| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is murC
Identifier: 222524101
GI number: 222524101
Start: 1028882
End: 1030267
Strand: Reverse
Name: murC
Synonym: Chy400_0817
Alternate gene names: 222524101
Gene position: 1030267-1028882 (Counterclockwise)
Preceding gene: 222524102
Following gene: 222524100
Centisome position: 19.55
GC content: 61.69
Gene sequence:
>1386_bases ATGAGCGCGATTGCCCATCTGCTGCTCGACCAGGGTCATACAGTGAGCGGTTCGGACTTGACCGCAAACCACGCTACGGC TGCACTCCAGGCCCGGGGTGTACAGGTCTGGCGTGGTCATGATCCGGCGTATGTGCAGGGTGCCGATGTTGTTCTGGCGA CAGCAGCAATTCGTGGCACCCACCCTGAATTAGAGGCGGCTGCGGCGGCAGGGATCCCTCGCCTGAGTCGGGCCGACTTG TGGCGTCTGTGGTCAGAACAGCGCCCGGTGATTGCTATCGCCGGGACCCATGGCAAGACCACAACCACCGCATTGACAGC GCTGGCGTTGCGTGGTGCCGGGATCAGGTGTGGTTTTCTGATCGGTGCTGATGTGCCGGCGCTGGGTGGGAGCGCACAAT GGGGCGATCCAGAAGCACCACTGGTGATCGAAGCCGATGAATACGACCGGGTCTTTCTGGCGCTGACACCGGCGCTGGCG ATTATTACCAATGTCGAATGGGATCATCCCGATGTCTACCCCACGCCATCTGAGTACACGGCAGCCTTTGCCGCCTTTTC CCGCCAGGTGCGTGATCCACGCCGGTTACTGGTCTGCGCCGATGATCCCGGTGCCCTCGCTCTTGCCGGGCAGAGTGAAG CCCGCCTGTACGGGATCGATGAGCACATTGCCACCGATCCGGTCTCTTGTCGACTGGCCCCACTCGACTGGACGGCAAGT GGGGTGACAGGAACTGCTACCGGTCAACAGTTTGATCTCTGGTACTACGACCGGCGTTCGTTCGGACGACGGCTGGCCGC GACAGTCACGCTGGCTATTCCTGGTGAACATAATGTACGAAATGCAACCGCAGCACTGGCAGCGGCTGCGCTATGGGGCG CCGATCTGCGTACAGCCGTCACTGCACTGGCAGAGTATCGTGGCAGTAGCCGCCGGTTTGAGTGGCGGGGTGATGTTGGT GGGATCACGGTGATTGACGATTATGCCCATCACCCAACCGAGGTGCAGGCCACGCTCCTGGCTGCCCGTCAGCGCTATCC GGATCGACGACTCATCGTCTATTTGCAACCGCACACCTTCAGCCGTACGCGCAGCCTCTGGGATCAGTGGCCGGCAGCGT TTCGTGAGGCAGCCGTTGTGCTGGTCGGCGATATTTATCCGGCCCGTGAGCAGGGCGATCCGGTCGCGCTGGCCCAGTCG CTGGTTGACCATCTGATTGCACACGGTATTCCGGCGCGCTACGCCGGCCCATCGGCGCTTGCGCCATCCGCACTGCTTGC GGTAGCGCAATCCGGTGATGTTGTGCTGACCCTAGGGGCCGGTGATAGTGATCAGGTGGCAGCAGCGTTTCTCGAACAGT GCAGCGCAATGTCAGAGGAGAGATGA
Upstream 100 bases:
>100_bases CGATCTTCTTCATGATTTTAGGGTTGATTATTTTGTTCAACTTTCCGAAGGTTTGGAAACCGTGAGTCACTATCATATCA TCGGGATTGCCGGAGCAGGG
Downstream 100 bases:
>100_bases GATGCCAGTTGCATTACCGGTAACGTTATACCCCGATGAGCCAATGGCGCGCCATTCGTCGTGGCGTGCCGGAGGAACGG CGCGCTATTATGCTGAGCCG
Product: UDP-N-acetylmuramate/alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MSAIAHLLLDQGHTVSGSDLTANHATAALQARGVQVWRGHDPAYVQGADVVLATAAIRGTHPELEAAAAAGIPRLSRADL WRLWSEQRPVIAIAGTHGKTTTTALTALALRGAGIRCGFLIGADVPALGGSAQWGDPEAPLVIEADEYDRVFLALTPALA IITNVEWDHPDVYPTPSEYTAAFAAFSRQVRDPRRLLVCADDPGALALAGQSEARLYGIDEHIATDPVSCRLAPLDWTAS GVTGTATGQQFDLWYYDRRSFGRRLAATVTLAIPGEHNVRNATAALAAAALWGADLRTAVTALAEYRGSSRRFEWRGDVG GITVIDDYAHHPTEVQATLLAARQRYPDRRLIVYLQPHTFSRTRSLWDQWPAAFREAAVVLVGDIYPAREQGDPVALAQS LVDHLIAHGIPARYAGPSALAPSALLAVAQSGDVVLTLGAGDSDQVAAAFLEQCSAMSEER
Sequences:
>Translated_461_residues MSAIAHLLLDQGHTVSGSDLTANHATAALQARGVQVWRGHDPAYVQGADVVLATAAIRGTHPELEAAAAAGIPRLSRADL WRLWSEQRPVIAIAGTHGKTTTTALTALALRGAGIRCGFLIGADVPALGGSAQWGDPEAPLVIEADEYDRVFLALTPALA IITNVEWDHPDVYPTPSEYTAAFAAFSRQVRDPRRLLVCADDPGALALAGQSEARLYGIDEHIATDPVSCRLAPLDWTAS GVTGTATGQQFDLWYYDRRSFGRRLAATVTLAIPGEHNVRNATAALAAAALWGADLRTAVTALAEYRGSSRRFEWRGDVG GITVIDDYAHHPTEVQATLLAARQRYPDRRLIVYLQPHTFSRTRSLWDQWPAAFREAAVVLVGDIYPAREQGDPVALAQS LVDHLIAHGIPARYAGPSALAPSALLAVAQSGDVVLTLGAGDSDQVAAAFLEQCSAMSEER >Mature_460_residues SAIAHLLLDQGHTVSGSDLTANHATAALQARGVQVWRGHDPAYVQGADVVLATAAIRGTHPELEAAAAAGIPRLSRADLW RLWSEQRPVIAIAGTHGKTTTTALTALALRGAGIRCGFLIGADVPALGGSAQWGDPEAPLVIEADEYDRVFLALTPALAI ITNVEWDHPDVYPTPSEYTAAFAAFSRQVRDPRRLLVCADDPGALALAGQSEARLYGIDEHIATDPVSCRLAPLDWTASG VTGTATGQQFDLWYYDRRSFGRRLAATVTLAIPGEHNVRNATAALAAAALWGADLRTAVTALAEYRGSSRRFEWRGDVGG ITVIDDYAHHPTEVQATLLAARQRYPDRRLIVYLQPHTFSRTRSLWDQWPAAFREAAVVLVGDIYPAREQGDPVALAQSL VDHLIAHGIPARYAGPSALAPSALLAVAQSGDVVLTLGAGDSDQVAAAFLEQCSAMSEER
Specific function: Cell wall formation
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family
Homologues:
Organism=Escherichia coli, GI1786279, Length=460, Percent_Identity=35, Blast_Score=198, Evalue=5e-52, Organism=Escherichia coli, GI1790680, Length=475, Percent_Identity=28.6315789473684, Blast_Score=146, Evalue=2e-36, Organism=Escherichia coli, GI1786276, Length=291, Percent_Identity=28.5223367697594, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURC_CHLAA (A9WG70)
Other databases:
- EMBL: CP000909 - RefSeq: YP_001634380.1 - ProteinModelPortal: A9WG70 - SMR: A9WG70 - GeneID: 5824837 - GenomeReviews: CP000909_GR - KEGG: cau:Caur_0753 - HOGENOM: HBG476594 - OMA: YHEFLGD - ProtClustDB: CLSK974974 - GO: GO:0005737 - HAMAP: MF_00046 - InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 - Gene3D: G3DSA:3.90.190.20 - Gene3D: G3DSA:3.40.1190.10 - Gene3D: G3DSA:3.40.50.720 - TIGRFAMs: TIGR01082
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; SSF53244 Mur_ligase_C; SSF53623 Mur_ligase_cen
EC number: =6.3.2.8
Molecular weight: Translated: 49190; Mature: 49059
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIAHLLLDQGHTVSGSDLTANHATAALQARGVQVWRGHDPAYVQGADVVLATAAIRGT CHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCEEECCCEEEEEEECCCC HPELEAAAAAGIPRLSRADLWRLWSEQRPVIAIAGTHGKTTTTALTALALRGAGIRCGFL CCHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEE IGADVPALGGSAQWGDPEAPLVIEADEYDRVFLALTPALAIITNVEWDHPDVYPTPSEYT ECCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEHHCHHHEEECCCCCCCCCCCCCHHHH AAFAAFSRQVRDPRRLLVCADDPGALALAGQSEARLYGIDEHIATDPVSCRLAPLDWTAS HHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCEEEECHHHHCCCCCCEEEECCCCCCC GVTGTATGQQFDLWYYDRRSFGRRLAATVTLAIPGEHNVRNATAALAAAALWGADLRTAV CCEECCCCCEEEEEEECHHHHCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHH TALAEYRGSSRRFEWRGDVGGITVIDDYAHHPTEVQATLLAARQRYPDRRLIVYLQPHTF HHHHHHCCCCCEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC SRTRSLWDQWPAAFREAAVVLVGDIYPAREQGDPVALAQSLVDHLIAHGIPARYAGPSAL HHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC APSALLAVAQSGDVVLTLGAGDSDQVAAAFLEQCSAMSEER CCHHHHHEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SAIAHLLLDQGHTVSGSDLTANHATAALQARGVQVWRGHDPAYVQGADVVLATAAIRGT HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCCEEECCCEEEEEEECCCC HPELEAAAAAGIPRLSRADLWRLWSEQRPVIAIAGTHGKTTTTALTALALRGAGIRCGFL CCHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEE IGADVPALGGSAQWGDPEAPLVIEADEYDRVFLALTPALAIITNVEWDHPDVYPTPSEYT ECCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEHHCHHHEEECCCCCCCCCCCCCHHHH AAFAAFSRQVRDPRRLLVCADDPGALALAGQSEARLYGIDEHIATDPVSCRLAPLDWTAS HHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCEEEECHHHHCCCCCCEEEECCCCCCC GVTGTATGQQFDLWYYDRRSFGRRLAATVTLAIPGEHNVRNATAALAAAALWGADLRTAV CCEECCCCCEEEEEEECHHHHCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHH TALAEYRGSSRRFEWRGDVGGITVIDDYAHHPTEVQATLLAARQRYPDRRLIVYLQPHTF HHHHHHCCCCCEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC SRTRSLWDQWPAAFREAAVVLVGDIYPAREQGDPVALAQSLVDHLIAHGIPARYAGPSAL HHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC APSALLAVAQSGDVVLTLGAGDSDQVAAAFLEQCSAMSEER CCHHHHHEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA