| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524097
Identifier: 222524097
GI number: 222524097
Start: 1025942
End: 1026760
Strand: Reverse
Name: 222524097
Synonym: Chy400_0813
Alternate gene names: NA
Gene position: 1026760-1025942 (Counterclockwise)
Preceding gene: 222524098
Following gene: 222524096
Centisome position: 19.49
GC content: 53.48
Gene sequence:
>819_bases ATGGAATACAATCCGCCAAATACTCGTGAACGAATCGTCGCCCGCCGTCAGCGTATGCGGCGAAACAGCACCGAGCCGGT CGTGCCCGGTTGGCGCTGGCGATTGCGTGAAGGCTTACGGAGCGGGCGGATTGTCAGCGGTATCGTGTTTGTCATCAGTT GTTTTGCGCTCTTCTACGTCCTGTTCAGCAGCCGGTTTCGGGTACAGACGGTAGAAGTTGTTGGGGCTGAGTTTTTAAGC CCGGAGCGCATTGTTGCCGCTGTTCCACTGCGGGGTCTACCGATCTGGCTGGTTGATGAAGAGCAGGCTGTTGCGCCATT GTTAACCAGTCCGTTTGTAGAGGAAGCCCGGCTGACGCTCAGTTTACCTGATCGAGCGCGGATTGTGATTGTCGAGCGCC AACCGGCGATTTACTGGCGAACCGGCGGGGTTGATTATCTGGTTGATCGGCAGGGATATGTTATTGAAGCTGCTGCAACA CCGCCCGCCGAAGATGAGTTAGTGATTGTCGATAGCTCAAATCTACCGGTCGAGCCAGGGATGCGACTGGATACCGATGC GTTGACGCTGGCCCGTGAACTGGCTTTTGTCCTGCCCAACCAGATCGGATTACATCCGGCACAGATCGGGTGGGATTTTG GGTTAGGGGTCTTTGTACGGACAGCGCAGGATCAAATGATTGTTTTTGGCCGTAGTGAAAGGCTTGAACGTAAATTGACA ATTCTTGCATATTTACTCGCCGATGGCACACCGTTTACCTATCTTGATCTACGACCAGTCAATCCATTTTATCAGTATCG TCCTGACGGCAGCTCATAA
Upstream 100 bases:
>100_bases CCCCAAAATGTGGGCAGCAAGCGGCCTGTCATACGCTCAGTTGCTGGATCGACTGGTTGATCTGGCACTGGAGCGTGCCA GGCGGTAGGAGATAGAGGGC
Downstream 100 bases:
>100_bases ACGATACCCGTTGGGTCAGGCAGCGAGGACACTATGGCACGCACCATGGCACGCACCATTGTTGGCATAGATGTAGGGAC AAGTAAAATCTGTACCATCG
Product: polypeptide-transport-associated protein domain-containing protein FtsQ-type
Products: NA
Alternate protein names: Polypeptide-Transport-Associated Domain Protein FtsQ-Type; Protein FtsQ Homolog
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MEYNPPNTRERIVARRQRMRRNSTEPVVPGWRWRLREGLRSGRIVSGIVFVISCFALFYVLFSSRFRVQTVEVVGAEFLS PERIVAAVPLRGLPIWLVDEEQAVAPLLTSPFVEEARLTLSLPDRARIVIVERQPAIYWRTGGVDYLVDRQGYVIEAAAT PPAEDELVIVDSSNLPVEPGMRLDTDALTLARELAFVLPNQIGLHPAQIGWDFGLGVFVRTAQDQMIVFGRSERLERKLT ILAYLLADGTPFTYLDLRPVNPFYQYRPDGSS
Sequences:
>Translated_272_residues MEYNPPNTRERIVARRQRMRRNSTEPVVPGWRWRLREGLRSGRIVSGIVFVISCFALFYVLFSSRFRVQTVEVVGAEFLS PERIVAAVPLRGLPIWLVDEEQAVAPLLTSPFVEEARLTLSLPDRARIVIVERQPAIYWRTGGVDYLVDRQGYVIEAAAT PPAEDELVIVDSSNLPVEPGMRLDTDALTLARELAFVLPNQIGLHPAQIGWDFGLGVFVRTAQDQMIVFGRSERLERKLT ILAYLLADGTPFTYLDLRPVNPFYQYRPDGSS >Mature_272_residues MEYNPPNTRERIVARRQRMRRNSTEPVVPGWRWRLREGLRSGRIVSGIVFVISCFALFYVLFSSRFRVQTVEVVGAEFLS PERIVAAVPLRGLPIWLVDEEQAVAPLLTSPFVEEARLTLSLPDRARIVIVERQPAIYWRTGGVDYLVDRQGYVIEAAAT PPAEDELVIVDSSNLPVEPGMRLDTDALTLARELAFVLPNQIGLHPAQIGWDFGLGVFVRTAQDQMIVFGRSERLERKLT ILAYLLADGTPFTYLDLRPVNPFYQYRPDGSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30828; Mature: 30828
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYNPPNTRERIVARRQRMRRNSTEPVVPGWRWRLREGLRSGRIVSGIVFVISCFALFYV CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LFSSRFRVQTVEVVGAEFLSPERIVAAVPLRGLPIWLVDEEQAVAPLLTSPFVEEARLTL HHCCCCEEEEEEEHHHHHCCCCCEEEECCCCCCEEEEECCCCHHHHHHHCCCHHHCEEEE SLPDRARIVIVERQPAIYWRTGGVDYLVDRQGYVIEAAATPPAEDELVIVDSSNLPVEPG ECCCCEEEEEEECCCEEEEECCCEEEEECCCCEEEEECCCCCCCCCEEEEECCCCCCCCC MRLDTDALTLARELAFVLPNQIGLHPAQIGWDFGLGVFVRTAQDQMIVFGRSERLERKLT CEECHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEEEECCCEEEEEECHHHHHHHHH ILAYLLADGTPFTYLDLRPVNPFYQYRPDGSS HHHHHHHCCCCEEEEEEEECCHHHEECCCCCC >Mature Secondary Structure MEYNPPNTRERIVARRQRMRRNSTEPVVPGWRWRLREGLRSGRIVSGIVFVISCFALFYV CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LFSSRFRVQTVEVVGAEFLSPERIVAAVPLRGLPIWLVDEEQAVAPLLTSPFVEEARLTL HHCCCCEEEEEEEHHHHHCCCCCEEEECCCCCCEEEEECCCCHHHHHHHCCCHHHCEEEE SLPDRARIVIVERQPAIYWRTGGVDYLVDRQGYVIEAAATPPAEDELVIVDSSNLPVEPG ECCCCEEEEEEECCCEEEEECCCEEEEECCCCEEEEECCCCCCCCCEEEEECCCCCCCCC MRLDTDALTLARELAFVLPNQIGLHPAQIGWDFGLGVFVRTAQDQMIVFGRSERLERKLT CEECHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEEEECCCEEEEEECHHHHHHHHH ILAYLLADGTPFTYLDLRPVNPFYQYRPDGSS HHHHHHHCCCCEEEEEEEECCHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA