Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222523902

Identifier: 222523902

GI number: 222523902

Start: 748513

End: 749064

Strand: Reverse

Name: 222523902

Synonym: Chy400_0611

Alternate gene names: NA

Gene position: 749064-748513 (Counterclockwise)

Preceding gene: 222523903

Following gene: 222523901

Centisome position: 14.22

GC content: 56.88

Gene sequence:

>552_bases
ATGCGACGTCTCTTTTTCCTTTCGATTACAGCAGCTTTGCTGGTGGTATTGGTCGGTTGTGGGGCGAATCAAAGTGGTAC
GACCGGTAGTGGGATTACGGTGCGCGATCCGTGGGTGCGGGCCGCGATGATGAATATGGCCGGCGATCAGTCCGGCGCGA
TGGGGAATATGGGCAATCAGGCCACCCCAATGGCCGGGATGGGCAACAGCCACGGCAATGGTCACGCGAATGCAGGCAGT
TCGGCTGTCAGCGCCGCGTATATGGTGATCGTCAACAATGGCGCTGCGGACGCGATTGTGAAGGCCGAGAGCGATGTTGC
AGCATCGGTTGAACTGCATAACGTGGTGATGGAAAATAATGTCATGCAGATGCGACAGGTTGAAGCCATCGAGGTGCCGG
CCAATGGTCAGGTTGAACTGAAGCCGGGTGGTTTCCACGTGATGTTGATCGGTCTGAACCGTGACCTCAAAGAGGGTGAT
GAAGTGACGATCAAACTCACCACGCGTAGCGGGCAAACCATCGAGGTCAAGGCACCGGTGCGCATGCCGTAG

Upstream 100 bases:

>100_bases
CACGCCCCGCCCCGGCCTGTTAGTTGGATAGACGATACGGAAGCCTGGGCAGGGTTTAGTAGTCGTGTCTTGTTTTGTCT
TTACGTTGCGAGGTGCTACA

Downstream 100 bases:

>100_bases
GCGATCTGGACGGGGCGAACAGAACATGCGAGCGCGTTCGGGATGAATGCCCTCACCCCCGCCCTCTCCCGCGCAGCGCG
GGAGAGGGGGAATTGGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MRRLFFLSITAALLVVLVGCGANQSGTTGSGITVRDPWVRAAMMNMAGDQSGAMGNMGNQATPMAGMGNSHGNGHANAGS
SAVSAAYMVIVNNGAADAIVKAESDVAASVELHNVVMENNVMQMRQVEAIEVPANGQVELKPGGFHVMLIGLNRDLKEGD
EVTIKLTTRSGQTIEVKAPVRMP

Sequences:

>Translated_183_residues
MRRLFFLSITAALLVVLVGCGANQSGTTGSGITVRDPWVRAAMMNMAGDQSGAMGNMGNQATPMAGMGNSHGNGHANAGS
SAVSAAYMVIVNNGAADAIVKAESDVAASVELHNVVMENNVMQMRQVEAIEVPANGQVELKPGGFHVMLIGLNRDLKEGD
EVTIKLTTRSGQTIEVKAPVRMP
>Mature_183_residues
MRRLFFLSITAALLVVLVGCGANQSGTTGSGITVRDPWVRAAMMNMAGDQSGAMGNMGNQATPMAGMGNSHGNGHANAGS
SAVSAAYMVIVNNGAADAIVKAESDVAASVELHNVVMENNVMQMRQVEAIEVPANGQVELKPGGFHVMLIGLNRDLKEGD
EVTIKLTTRSGQTIEVKAPVRMP

Specific function: Unknown

COG id: COG2847

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007410 [H]

Pfam domain/function: PF04314 DUF461 [H]

EC number: NA

Molecular weight: Translated: 19050; Mature: 19050

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
7.7 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
7.7 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLFFLSITAALLVVLVGCGANQSGTTGSGITVRDPWVRAAMMNMAGDQSGAMGNMGNQ
CCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCC
ATPMAGMGNSHGNGHANAGSSAVSAAYMVIVNNGAADAIVKAESDVAASVELHNVVMENN
CCCCCCCCCCCCCCCCCCCCCHHEEEEEEEEECCCCCEEEECCCCCEEEEEEEEEEECCC
VMQMRQVEAIEVPANGQVELKPGGFHVMLIGLNRDLKEGDEVTIKLTTRSGQTIEVKAPV
CHHEEEEEEEECCCCCEEEECCCCEEEEEEECCCCCCCCCEEEEEEEECCCCEEEEECCC
RMP
CCC
>Mature Secondary Structure
MRRLFFLSITAALLVVLVGCGANQSGTTGSGITVRDPWVRAAMMNMAGDQSGAMGNMGNQ
CCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCC
ATPMAGMGNSHGNGHANAGSSAVSAAYMVIVNNGAADAIVKAESDVAASVELHNVVMENN
CCCCCCCCCCCCCCCCCCCCCHHEEEEEEEEECCCCCEEEECCCCCEEEEEEEEEEECCC
VMQMRQVEAIEVPANGQVELKPGGFHVMLIGLNRDLKEGDEVTIKLTTRSGQTIEVKAPV
CHHEEEEEEEECCCCCEEEECCCCEEEEEEECCCCCCCCCEEEEEEEECCCCEEEEECCC
RMP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA