| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is thiM
Identifier: 222523695
GI number: 222523695
Start: 473525
End: 474334
Strand: Reverse
Name: thiM
Synonym: Chy400_0401
Alternate gene names: 222523695
Gene position: 474334-473525 (Counterclockwise)
Preceding gene: 222523696
Following gene: 222523694
Centisome position: 9.0
GC content: 60.12
Gene sequence:
>810_bases ATGACTCTGAACGAGCGGATCGCGGAGTTGCGCGAACGGGTGCGCCAGCAGCGCCCCCTCATTCACCACATTACCAATTT TGTGGTGATGAATGATACGGCCAATGTAACGCTGCACATCGGTGGGTTGCCGGTTATGGCGCATGATCGAGCCGAGGTGG CCGAGATGGTGACCGCTGCAGGTGCGCTGGTGTTGAATGTGGGCACGTTGTCGCCTGATTGGATTGAAGCGATGTTGATT GCCGGTCGGCGGGCAAACGAGCTGGGGATTCCTATCGTGCTCGATCCGGTGGGTGCTGGTGCGACAAGCCTGCGCACGGC GAGTAATCGGCGGTTGCTTGAAGAGCTTCAGATTGCGGTGGTGCGGGGTAATTCCGGCGAGATCGGTGCGCTGGCCGGGA TGGGTGGCGTGGTCAAAGGGGTCGAGACGGTGGTTGAGGTCGATGATCCGACCGCAGCCGCGAAGGCGCTGGCCCAACAG TACCGTACTGTGGTTGCTGTTACCGGTCGGCAAGATGTCGTGACCGATGGGAAGCGGGTGTTTCTGGTCGATAATGGTCA TGAATGGCTGAAGACGCTCACCGGCACTGGCTGTTCGGCAACCACGGTTATCGCTGCATTTGCTGCAGTTGAGCGCGAGT ATCCCTTTGCCGCAGCGGCTGCGCTGGCCTGTTTTGGTCTGGCCGCCGAACTGGCCGCGCCGGCAGCACGTGGGCCGGCA AGCTTTAAGGTGGCCTTTTACGATGCTATCTACCATCTTTCGGCTGATCAGATTCGTGCCGGGGCACGGGTAACTGCTGT TGCAGGGTAG
Upstream 100 bases:
>100_bases GCACCGTCTGCATTGCGGAATAACCGTCCTGCCGCGGCAGGGCGGTTTTTTGCTACCTGCCCAATGATGTTCCGCCGTCT GCTGGCGCAAGGAGGCCATG
Downstream 100 bases:
>100_bases TTTCCCTGATAAGGAAAGGATCTGCCTGTGAGTATCGCCCATATTGTTGACTGGCGGCTGTATGTCGTCACTGATGCCGG GCTGTCGCGAGGCCGTTCAC
Product: hydroxyethylthiazole kinase
Products: NA
Alternate protein names: 4-methyl-5-beta-hydroxyethylthiazole kinase; TH kinase; Thz kinase
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MTLNERIAELRERVRQQRPLIHHITNFVVMNDTANVTLHIGGLPVMAHDRAEVAEMVTAAGALVLNVGTLSPDWIEAMLI AGRRANELGIPIVLDPVGAGATSLRTASNRRLLEELQIAVVRGNSGEIGALAGMGGVVKGVETVVEVDDPTAAAKALAQQ YRTVVAVTGRQDVVTDGKRVFLVDNGHEWLKTLTGTGCSATTVIAAFAAVEREYPFAAAAALACFGLAAELAAPAARGPA SFKVAFYDAIYHLSADQIRAGARVTAVAG
Sequences:
>Translated_269_residues MTLNERIAELRERVRQQRPLIHHITNFVVMNDTANVTLHIGGLPVMAHDRAEVAEMVTAAGALVLNVGTLSPDWIEAMLI AGRRANELGIPIVLDPVGAGATSLRTASNRRLLEELQIAVVRGNSGEIGALAGMGGVVKGVETVVEVDDPTAAAKALAQQ YRTVVAVTGRQDVVTDGKRVFLVDNGHEWLKTLTGTGCSATTVIAAFAAVEREYPFAAAAALACFGLAAELAAPAARGPA SFKVAFYDAIYHLSADQIRAGARVTAVAG >Mature_268_residues TLNERIAELRERVRQQRPLIHHITNFVVMNDTANVTLHIGGLPVMAHDRAEVAEMVTAAGALVLNVGTLSPDWIEAMLIA GRRANELGIPIVLDPVGAGATSLRTASNRRLLEELQIAVVRGNSGEIGALAGMGGVVKGVETVVEVDDPTAAAKALAQQY RTVVAVTGRQDVVTDGKRVFLVDNGHEWLKTLTGTGCSATTVIAAFAAVEREYPFAAAAALACFGLAAELAAPAARGPAS FKVAFYDAIYHLSADQIRAGARVTAVAG
Specific function: Thiamine biosynthesis. [C]
COG id: COG2145
COG function: function code H; Hydroxyethylthiazole kinase, sugar kinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Thz kinase family
Homologues:
Organism=Escherichia coli, GI1788421, Length=242, Percent_Identity=35.9504132231405, Blast_Score=131, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6325042, Length=276, Percent_Identity=33.3333333333333, Blast_Score=122, Evalue=6e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIM_CHLAA (A9WDL9)
Other databases:
- EMBL: CP000909 - RefSeq: YP_001634014.1 - ProteinModelPortal: A9WDL9 - SMR: A9WDL9 - GeneID: 5825778 - GenomeReviews: CP000909_GR - KEGG: cau:Caur_0375 - HOGENOM: HBG351126 - OMA: MGICGEL - ProtClustDB: PRK09355 - HAMAP: MF_00228 - InterPro: IPR000417 - PANTHER: PTHR20857:SF14 - PIRSF: PIRSF000513 - PRINTS: PR01099 - TIGRFAMs: TIGR00694
Pfam domain/function: PF02110 HK
EC number: =2.7.1.50
Molecular weight: Translated: 28200; Mature: 28069
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: BINDING 46-46 BINDING 122-122 BINDING 168-168 BINDING 195-195
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLNERIAELRERVRQQRPLIHHITNFVVMNDTANVTLHIGGLPVMAHDRAEVAEMVTAA CCHHHHHHHHHHHHHHHCCHHHHHHCEEEECCCCEEEEEECCEEEEECCHHHHHHHHHHC GALVLNVGTLSPDWIEAMLIAGRRANELGIPIVLDPVGAGATSLRTASNRRLLEELQIAV CEEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHEEEE VRGNSGEIGALAGMGGVVKGVETVVEVDDPTAAAKALAQQYRTVVAVTGRQDVVTDGKRV EECCCCCEEEECCCCHHHHHHHHEEECCCCHHHHHHHHHHHHEEEEECCCCCEECCCCEE FLVDNGHEWLKTLTGTGCSATTVIAAFAAVEREYPFAAAAALACFGLAAELAAPAARGPA EEEECCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC SFKVAFYDAIYHLSADQIRAGARVTAVAG CEEEEEEHHHHHCCHHHHHCCCEEEEECC >Mature Secondary Structure TLNERIAELRERVRQQRPLIHHITNFVVMNDTANVTLHIGGLPVMAHDRAEVAEMVTAA CHHHHHHHHHHHHHHHCCHHHHHHCEEEECCCCEEEEEECCEEEEECCHHHHHHHHHHC GALVLNVGTLSPDWIEAMLIAGRRANELGIPIVLDPVGAGATSLRTASNRRLLEELQIAV CEEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHEEEE VRGNSGEIGALAGMGGVVKGVETVVEVDDPTAAAKALAQQYRTVVAVTGRQDVVTDGKRV EECCCCCEEEECCCCHHHHHHHHEEECCCCHHHHHHHHHHHHEEEEECCCCCEECCCCEE FLVDNGHEWLKTLTGTGCSATTVIAAFAAVEREYPFAAAAALACFGLAAELAAPAARGPA EEEECCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC SFKVAFYDAIYHLSADQIRAGARVTAVAG CEEEEEEHHHHHCCHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA