| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is glgP [H]
Identifier: 222524080
GI number: 222524080
Start: 1002974
End: 1005124
Strand: Reverse
Name: glgP [H]
Synonym: Chy400_0796
Alternate gene names: 222524080
Gene position: 1005124-1002974 (Counterclockwise)
Preceding gene: 222524083
Following gene: 222524079
Centisome position: 19.08
GC content: 55.88
Gene sequence:
>2151_bases ATGCTACGGTTTGAACATGAGATCCTGTTCACGCCTTGCCCGGAACGCATTGCGCGCCTTCGCGAACTTGCCTATAACCT CTGGTGGACATGGCATCCCGAAGCGCAAGACCTCTATCGCTCTATCGATCCAGAGCTATGGGAGCTGGTGTACCACAATC CGGTCGACTTTTTGCGTGATGTACGTCAGCGTAAGCTGGAAGCAGCAGCAAATGATCCGGCCTATTTGAAGCGGTACGAC GCGGTGCTCAAGAGCTTCGATAGCTACATGAGCGCGAAGAAGACCTGGTTTAGCAAAAACTATCCCGACGCCAAAGATAC TCTGATCGCGTATTTCAGTGCCGAGTTTGGTCTGCATGAGAGTCTACCCATCTACTCGGGTGGTCTGGGGATTCTGTCGG GTGATCACATCAAAGAGGCCAGCGATATGGGTATTCCGCTGGTCGGGGTTGGTTTTATCTATCCACAAGGTTATTTCCGC CAGCGCCTCGATCAGAGCGGCTGGCAGTTTGCTGAATATAACAAGCTCAATTTCGCCGATGTTCCGGCACTCCCGGCACT TGACCCGGAAGGTCGGGAAGTGGTGGTCGAGGTTGAGTTACCCGGACGTACCATCTACGCGAAGGTCTACAAGTTTCAGG TGGGCCGTAATGAGCTGTTGTTGATGGATACCGACATCCATCCCAACAGTCCGCAAGACCGGGAGCTTTCGGCCCGGCTC TACGGTGGTGATCAAGAGATGCGTATCTCGCAAGAGCTGGTGTTGGGTGTCGGTGGTGTCCGCGCATTACGCCGGCTCGG TTACAAACCGACCGTCTGGCACATGAACGAAGGCCATTCGGCGTTTCTGGTGCTTGAGTTGTGCCGTGAGCTGGTGGCGC AGGGCTATAGCTTCGAGCAGGCGATGGAACAGGTAAAGGCGCATTGTGTCTTTACCACCCACACACCGGTACCTGCCGGA AATGACGCCTTCCCCTTGCCGATGATTGAGAAGTTCTTCTGGAGCTTCTGGCCGCAATTAAACCTGACTCGTGATGAGTT TATGAGTCTGGCGCTGCAAGAGCAGCAGTGGGGGCCGACGTTTGCAATGACTGCGTTGGCCTTACGGTTTTCAGCGTTCC ACAATGGGGTGAGCAAACTCCACGGTCATGTTGCGCGTGGGATGTGGCAATGGCTCTACCCCGGTCGCAGCCAGGATGAA GTGCCGATTACCTCAATTACCAACGGTGTGCATACTGCGACCTGGCTGGCGCCCGAAATGCGCACGCTCTACAACTCGTA TCTCGGCAAGAATTGGGAAGACAATCTCGATGATCCACAGATCTGGCGGAAGGTGTACCAGATTCCTGATGAGACCTTCT GGCGTACTCGCCAGAAACTGAAGAGTGATCTGATCGCCTTCAGTCGGCAGCGTCTCCAACAGCATTATATGCGGCTGGGC ATTCCGGCGCCGGTCTGGCCGGTACTCGAAGAGAACATTCTGACCATCGGTTTCGCCCGGCGGTTTGCGACGTACAAGCG TGCAACCCTGCTGTTCAAAGATGTTGAGCGGCTGAAGTACATTCTCAACCGACCCGGCAAGCCCATCCAGATCATCTTTG CCGGGAAGGCTCACCCGAAGGATGATCCGGGCAAGCACTTTATTCAGGACGTGTATCGCATGGCGATGCAGCCGGGGCTG GCCGGACGGATCATTTTCCTCGAAGAGTACGACATAGCGGTTGGACGTGCTCTGGTGCAGGGGGTCGATGTCTGGCTGAA CAACCCGCGCCGCCCGTATGAGGCGAGTGGTACCAGTGGGATGAAAGCGAGCCTCAACGGTGCACCCAATTGTTCGGTGC TTGATGGCTGGTGGCCGGAAGCGTATAACGGTCGTAACGGTTGGGCGATTGGTGACGAGCGGGAGTACGCCAGTCAGGAG GAGCAGGACTGGAACGATGCGCAGTCGCTGTACCATTTGCTCGAACACGAGATTGCCCCCCGCTTCTACGACAATCGTGA TGCGAATGGGATTCCGGTTGAGTGGGTACAGATTTGCAAGGAGGCTATCGCTACGGTAGCGCCGCTCTTTAGCACGCGCC GGATGCTGGCCGACTATCTGCGCGAGATGTATATGCCGGTAGCAGTGCAGGATACACCAACCGGAGTGTAG
Upstream 100 bases:
>100_bases CATGGAAAAGTGTCAGACAACATGGCGGTGATAACAGAGTTCCTGGTATCATACCAGTACAAGCGGACATTGTTCATCAA TATGATGATGTGGGGGTATC
Downstream 100 bases:
>100_bases TGTTCAGACCGGCACGATGCTGATACATTGTCGATTGCGTTGAGGGATTCGTTGTGCAACCTGGAACGCCAAGCGATTCA ATGACGAGCTGGCAGCATCG
Product: alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 716; Mature: 716
Protein sequence:
>716_residues MLRFEHEILFTPCPERIARLRELAYNLWWTWHPEAQDLYRSIDPELWELVYHNPVDFLRDVRQRKLEAAANDPAYLKRYD AVLKSFDSYMSAKKTWFSKNYPDAKDTLIAYFSAEFGLHESLPIYSGGLGILSGDHIKEASDMGIPLVGVGFIYPQGYFR QRLDQSGWQFAEYNKLNFADVPALPALDPEGREVVVEVELPGRTIYAKVYKFQVGRNELLLMDTDIHPNSPQDRELSARL YGGDQEMRISQELVLGVGGVRALRRLGYKPTVWHMNEGHSAFLVLELCRELVAQGYSFEQAMEQVKAHCVFTTHTPVPAG NDAFPLPMIEKFFWSFWPQLNLTRDEFMSLALQEQQWGPTFAMTALALRFSAFHNGVSKLHGHVARGMWQWLYPGRSQDE VPITSITNGVHTATWLAPEMRTLYNSYLGKNWEDNLDDPQIWRKVYQIPDETFWRTRQKLKSDLIAFSRQRLQQHYMRLG IPAPVWPVLEENILTIGFARRFATYKRATLLFKDVERLKYILNRPGKPIQIIFAGKAHPKDDPGKHFIQDVYRMAMQPGL AGRIIFLEEYDIAVGRALVQGVDVWLNNPRRPYEASGTSGMKASLNGAPNCSVLDGWWPEAYNGRNGWAIGDEREYASQE EQDWNDAQSLYHLLEHEIAPRFYDNRDANGIPVEWVQICKEAIATVAPLFSTRRMLADYLREMYMPVAVQDTPTGV
Sequences:
>Translated_716_residues MLRFEHEILFTPCPERIARLRELAYNLWWTWHPEAQDLYRSIDPELWELVYHNPVDFLRDVRQRKLEAAANDPAYLKRYD AVLKSFDSYMSAKKTWFSKNYPDAKDTLIAYFSAEFGLHESLPIYSGGLGILSGDHIKEASDMGIPLVGVGFIYPQGYFR QRLDQSGWQFAEYNKLNFADVPALPALDPEGREVVVEVELPGRTIYAKVYKFQVGRNELLLMDTDIHPNSPQDRELSARL YGGDQEMRISQELVLGVGGVRALRRLGYKPTVWHMNEGHSAFLVLELCRELVAQGYSFEQAMEQVKAHCVFTTHTPVPAG NDAFPLPMIEKFFWSFWPQLNLTRDEFMSLALQEQQWGPTFAMTALALRFSAFHNGVSKLHGHVARGMWQWLYPGRSQDE VPITSITNGVHTATWLAPEMRTLYNSYLGKNWEDNLDDPQIWRKVYQIPDETFWRTRQKLKSDLIAFSRQRLQQHYMRLG IPAPVWPVLEENILTIGFARRFATYKRATLLFKDVERLKYILNRPGKPIQIIFAGKAHPKDDPGKHFIQDVYRMAMQPGL AGRIIFLEEYDIAVGRALVQGVDVWLNNPRRPYEASGTSGMKASLNGAPNCSVLDGWWPEAYNGRNGWAIGDEREYASQE EQDWNDAQSLYHLLEHEIAPRFYDNRDANGIPVEWVQICKEAIATVAPLFSTRRMLADYLREMYMPVAVQDTPTGV >Mature_716_residues MLRFEHEILFTPCPERIARLRELAYNLWWTWHPEAQDLYRSIDPELWELVYHNPVDFLRDVRQRKLEAAANDPAYLKRYD AVLKSFDSYMSAKKTWFSKNYPDAKDTLIAYFSAEFGLHESLPIYSGGLGILSGDHIKEASDMGIPLVGVGFIYPQGYFR QRLDQSGWQFAEYNKLNFADVPALPALDPEGREVVVEVELPGRTIYAKVYKFQVGRNELLLMDTDIHPNSPQDRELSARL YGGDQEMRISQELVLGVGGVRALRRLGYKPTVWHMNEGHSAFLVLELCRELVAQGYSFEQAMEQVKAHCVFTTHTPVPAG NDAFPLPMIEKFFWSFWPQLNLTRDEFMSLALQEQQWGPTFAMTALALRFSAFHNGVSKLHGHVARGMWQWLYPGRSQDE VPITSITNGVHTATWLAPEMRTLYNSYLGKNWEDNLDDPQIWRKVYQIPDETFWRTRQKLKSDLIAFSRQRLQQHYMRLG IPAPVWPVLEENILTIGFARRFATYKRATLLFKDVERLKYILNRPGKPIQIIFAGKAHPKDDPGKHFIQDVYRMAMQPGL AGRIIFLEEYDIAVGRALVQGVDVWLNNPRRPYEASGTSGMKASLNGAPNCSVLDGWWPEAYNGRNGWAIGDEREYASQE EQDWNDAQSLYHLLEHEIAPRFYDNRDANGIPVEWVQICKEAIATVAPLFSTRRMLADYLREMYMPVAVQDTPTGV
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI255653002, Length=376, Percent_Identity=24.2021276595745, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI71037379, Length=376, Percent_Identity=24.2021276595745, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI5032009, Length=510, Percent_Identity=22.9411764705882, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI257900462, Length=510, Percent_Identity=22.9411764705882, Blast_Score=78, Evalue=2e-14, Organism=Escherichia coli, GI2367228, Length=430, Percent_Identity=24.1860465116279, Blast_Score=84, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 82546; Mature: 82546
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRFEHEILFTPCPERIARLRELAYNLWWTWHPEAQDLYRSIDPELWELVYHNPVDFLRD CCEECCCEEECCCHHHHHHHHHHHHHCCEEECCCHHHHHHHCCHHHHHHHHCCHHHHHHH VRQRKLEAAANDPAYLKRYDAVLKSFDSYMSAKKTWFSKNYPDAKDTLIAYFSAEFGLHE HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEHHHHHHCCCCC SLPIYSGGLGILSGDHIKEASDMGIPLVGVGFIYPQGYFRQRLDQSGWQFAEYNKLNFAD CCCCCCCCCCCCCCCCHHHHHHCCCCEEEHHHHCCCHHHHHHHHHCCCCCHHCCCCCCCC VPALPALDPEGREVVVEVELPGRTIYAKVYKFQVGRNELLLMDTDIHPNSPQDRELSARL CCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEE YGGDQEMRISQELVLGVGGVRALRRLGYKPTVWHMNEGHSAFLVLELCRELVAQGYSFEQ ECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHH AMEQVKAHCVFTTHTPVPAGNDAFPLPMIEKFFWSFWPQLNLTRDEFMSLALQEQQWGPT HHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCH FAMTALALRFSAFHNGVSKLHGHVARGMWQWLYPGRSQDEVPITSITNGVHTATWLAPEM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHH RTLYNSYLGKNWEDNLDDPQIWRKVYQIPDETFWRTRQKLKSDLIAFSRQRLQQHYMRLG HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IPAPVWPVLEENILTIGFARRFATYKRATLLFKDVERLKYILNRPGKPIQIIFAGKAHPK CCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC DDPGKHFIQDVYRMAMQPGLAGRIIFLEEYDIAVGRALVQGVDVWLNNPRRPYEASGTSG CCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC MKASLNGAPNCSVLDGWWPEAYNGRNGWAIGDEREYASQEEQDWNDAQSLYHLLEHEIAP CEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHCCHHCCHHHHHHHHHHHHHHHCC RFYDNRDANGIPVEWVQICKEAIATVAPLFSTRRMLADYLREMYMPVAVQDTPTGV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCC >Mature Secondary Structure MLRFEHEILFTPCPERIARLRELAYNLWWTWHPEAQDLYRSIDPELWELVYHNPVDFLRD CCEECCCEEECCCHHHHHHHHHHHHHCCEEECCCHHHHHHHCCHHHHHHHHCCHHHHHHH VRQRKLEAAANDPAYLKRYDAVLKSFDSYMSAKKTWFSKNYPDAKDTLIAYFSAEFGLHE HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEHHHHHHCCCCC SLPIYSGGLGILSGDHIKEASDMGIPLVGVGFIYPQGYFRQRLDQSGWQFAEYNKLNFAD CCCCCCCCCCCCCCCCHHHHHHCCCCEEEHHHHCCCHHHHHHHHHCCCCCHHCCCCCCCC VPALPALDPEGREVVVEVELPGRTIYAKVYKFQVGRNELLLMDTDIHPNSPQDRELSARL CCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEE YGGDQEMRISQELVLGVGGVRALRRLGYKPTVWHMNEGHSAFLVLELCRELVAQGYSFEQ ECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHH AMEQVKAHCVFTTHTPVPAGNDAFPLPMIEKFFWSFWPQLNLTRDEFMSLALQEQQWGPT HHHHHHHEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCH FAMTALALRFSAFHNGVSKLHGHVARGMWQWLYPGRSQDEVPITSITNGVHTATWLAPEM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHH RTLYNSYLGKNWEDNLDDPQIWRKVYQIPDETFWRTRQKLKSDLIAFSRQRLQQHYMRLG HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IPAPVWPVLEENILTIGFARRFATYKRATLLFKDVERLKYILNRPGKPIQIIFAGKAHPK CCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC DDPGKHFIQDVYRMAMQPGLAGRIIFLEEYDIAVGRALVQGVDVWLNNPRRPYEASGTSG CCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC MKASLNGAPNCSVLDGWWPEAYNGRNGWAIGDEREYASQEEQDWNDAQSLYHLLEHEIAP CEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHCCHHCCHHHHHHHHHHHHHHHCC RFYDNRDANGIPVEWVQICKEAIATVAPLFSTRRMLADYLREMYMPVAVQDTPTGV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]