Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222524097

Identifier: 222524097

GI number: 222524097

Start: 1025942

End: 1026760

Strand: Reverse

Name: 222524097

Synonym: Chy400_0813

Alternate gene names: NA

Gene position: 1026760-1025942 (Counterclockwise)

Preceding gene: 222524098

Following gene: 222524096

Centisome position: 19.49

GC content: 53.48

Gene sequence:

>819_bases
ATGGAATACAATCCGCCAAATACTCGTGAACGAATCGTCGCCCGCCGTCAGCGTATGCGGCGAAACAGCACCGAGCCGGT
CGTGCCCGGTTGGCGCTGGCGATTGCGTGAAGGCTTACGGAGCGGGCGGATTGTCAGCGGTATCGTGTTTGTCATCAGTT
GTTTTGCGCTCTTCTACGTCCTGTTCAGCAGCCGGTTTCGGGTACAGACGGTAGAAGTTGTTGGGGCTGAGTTTTTAAGC
CCGGAGCGCATTGTTGCCGCTGTTCCACTGCGGGGTCTACCGATCTGGCTGGTTGATGAAGAGCAGGCTGTTGCGCCATT
GTTAACCAGTCCGTTTGTAGAGGAAGCCCGGCTGACGCTCAGTTTACCTGATCGAGCGCGGATTGTGATTGTCGAGCGCC
AACCGGCGATTTACTGGCGAACCGGCGGGGTTGATTATCTGGTTGATCGGCAGGGATATGTTATTGAAGCTGCTGCAACA
CCGCCCGCCGAAGATGAGTTAGTGATTGTCGATAGCTCAAATCTACCGGTCGAGCCAGGGATGCGACTGGATACCGATGC
GTTGACGCTGGCCCGTGAACTGGCTTTTGTCCTGCCCAACCAGATCGGATTACATCCGGCACAGATCGGGTGGGATTTTG
GGTTAGGGGTCTTTGTACGGACAGCGCAGGATCAAATGATTGTTTTTGGCCGTAGTGAAAGGCTTGAACGTAAATTGACA
ATTCTTGCATATTTACTCGCCGATGGCACACCGTTTACCTATCTTGATCTACGACCAGTCAATCCATTTTATCAGTATCG
TCCTGACGGCAGCTCATAA

Upstream 100 bases:

>100_bases
CCCCAAAATGTGGGCAGCAAGCGGCCTGTCATACGCTCAGTTGCTGGATCGACTGGTTGATCTGGCACTGGAGCGTGCCA
GGCGGTAGGAGATAGAGGGC

Downstream 100 bases:

>100_bases
ACGATACCCGTTGGGTCAGGCAGCGAGGACACTATGGCACGCACCATGGCACGCACCATTGTTGGCATAGATGTAGGGAC
AAGTAAAATCTGTACCATCG

Product: polypeptide-transport-associated protein domain-containing protein FtsQ-type

Products: NA

Alternate protein names: Polypeptide-Transport-Associated Domain Protein FtsQ-Type; Protein FtsQ Homolog

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MEYNPPNTRERIVARRQRMRRNSTEPVVPGWRWRLREGLRSGRIVSGIVFVISCFALFYVLFSSRFRVQTVEVVGAEFLS
PERIVAAVPLRGLPIWLVDEEQAVAPLLTSPFVEEARLTLSLPDRARIVIVERQPAIYWRTGGVDYLVDRQGYVIEAAAT
PPAEDELVIVDSSNLPVEPGMRLDTDALTLARELAFVLPNQIGLHPAQIGWDFGLGVFVRTAQDQMIVFGRSERLERKLT
ILAYLLADGTPFTYLDLRPVNPFYQYRPDGSS

Sequences:

>Translated_272_residues
MEYNPPNTRERIVARRQRMRRNSTEPVVPGWRWRLREGLRSGRIVSGIVFVISCFALFYVLFSSRFRVQTVEVVGAEFLS
PERIVAAVPLRGLPIWLVDEEQAVAPLLTSPFVEEARLTLSLPDRARIVIVERQPAIYWRTGGVDYLVDRQGYVIEAAAT
PPAEDELVIVDSSNLPVEPGMRLDTDALTLARELAFVLPNQIGLHPAQIGWDFGLGVFVRTAQDQMIVFGRSERLERKLT
ILAYLLADGTPFTYLDLRPVNPFYQYRPDGSS
>Mature_272_residues
MEYNPPNTRERIVARRQRMRRNSTEPVVPGWRWRLREGLRSGRIVSGIVFVISCFALFYVLFSSRFRVQTVEVVGAEFLS
PERIVAAVPLRGLPIWLVDEEQAVAPLLTSPFVEEARLTLSLPDRARIVIVERQPAIYWRTGGVDYLVDRQGYVIEAAAT
PPAEDELVIVDSSNLPVEPGMRLDTDALTLARELAFVLPNQIGLHPAQIGWDFGLGVFVRTAQDQMIVFGRSERLERKLT
ILAYLLADGTPFTYLDLRPVNPFYQYRPDGSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30828; Mature: 30828

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYNPPNTRERIVARRQRMRRNSTEPVVPGWRWRLREGLRSGRIVSGIVFVISCFALFYV
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LFSSRFRVQTVEVVGAEFLSPERIVAAVPLRGLPIWLVDEEQAVAPLLTSPFVEEARLTL
HHCCCCEEEEEEEHHHHHCCCCCEEEECCCCCCEEEEECCCCHHHHHHHCCCHHHCEEEE
SLPDRARIVIVERQPAIYWRTGGVDYLVDRQGYVIEAAATPPAEDELVIVDSSNLPVEPG
ECCCCEEEEEEECCCEEEEECCCEEEEECCCCEEEEECCCCCCCCCEEEEECCCCCCCCC
MRLDTDALTLARELAFVLPNQIGLHPAQIGWDFGLGVFVRTAQDQMIVFGRSERLERKLT
CEECHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEEEECCCEEEEEECHHHHHHHHH
ILAYLLADGTPFTYLDLRPVNPFYQYRPDGSS
HHHHHHHCCCCEEEEEEEECCHHHEECCCCCC
>Mature Secondary Structure
MEYNPPNTRERIVARRQRMRRNSTEPVVPGWRWRLREGLRSGRIVSGIVFVISCFALFYV
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LFSSRFRVQTVEVVGAEFLSPERIVAAVPLRGLPIWLVDEEQAVAPLLTSPFVEEARLTL
HHCCCCEEEEEEEHHHHHCCCCCEEEECCCCCCEEEEECCCCHHHHHHHCCCHHHCEEEE
SLPDRARIVIVERQPAIYWRTGGVDYLVDRQGYVIEAAATPPAEDELVIVDSSNLPVEPG
ECCCCEEEEEEECCCEEEEECCCEEEEECCCCEEEEECCCCCCCCCEEEEECCCCCCCCC
MRLDTDALTLARELAFVLPNQIGLHPAQIGWDFGLGVFVRTAQDQMIVFGRSERLERKLT
CEECHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEEEECCCEEEEEECHHHHHHHHH
ILAYLLADGTPFTYLDLRPVNPFYQYRPDGSS
HHHHHHHCCCCEEEEEEEECCHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA