| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523798
Identifier: 222523798
GI number: 222523798
Start: 605045
End: 605425
Strand: Reverse
Name: 222523798
Synonym: Chy400_0506
Alternate gene names: NA
Gene position: 605425-605045 (Counterclockwise)
Preceding gene: 222523799
Following gene: 222523797
Centisome position: 11.49
GC content: 55.12
Gene sequence:
>381_bases ATGCCAATCTACGAGTATCTCTGTCCAGCATGTAACGGTCAGTTTCAAAAACTGGTACGTGGATTCAGTGATCCGCCCGG TCTGGCCTGTCCACGCTGCGGCAACACGGGGGTGCGTCGTGCAATCTCGCGCTTTGCGACCCTCAAATCAGAAGAAGATC GTCTTGAATCACTTGCCGATCCTTCGACGTTCATGGGACTTGACGAAAGCGACCCCCGCTCGATTGCACGCTGGGCCAAG CGATTGGGAAAGGAGCTGGGTGAAGATGCCGGCGAAGACTGGGACGAGATGGTCGATCAGATGCTCGAAGAAGAACTAAG CGGCAAGAAAGACGATGAGAGCAGCTCAACCGGGAAGCCGGATGATTTAGGTTGGGCCTGA
Upstream 100 bases:
>100_bases TCCAGCTTGCCTATACTATCCATGATACGCCACCACCGCCATTGCCCTTGGTTGAAGAGATTATCCGGTAAAGCCGGGTG ACCAGGAAATAGAGGTTGCT
Downstream 100 bases:
>100_bases TCAGGAGCGGGACGGTTCATTTACCAGTTGCAATTCTCACGTTGCAAAACCCGTGCTACCTTTGAGGTAGCTTGCATAGG CTGATTGGTACACACACCGA
Product: FmdB family regulatory protein
Products: NA
Alternate protein names: Regulatory Protein FmdB Family
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MPIYEYLCPACNGQFQKLVRGFSDPPGLACPRCGNTGVRRAISRFATLKSEEDRLESLADPSTFMGLDESDPRSIARWAK RLGKELGEDAGEDWDEMVDQMLEEELSGKKDDESSSTGKPDDLGWA
Sequences:
>Translated_126_residues MPIYEYLCPACNGQFQKLVRGFSDPPGLACPRCGNTGVRRAISRFATLKSEEDRLESLADPSTFMGLDESDPRSIARWAK RLGKELGEDAGEDWDEMVDQMLEEELSGKKDDESSSTGKPDDLGWA >Mature_125_residues PIYEYLCPACNGQFQKLVRGFSDPPGLACPRCGNTGVRRAISRFATLKSEEDRLESLADPSTFMGLDESDPRSIARWAKR LGKELGEDAGEDWDEMVDQMLEEELSGKKDDESSSTGKPDDLGWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13978; Mature: 13846
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIYEYLCPACNGQFQKLVRGFSDPPGLACPRCGNTGVRRAISRFATLKSEEDRLESLAD CCHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCC PSTFMGLDESDPRSIARWAKRLGKELGEDAGEDWDEMVDQMLEEELSGKKDDESSSTGKP CHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC DDLGWA CCCCCC >Mature Secondary Structure PIYEYLCPACNGQFQKLVRGFSDPPGLACPRCGNTGVRRAISRFATLKSEEDRLESLAD CHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCC PSTFMGLDESDPRSIARWAKRLGKELGEDAGEDWDEMVDQMLEEELSGKKDDESSSTGKP CHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC DDLGWA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA