| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is cysC
Identifier: 222524033
GI number: 222524033
Start: 932534
End: 933094
Strand: Reverse
Name: cysC
Synonym: Chy400_0748
Alternate gene names: 222524033
Gene position: 933094-932534 (Counterclockwise)
Preceding gene: 222524040
Following gene: 222524032
Centisome position: 17.71
GC content: 55.97
Gene sequence:
>561_bases GTGTCCACTATTCCAACAACCCGATCAGGACTTGTCGTCTGGTTTACCGGGCTTTCTGGCGCCGGGAAAACAACGCTGGC ACGGGCGCTGGCGACGCTGTTGCAAGAGGCCGGCTACCCGGTTGAACAGCTCGATGGCGATGTCGTTCGTGAACATTTGT CGAAGGGGTTAGGGTTTAGCCGCGAAGATCGTGATACGAATATCCGGCGGATTGGTTTTGTAGCCAATTTGCTGGCCAAA CACGGTGTGATCGTGTTGGTCAGTGCGATCAGTCCCTACCGGGAAACACGTGCTGAGGTGCTGGCTGCCGCACCCAGAAA ACTTGAGGTGTTTGTGGAGGCACCGCTAGATGTCCTCATTCAGCGTGATGTGAAGGGGCTGTACGCGAAGGCGTTGCGCG GCGAGATTGCGCAATTTACCGGTATCTCTGACCCTTACGAACCTCCGTTGCATCCCGATGTCCATCTGCGCACCGATCTG ATGAGTTTGCCGGAGTGTCTGGATCATCTGCTGGCTGCGCTGGAACGGCTGGATATTGTGGTGAAGGTGAGTCACCAATG A
Upstream 100 bases:
>100_bases CCGCTGCCATTTGGGAGACCGAAACTTTGCGGGCCGTAGCATCGATATGCTACGAGTGGTCTGCTGTACTCAATTACAGT CTTGGGATAAGGAGATGTTT
Downstream 100 bases:
>100_bases CAACACAATACTGGGACGCGAACACCGACCCTCGTGATGTCATTCGCTGGGCACTTGCCGGTTATCCCGATCTGCTGATG ACCAGTGCATTCAATCTTAA
Product: adenylylsulfate kinase
Products: NA
Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MSTIPTTRSGLVVWFTGLSGAGKTTLARALATLLQEAGYPVEQLDGDVVREHLSKGLGFSREDRDTNIRRIGFVANLLAK HGVIVLVSAISPYRETRAEVLAAAPRKLEVFVEAPLDVLIQRDVKGLYAKALRGEIAQFTGISDPYEPPLHPDVHLRTDL MSLPECLDHLLAALERLDIVVKVSHQ
Sequences:
>Translated_186_residues MSTIPTTRSGLVVWFTGLSGAGKTTLARALATLLQEAGYPVEQLDGDVVREHLSKGLGFSREDRDTNIRRIGFVANLLAK HGVIVLVSAISPYRETRAEVLAAAPRKLEVFVEAPLDVLIQRDVKGLYAKALRGEIAQFTGISDPYEPPLHPDVHLRTDL MSLPECLDHLLAALERLDIVVKVSHQ >Mature_185_residues STIPTTRSGLVVWFTGLSGAGKTTLARALATLLQEAGYPVEQLDGDVVREHLSKGLGFSREDRDTNIRRIGFVANLLAKH GVIVLVSAISPYRETRAEVLAAAPRKLEVFVEAPLDVLIQRDVKGLYAKALRGEIAQFTGISDPYEPPLHPDVHLRTDLM SLPECLDHLLAALERLDIVVKVSHQ
Specific function: Catalyzes the synthesis of activated sulfate
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the APS kinase family
Homologues:
Organism=Homo sapiens, GI46094058, Length=175, Percent_Identity=48.5714285714286, Blast_Score=156, Evalue=9e-39, Organism=Homo sapiens, GI34447231, Length=175, Percent_Identity=44.5714285714286, Blast_Score=144, Evalue=4e-35, Organism=Homo sapiens, GI62912492, Length=175, Percent_Identity=44.5714285714286, Blast_Score=144, Evalue=5e-35, Organism=Escherichia coli, GI1789107, Length=173, Percent_Identity=45.6647398843931, Blast_Score=138, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17542422, Length=170, Percent_Identity=44.7058823529412, Blast_Score=139, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6322852, Length=163, Percent_Identity=49.079754601227, Blast_Score=149, Evalue=2e-37, Organism=Drosophila melanogaster, GI24667032, Length=175, Percent_Identity=45.1428571428571, Blast_Score=138, Evalue=2e-33, Organism=Drosophila melanogaster, GI24667028, Length=175, Percent_Identity=45.1428571428571, Blast_Score=138, Evalue=2e-33, Organism=Drosophila melanogaster, GI24667036, Length=175, Percent_Identity=45.1428571428571, Blast_Score=138, Evalue=2e-33, Organism=Drosophila melanogaster, GI24667040, Length=175, Percent_Identity=45.1428571428571, Blast_Score=138, Evalue=2e-33, Organism=Drosophila melanogaster, GI116007838, Length=175, Percent_Identity=45.1428571428571, Blast_Score=137, Evalue=3e-33, Organism=Drosophila melanogaster, GI24667044, Length=175, Percent_Identity=45.1428571428571, Blast_Score=137, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYSC_CHLSY (B9LKC1)
Other databases:
- EMBL: CP001364 - RefSeq: YP_002568503.1 - ProteinModelPortal: B9LKC1 - GeneID: 7405887 - GenomeReviews: CP001364_GR - KEGG: chl:Chy400_0748 - OMA: ITITAFV - ProtClustDB: PRK00889 - HAMAP: MF_00065 - InterPro: IPR002891 - TIGRFAMs: TIGR00455
Pfam domain/function: PF01583 APS_kinase
EC number: =2.7.1.25
Molecular weight: Translated: 20383; Mature: 20252
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: ACT_SITE 91-91
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIPTTRSGLVVWFTGLSGAGKTTLARALATLLQEAGYPVEQLDGDVVREHLSKGLGFS CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCCC REDRDTNIRRIGFVANLLAKHGVIVLVSAISPYRETRAEVLAAAPRKLEVFVEAPLDVLI CCCCCCCHHHHHHHHHHHHHCCCEEEEEHHCHHHHHHHHHHHHCCCCEEEEECCHHHHHH QRDVKGLYAKALRGEIAQFTGISDPYEPPLHPDVHLRTDLMSLPECLDHLLAALERLDIV HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE VKVSHQ EEECCC >Mature Secondary Structure STIPTTRSGLVVWFTGLSGAGKTTLARALATLLQEAGYPVEQLDGDVVREHLSKGLGFS CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCCC REDRDTNIRRIGFVANLLAKHGVIVLVSAISPYRETRAEVLAAAPRKLEVFVEAPLDVLI CCCCCCCHHHHHHHHHHHHHCCCEEEEEHHCHHHHHHHHHHHHCCCCEEEEECCHHHHHH QRDVKGLYAKALRGEIAQFTGISDPYEPPLHPDVHLRTDLMSLPECLDHLLAALERLDIV HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEE VKVSHQ EEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA