTAAVTDVFTQMVATNQLWRDPIVADPDPDRYPIYLPPLAFAEIGVANAIRRLIQQRSSLAARYAPSRWNLVFA
HLAERRGINLSDQQRRAVQTALTTPVMLLTGGPGTGKTTSLRALVMLLQARGYRPLLAAPTGRAARRLSEATGLEARTIH
RLLEYGPDGTFRRNAEYPLDCDLLVIDEASMLDIVLANQLLKAIPAGAHLVIVGDADQLPSVGPGRVLGDVIESGVVPRV
HLDAIFRQAAGSGIAANARRINEGHLPEWGAHDDFYFFAAATPERCAALTVELVVERIPRRFGFDPRRDIQVLSPTHKGV
AGVAALNAALQAALNPPRPGVAEYHSGATIFRVGDRVIQQRNDYDRDVYNGDVGEIVAVDPTGPTVMVRFEDGRTIRYNG
LDLDDLTLAYALSVHKSQGSEYPVVVLPLLLSHQPLLQRNLIYTAVTRARQLVVIVGDRRAVEVAIAAANVERRYTGLSI
RLGRT

Sequences:

>Translated_725_residues
MQQLDGTLERITFQSESDGYTVAQLRPLGKRHTVTIVGNLPGVQPGEQLSLEGEWRDHPTHGRQFHVQRYRSRLPATVDG
IRRYLGSGLIKGVGPVLAKRITETFGKYTLEVLDREPERLSEVPGLGRKKAVLIAEAWRAQQRIKDLMLLLQDLGLPTGV
AVRIYRHYGDDALRVVQQEPYRLADEVDGVGFRTADAIAAGLGIARDDPQRIAAGLRYTLAQASDEGHCYLPAGELTRRA
ASLLSVTTAAVTDVFTQMVATNQLWRDPIVADPDPDRYPIYLPPLAFAEIGVANAIRRLIQQRSSLAARYAPSRWNLVFA
HLAERRGINLSDQQRRAVQTALTTPVMLLTGGPGTGKTTSLRALVMLLQARGYRPLLAAPTGRAARRLSEATGLEARTIH
RLLEYGPDGTFRRNAEYPLDCDLLVIDEASMLDIVLANQLLKAIPAGAHLVIVGDADQLPSVGPGRVLGDVIESGVVPRV
HLDAIFRQAAGSGIAANARRINEGHLPEWGAHDDFYFFAAATPERCAALTVELVVERIPRRFGFDPRRDIQVLSPTHKGV
AGVAALNAALQAALNPPRPGVAEYHSGATIFRVGDRVIQQRNDYDRDVYNGDVGEIVAVDPTGPTVMVRFEDGRTIRYNG
LDLDDLTLAYALSVHKSQGSEYPVVVLPLLLSHQPLLQRNLIYTAVTRARQLVVIVGDRRAVEVAIAAANVERRYTGLSI
RLGRT
>Mature_725_residues
MQQLDGTLERITFQSESDGYTVAQLRPLGKRHTVTIVGNLPGVQPGEQLSLEGEWRDHPTHGRQFHVQRYRSRLPATVDG
IRRYLGSGLIKGVGPVLAKRITETFGKYTLEVLDREPERLSEVPGLGRKKAVLIAEAWRAQQRIKDLMLLLQDLGLPTGV
AVRIYRHYGDDALRVVQQEPYRLADEVDGVGFRTADAIAAGLGIARDDPQRIAAGLRYTLAQASDEGHCYLPAGELTRRA
ASLLSVTTAAVTDVFTQMVATNQLWRDPIVADPDPDRYPIYLPPLAFAEIGVANAIRRLIQQRSSLAARYAPSRWNLVFA
HLAERRGINLSDQQRRAVQTALTTPVMLLTGGPGTGKTTSLRALVMLLQARGYRPLLAAPTGRAARRLSEATGLEARTIH
RLLEYGPDGTFRRNAEYPLDCDLLVIDEASMLDIVLANQLLKAIPAGAHLVIVGDADQLPSVGPGRVLGDVIESGVVPRV
HLDAIFRQAAGSGIAANARRINEGHLPEWGAHDDFYFFAAATPERCAALTVELVVERIPRRFGFDPRRDIQVLSPTHKGV
AGVAALNAALQAALNPPRPGVAEYHSGATIFRVGDRVIQQRNDYDRDVYNGDVGEIVAVDPTGPTVMVRFEDGRTIRYNG
LDLDDLTLAYALSVHKSQGSEYPVVVLPLLLSHQPLLQRNLIYTAVTRARQLVVIVGDRRAVEVAIAAANVERRYTGLSI
RLGRT

Specific function: Exhibits Several Catalytic Activities, Including ATP-Dependent Exonuclease, ATP-Stimulated Endonuclease, ATP-Dependent Unwinding And DNA-Dependent ATPase Activities. Strand Cleavage Occurs 5' To 3' During The Unwinding Of Duplex DNA At Chi Sequences, Whi

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789182, Length=424, Percent_Identity=29.7169811320755, Blast_Score=118, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR006345 [H]

Pfam domain/function: NA

EC number: 3.1.11.5

Molecular weight: Translated: 79482; Mature: 79482

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQLDGTLERITFQSESDGYTVAQLRPLGKRHTVTIVGNLPGVQPGEQLSLEGEWRDHPT
CCCCCCCHHHEEEECCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCC
HGRQFHVQRYRSRLPATVDGIRRYLGSGLIKGVGPVLAKRITETFGKYTLEVLDREPERL
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
SEVPGLGRKKAVLIAEAWRAQQRIKDLMLLLQDLGLPTGVAVRIYRHYGDDALRVVQQEP
HHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCHHHHHHHCCC
YRLADEVDGVGFRTADAIAAGLGIARDDPQRIAAGLRYTLAQASDEGHCYLPAGELTRRA
HHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHH
ASLLSVTTAAVTDVFTQMVATNQLWRDPIVADPDPDRYPIYLPPLAFAEIGVANAIRRLI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHH
QQRSSLAARYAPSRWNLVFAHLAERRGINLSDQQRRAVQTALTTPVMLLTGGPGTGKTTS
HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHH
LRALVMLLQARGYRPLLAAPTGRAARRLSEATGLEARTIHRLLEYGPDGTFRRNAEYPLD
HHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
CDLLVIDEASMLDIVLANQLLKAIPAGAHLVIVGDADQLPSVGPGRVLGDVIESGVVPRV
CCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECHHCCCCCCCHHHHHHHHHCCCCCCH
HLDAIFRQAAGSGIAANARRINEGHLPEWGAHDDFYFFAAATPERCAALTVELVVERIPR
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
RFGFDPRRDIQVLSPTHKGVAGVAALNAALQAALNPPRPGVAEYHSGATIFRVGDRVIQQ
HHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEHHHHHHHH
RNDYDRDVYNGDVGEIVAVDPTGPTVMVRFEDGRTIRYNGLDLDDLTLAYALSVHKSQGS
CCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCC
EYPVVVLPLLLSHQPLLQRNLIYTAVTRARQLVVIVGDRRAVEVAIAAANVERRYTGLSI
CCCEEHEEHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEECCCHHHCCCEEE
RLGRT
EECCC
>Mature Secondary Structure
MQQLDGTLERITFQSESDGYTVAQLRPLGKRHTVTIVGNLPGVQPGEQLSLEGEWRDHPT
CCCCCCCHHHEEEECCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCC
HGRQFHVQRYRSRLPATVDGIRRYLGSGLIKGVGPVLAKRITETFGKYTLEVLDREPERL
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
SEVPGLGRKKAVLIAEAWRAQQRIKDLMLLLQDLGLPTGVAVRIYRHYGDDALRVVQQEP
HHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCHHHHHHHCCC
YRLADEVDGVGFRTADAIAAGLGIARDDPQRIAAGLRYTLAQASDEGHCYLPAGELTRRA
HHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHH
ASLLSVTTAAVTDVFTQMVATNQLWRDPIVADPDPDRYPIYLPPLAFAEIGVANAIRRLI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHH
QQRSSLAARYAPSRWNLVFAHLAERRGINLSDQQRRAVQTALTTPVMLLTGGPGTGKTTS
HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCHHH
LRALVMLLQARGYRPLLAAPTGRAARRLSEATGLEARTIHRLLEYGPDGTFRRNAEYPLD
HHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
CDLLVIDEASMLDIVLANQLLKAIPAGAHLVIVGDADQLPSVGPGRVLGDVIESGVVPRV
CCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECHHCCCCCCCHHHHHHHHHCCCCCCH
HLDAIFRQAAGSGIAANARRINEGHLPEWGAHDDFYFFAAATPERCAALTVELVVERIPR
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
RFGFDPRRDIQVLSPTHKGVAGVAALNAALQAALNPPRPGVAEYHSGATIFRVGDRVIQQ
HHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEHHHHHHHH
RNDYDRDVYNGDVGEIVAVDPTGPTVMVRFEDGRTIRYNGLDLDDLTLAYALSVHKSQGS
CCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHCCCC
EYPVVVLPLLLSHQPLLQRNLIYTAVTRARQLVVIVGDRRAVEVAIAAANVERRYTGLSI
CCCEEHEEHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEECCCHHHCCCEEE
RLGRT
EECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: DNA-dependent ATPase activity; Phosphoric ester hydrolysis [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]