| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524002
Identifier: 222524002
GI number: 222524002
Start: 899080
End: 900033
Strand: Reverse
Name: 222524002
Synonym: Chy400_0717
Alternate gene names: NA
Gene position: 900033-899080 (Counterclockwise)
Preceding gene: 222524004
Following gene: 222524001
Centisome position: 17.08
GC content: 55.97
Gene sequence:
>954_bases ATGCTTGACTGGCTGTTGAACTGGGGGAACCGACCGAAAGCGGGTGCTCAGCCGACGATTGTGCGTGGTGACCGTCCCGG TGTGCCGATACCGCTGAATGTAGCGCTAATTGTCCACGATCCACCTATTCCCGAACGAGGGAACCTGCCGTTAAGCAAGG TGATGGGCTGGTACGATCCTGAAGTACTGGCAGCGCAGTATATCGCCGATCTCCGTATTTGCTCAGGGGGGATTGCCGAT TACCGGATTGTCGTGCGGCGCACGTTTACCGATTTTCCGGTGAAGATTGACGGCTTTCGCTACAATAGCGCGACCTATCT GGCTGCCTGGGAACGCCGCATCCCTTTTCATCAGCCCGATGAAGCAGATTATGAGCGATTGCTGGCCGAGATTGGTTTAG GCGATGCCATTGATCGGGGTGAGATTGACGAAATCTGGCTATTCGGTTTTCCCTATGCCGGCTATTATGAGAGTCGGATG ATTGGCCCCGCTGCCTTCTGGTGCAATGCGCCGCCGCTGCACATTCCTGCCGCACGCCGCTATATTGTGATGGGGTTTAA TGTCGAGCGTGATGTTGGCTGTATGCTGGAGAACTTTGGTCATCGGGTTGAGTCGATTATGACCTACGTCTATCGGCATC ACCCGGCTGAACGCAATCTGTGGACGCGCTTCACCCGCCTTGATGAGTGCGGTAACGTCCATTTTGCGCCTTCCAGCACC CGTGATTACGATTGGGGAAATCCGCGTCGGGTGGAGTCACGGGCCGACGCCTGGTACCAGTTTCCCGACTTGAGCGCACC ACCGCGACTGATGGATTGTGCCGAGTGGGGAAATGGCGATATGCGTCTCCATCATCTCTGGTGGCTCGACCATCTGCCGC GAGTTGCCGGTGAAACTGATGGCGTCCTCAACAACTGGTGGCATTACATTTTACAGCCGTGGGTCGTGCAATGA
Upstream 100 bases:
>100_bases CGCCTATGTGTATGACTGGTTCGGAGCGATTCTGCGACAATGTGACGGTTGGACATTGTTTACTTCTCATGCGCCATACC GCTGAATGGAGGCAACGGCG
Downstream 100 bases:
>100_bases TGTCGTCAGCACAGCAAACCGGGTGGTGGCAACGGTTAACCGCCTATTTCAATAACGGTCAGCATACATTAATGATGGCA GCCTATGCCGTCATCACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MLDWLLNWGNRPKAGAQPTIVRGDRPGVPIPLNVALIVHDPPIPERGNLPLSKVMGWYDPEVLAAQYIADLRICSGGIAD YRIVVRRTFTDFPVKIDGFRYNSATYLAAWERRIPFHQPDEADYERLLAEIGLGDAIDRGEIDEIWLFGFPYAGYYESRM IGPAAFWCNAPPLHIPAARRYIVMGFNVERDVGCMLENFGHRVESIMTYVYRHHPAERNLWTRFTRLDECGNVHFAPSST RDYDWGNPRRVESRADAWYQFPDLSAPPRLMDCAEWGNGDMRLHHLWWLDHLPRVAGETDGVLNNWWHYILQPWVVQ
Sequences:
>Translated_317_residues MLDWLLNWGNRPKAGAQPTIVRGDRPGVPIPLNVALIVHDPPIPERGNLPLSKVMGWYDPEVLAAQYIADLRICSGGIAD YRIVVRRTFTDFPVKIDGFRYNSATYLAAWERRIPFHQPDEADYERLLAEIGLGDAIDRGEIDEIWLFGFPYAGYYESRM IGPAAFWCNAPPLHIPAARRYIVMGFNVERDVGCMLENFGHRVESIMTYVYRHHPAERNLWTRFTRLDECGNVHFAPSST RDYDWGNPRRVESRADAWYQFPDLSAPPRLMDCAEWGNGDMRLHHLWWLDHLPRVAGETDGVLNNWWHYILQPWVVQ >Mature_317_residues MLDWLLNWGNRPKAGAQPTIVRGDRPGVPIPLNVALIVHDPPIPERGNLPLSKVMGWYDPEVLAAQYIADLRICSGGIAD YRIVVRRTFTDFPVKIDGFRYNSATYLAAWERRIPFHQPDEADYERLLAEIGLGDAIDRGEIDEIWLFGFPYAGYYESRM IGPAAFWCNAPPLHIPAARRYIVMGFNVERDVGCMLENFGHRVESIMTYVYRHHPAERNLWTRFTRLDECGNVHFAPSST RDYDWGNPRRVESRADAWYQFPDLSAPPRLMDCAEWGNGDMRLHHLWWLDHLPRVAGETDGVLNNWWHYILQPWVVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36732; Mature: 36732
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDWLLNWGNRPKAGAQPTIVRGDRPGVPIPLNVALIVHDPPIPERGNLPLSKVMGWYDP CCCCEECCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHCCCCH EVLAAQYIADLRICSGGIADYRIVVRRTFTDFPVKIDGFRYNSATYLAAWERRIPFHQPD HHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEECEEECCEEEEEEHHHCCCCCCCC EADYERLLAEIGLGDAIDRGEIDEIWLFGFPYAGYYESRMIGPAAFWCNAPPLHIPAARR HHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHCCCCCHHEECCCCCCCCCCCCE YIVMGFNVERDVGCMLENFGHRVESIMTYVYRHHPAERNLWTRFTRLDECGNVHFAPSST EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEECCCCC RDYDWGNPRRVESRADAWYQFPDLSAPPRLMDCAEWGNGDMRLHHLWWLDHLPRVAGETD CCCCCCCCCCHHHHHHHEEECCCCCCCCHHHHHHHCCCCCEEEEEEECHHHHHHHCCCCC GVLNNWWHYILQPWVVQ CHHHHHHHHHHCCCCCC >Mature Secondary Structure MLDWLLNWGNRPKAGAQPTIVRGDRPGVPIPLNVALIVHDPPIPERGNLPLSKVMGWYDP CCCCEECCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHCCCCH EVLAAQYIADLRICSGGIADYRIVVRRTFTDFPVKIDGFRYNSATYLAAWERRIPFHQPD HHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEECEEECCEEEEEEHHHCCCCCCCC EADYERLLAEIGLGDAIDRGEIDEIWLFGFPYAGYYESRMIGPAAFWCNAPPLHIPAARR HHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHCCCCCHHEECCCCCCCCCCCCE YIVMGFNVERDVGCMLENFGHRVESIMTYVYRHHPAERNLWTRFTRLDECGNVHFAPSST EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEECCCCC RDYDWGNPRRVESRADAWYQFPDLSAPPRLMDCAEWGNGDMRLHHLWWLDHLPRVAGETD CCCCCCCCCCHHHHHHHEEECCCCCCCCHHHHHHHCCCCCEEEEEEECHHHHHHHCCCCC GVLNNWWHYILQPWVVQ CHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA