| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is gmuE [H]
Identifier: 222523911
GI number: 222523911
Start: 758890
End: 759792
Strand: Reverse
Name: gmuE [H]
Synonym: Chy400_0621
Alternate gene names: 222523911
Gene position: 759792-758890 (Counterclockwise)
Preceding gene: 222523912
Following gene: 222523905
Centisome position: 14.42
GC content: 61.68
Gene sequence:
>903_bases ATGACGCATGCCCCTCTCTACGGTGGGATTGAGGCCGGTGGAACCAAGTGGGTTTGTGCGATTGGCACCGGGCCGGATGA TATTCGGGCTGAGGTGCGTTTTCCAACCACGACACCTGCCGAGACGCTGGCCAATGCCATCGCCTTTTTTCGTGCCCACG AACCGGAACACCTGGCGGCCATCGGCGTGGGTTCGTTTGGGCCGGTCGATCTCAATCCGGCCTCGCCGTCGTATGGCTCA ATCACGACGACGCCGAAGCCGGGATGGGCGCACACTGATGTTGTGCGGACACTGCACCAGGCCCTTGGGCGACCGATAGG CTTCGATACTGATGTCAATGTGGCGCTCCTCGGCGAACGGCAATGGGGAGCAGCGCGTGACTGCGATGTGGCGGTGTACA TCACAGTCGGTACCGGCATTGGCGGCGGGGCAGTGGTTGGTGGGAAGCTGGTACACGGCTTGATCCACCCGGAGATGGGG CATATGCGTCTGGTGCGTGATCCGGCGCGTGATCCCTTCCCCGGTATCTGTCCGTACCATAGCGATTGTCTGGAGGGGTT GGCTTGTGGGCCGGCGCTTAAGGCACGCTGGCAGACTCCGGCTGAGGAGCTGCCGGCTGACCATCCGGCGTGGGAACTCG AAGCTGATTATCTCGGTCAGGCGCTGGCAAATCTGCTCTGCATCCTTTCGCCGGAACGCATTATCATCGGCGGTGGGGTG ATGAGTCAGCCGCAGATGTTTCCATTGGTGCGGGCTGCGACGCAGCGCTGGCTGAATGGTTATTTGCAGCATCCTCACAT TCTCGATCACCCTGACAGGTTGATTGTGCCACCTGCACTGGGGCAACGGGCCGGCGTGTTGGGGGCAATTGCGCTGGCGA TGCATACGGCAGGCGGGGTATAG
Upstream 100 bases:
>100_bases GCTGGCCCGTGATCTGTTGCTGGATCGGTGAAGCATACGTCTGTATCGTTAGATCGTAGCAGGTGCGATCTGAACTGCTC GTGGTAGAAGCGAGGTTTGT
Downstream 100 bases:
>100_bases ACGGCCCGGTATAGAAAGGAAGCGTTATGCTGATAGCTCGCGATCTGGCTCCTGATTTGATCATCTACAACGCTGTCGTG TATACGCTCCACCGGGAATT
Product: ROK family protein
Products: NA
Alternate protein names: Glucomannan utilization protein E [H]
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTHAPLYGGIEAGGTKWVCAIGTGPDDIRAEVRFPTTTPAETLANAIAFFRAHEPEHLAAIGVGSFGPVDLNPASPSYGS ITTTPKPGWAHTDVVRTLHQALGRPIGFDTDVNVALLGERQWGAARDCDVAVYITVGTGIGGGAVVGGKLVHGLIHPEMG HMRLVRDPARDPFPGICPYHSDCLEGLACGPALKARWQTPAEELPADHPAWELEADYLGQALANLLCILSPERIIIGGGV MSQPQMFPLVRAATQRWLNGYLQHPHILDHPDRLIVPPALGQRAGVLGAIALAMHTAGGV
Sequences:
>Translated_300_residues MTHAPLYGGIEAGGTKWVCAIGTGPDDIRAEVRFPTTTPAETLANAIAFFRAHEPEHLAAIGVGSFGPVDLNPASPSYGS ITTTPKPGWAHTDVVRTLHQALGRPIGFDTDVNVALLGERQWGAARDCDVAVYITVGTGIGGGAVVGGKLVHGLIHPEMG HMRLVRDPARDPFPGICPYHSDCLEGLACGPALKARWQTPAEELPADHPAWELEADYLGQALANLLCILSPERIIIGGGV MSQPQMFPLVRAATQRWLNGYLQHPHILDHPDRLIVPPALGQRAGVLGAIALAMHTAGGV >Mature_299_residues THAPLYGGIEAGGTKWVCAIGTGPDDIRAEVRFPTTTPAETLANAIAFFRAHEPEHLAAIGVGSFGPVDLNPASPSYGSI TTTPKPGWAHTDVVRTLHQALGRPIGFDTDVNVALLGERQWGAARDCDVAVYITVGTGIGGGAVVGGKLVHGLIHPEMGH MRLVRDPARDPFPGICPYHSDCLEGLACGPALKARWQTPAEELPADHPAWELEADYLGQALANLLCILSPERIIIGGGVM SQPQMFPLVRAATQRWLNGYLQHPHILDHPDRLIVPPALGQRAGVLGAIALAMHTAGGV
Specific function: Seems to be involved in the degradation of glucomannan [H]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 31705; Mature: 31573
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: PS01125 ROK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHAPLYGGIEAGGTKWVCAIGTGPDDIRAEVRFPTTTPAETLANAIAFFRAHEPEHLAA CCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEE IGVGSFGPVDLNPASPSYGSITTTPKPGWAHTDVVRTLHQALGRPIGFDTDVNVALLGER EECCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECC QWGAARDCDVAVYITVGTGIGGGAVVGGKLVHGLIHPEMGHMRLVRDPARDPFPGICPYH CCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCH SDCLEGLACGPALKARWQTPAEELPADHPAWELEADYLGQALANLLCILSPERIIIGGGV HHHHHHHHCCHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC MSQPQMFPLVRAATQRWLNGYLQHPHILDHPDRLIVPPALGQRAGVLGAIALAMHTAGGV CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure THAPLYGGIEAGGTKWVCAIGTGPDDIRAEVRFPTTTPAETLANAIAFFRAHEPEHLAA CCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEE IGVGSFGPVDLNPASPSYGSITTTPKPGWAHTDVVRTLHQALGRPIGFDTDVNVALLGER EECCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECC QWGAARDCDVAVYITVGTGIGGGAVVGGKLVHGLIHPEMGHMRLVRDPARDPFPGICPYH CCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCH SDCLEGLACGPALKARWQTPAEELPADHPAWELEADYLGQALANLLCILSPERIIIGGGV HHHHHHHHCCHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC MSQPQMFPLVRAATQRWLNGYLQHPHILDHPDRLIVPPALGQRAGVLGAIALAMHTAGGV CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9202461; 9384377 [H]