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The map label for this gene is 222524079

Identifier: 222524079

GI number: 222524079

Start: 1002108

End: 1002920

Strand: Reverse

Name: 222524079

Synonym: Chy400_0795

Alternate gene names: NA

Gene position: 1002920-1002108 (Counterclockwise)

Preceding gene: 222524080

Following gene: 222524078

Centisome position: 19.03

GC content: 57.69

Gene sequence:

>813_bases
GTGCAACCTGGAACGCCAAGCGATTCAATGACGAGCTGGCAGCATCGTGTCAGTCCACTTGATGTCTACCGGCGGCTGGT
GAGCCATTTTGGGGTGCTCTACGGCCCAGAGGCTCACCAGCCATGGTGGCCGATTATAAGTTCCAACCCACAGCTCGAAA
TTGTGATCGGTGCCGTGCTGGTGCAGCAGACGCGCTGGGAGACGGTTGAAGGTGCGATTGAGCGTCTCTATCGGGCCGGG
CTGATTGATTTGCATGCACTCGCTCAGGCGACGGTCGCCGATGTTGCCGAATTGATCTATCCCTGTGCCTTCTATCGTCA
GAAAGCTGCTGGATTGATTGCCCTCGCCCGTGCGATTAGTGAACGCTACGGCGATGTTGCGGCAATGTTGCGCCGCCCGA
CGGCAATGCTGCGCCGTGAATTGCTGACGTTGCCGCGCATTGGCCCGGAGACGGCAGATGTGATTATGCTCTATGCCGGC
GATCATCCATTGTTCGTGGTTGATGCCTACACCCGGCGGATTTTTGCGCGCCTGGTACCTGACGAGATTGCCTGGGATCG
AGCCAGTTACCATCAGGTTCAACACATCATTGCGGCTGCGCTGCCGTCTGATCCCCGATTACTGGCCGATTTCCATGCCC
AACTCAACGAGCTGGCTGTTCGTTATTGCCTGAGCCGACCACGGTGCGATGGCCCACCGGCCCGGCGGGTCTATTCACGA
CAGCCAGGCCGGAACAGTTTTCTTGATCGCCACGATGGTTGTCCATTACGTTCGGTGTGTACGTGGTATCAGGGCCATCG
CCAATTGTCTTAA

Upstream 100 bases:

>100_bases
AGATGTATATGCCGGTAGCAGTGCAGGATACACCAACCGGAGTGTAGTGTTCAGACCGGCACGATGCTGATACATTGTCG
ATTGCGTTGAGGGATTCGTT

Downstream 100 bases:

>100_bases
CGTGAGCGGCTATGTCAACATCACCACTGACCGTTTTCCTGGTGTTTTTACGCCTTGGTCTGACGTCATTTGGGGGGCCG
GTAGCTCATTTAGGTTATTT

Product: HhH-GPD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MQPGTPSDSMTSWQHRVSPLDVYRRLVSHFGVLYGPEAHQPWWPIISSNPQLEIVIGAVLVQQTRWETVEGAIERLYRAG
LIDLHALAQATVADVAELIYPCAFYRQKAAGLIALARAISERYGDVAAMLRRPTAMLRRELLTLPRIGPETADVIMLYAG
DHPLFVVDAYTRRIFARLVPDEIAWDRASYHQVQHIIAAALPSDPRLLADFHAQLNELAVRYCLSRPRCDGPPARRVYSR
QPGRNSFLDRHDGCPLRSVCTWYQGHRQLS

Sequences:

>Translated_270_residues
MQPGTPSDSMTSWQHRVSPLDVYRRLVSHFGVLYGPEAHQPWWPIISSNPQLEIVIGAVLVQQTRWETVEGAIERLYRAG
LIDLHALAQATVADVAELIYPCAFYRQKAAGLIALARAISERYGDVAAMLRRPTAMLRRELLTLPRIGPETADVIMLYAG
DHPLFVVDAYTRRIFARLVPDEIAWDRASYHQVQHIIAAALPSDPRLLADFHAQLNELAVRYCLSRPRCDGPPARRVYSR
QPGRNSFLDRHDGCPLRSVCTWYQGHRQLS
>Mature_270_residues
MQPGTPSDSMTSWQHRVSPLDVYRRLVSHFGVLYGPEAHQPWWPIISSNPQLEIVIGAVLVQQTRWETVEGAIERLYRAG
LIDLHALAQATVADVAELIYPCAFYRQKAAGLIALARAISERYGDVAAMLRRPTAMLRRELLTLPRIGPETADVIMLYAG
DHPLFVVDAYTRRIFARLVPDEIAWDRASYHQVQHIIAAALPSDPRLLADFHAQLNELAVRYCLSRPRCDGPPARRVYSR
QPGRNSFLDRHDGCPLRSVCTWYQGHRQLS

Specific function: Unknown

COG id: COG2231

COG function: function code L; Uncharacterized protein related to Endonuclease III

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Nth/MutY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011257
- InterPro:   IPR003651
- InterPro:   IPR003265
- InterPro:   IPR003583
- InterPro:   IPR023170 [H]

Pfam domain/function: PF00730 HhH-GPD [H]

EC number: 4.2.99.18

Molecular weight: Translated: 30585; Mature: 30585

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPGTPSDSMTSWQHRVSPLDVYRRLVSHFGVLYGPEAHQPWWPIISSNPQLEIVIGAVL
CCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCEEECCCCCCCCCCEECCCCCEEEHHHHHH
VQQTRWETVEGAIERLYRAGLIDLHALAQATVADVAELIYPCAFYRQKAAGLIALARAIS
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERYGDVAAMLRRPTAMLRRELLTLPRIGPETADVIMLYAGDHPLFVVDAYTRRIFARLVP
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHCC
DEIAWDRASYHQVQHIIAAALPSDPRLLADFHAQLNELAVRYCLSRPRCDGPPARRVYSR
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCC
QPGRNSFLDRHDGCPLRSVCTWYQGHRQLS
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQPGTPSDSMTSWQHRVSPLDVYRRLVSHFGVLYGPEAHQPWWPIISSNPQLEIVIGAVL
CCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCEEECCCCCCCCCCEECCCCCEEEHHHHHH
VQQTRWETVEGAIERLYRAGLIDLHALAQATVADVAELIYPCAFYRQKAAGLIALARAIS
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERYGDVAAMLRRPTAMLRRELLTLPRIGPETADVIMLYAGDHPLFVVDAYTRRIFARLVP
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHCC
DEIAWDRASYHQVQHIIAAALPSDPRLLADFHAQLNELAVRYCLSRPRCDGPPARRVYSR
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCC
QPGRNSFLDRHDGCPLRSVCTWYQGHRQLS
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]