| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yngG [H]
Identifier: 222523691
GI number: 222523691
Start: 470191
End: 471132
Strand: Reverse
Name: yngG [H]
Synonym: Chy400_0397
Alternate gene names: 222523691
Gene position: 471132-470191 (Counterclockwise)
Preceding gene: 222523693
Following gene: 222523690
Centisome position: 8.94
GC content: 57.64
Gene sequence:
>942_bases ATGACCACAATGACAATTGGCACGCTACCGACGTTTGTGCATATTCGTGAAGTAGGGCCGCGTGATGGTTTGCAGAATGA GCCAACGATTCTGACGACGGCGCAGAAGATAACGTTGATTGAGTTGTTGGCAGCGACCGGGTTGCGTGCGATTGAAGTAG GGGCATTTGTGCGTCCGCAACAAGTGCCGCAGATGGCCGATACGGAAGCTGTCTTTGCCGGTATCAAGCGCCAGCCTGGG GTAGTGTACAGTGCAATTGCGCCGAATGTTATCGGAGCGCGGCGGGCAATTGCCGCCGGTGCAGATGTTGTGCAGGTGTT TCTCAGCGCCAGCGAGAGCCATAATCGCAGTAATGTGAATATGAGTATCGAGCAATCACTGGTGCAGGTGGCCGAGATGG CGACGCTGGTGCATGCAGCCGGGAAGCCATTTGATGCGGTGCTGTCGGTGGCCTTCGGCTGCCCGTTTGAAGGGGATGTG CCGATTGAGCGGGTGTTGGATCTGTGTCAGCGCTTGCTCGATTTGGGTGCCGAGCAGTTGACGCTGGGTGATACCACCGG CATGGCTCACCCGCTGTTGGTGCAAGAGGTTGTCAGGGCGTTTCGCGCACGTTTTCCGCGCCAGCCCTTGCGTTTGCATT TGCACAGTGCGCGGGGGGCGGGTCTGGCAAACCTGCTGGCAGCGTTGCAATTGGGTGTCGATCTGTTTGACTCTAGCATT GGTGGTATTGGTGGTTGTCCGTTTGCGCCCGGCGCTCCTGGAAATCTCTGCACCGAAGATGTCACGCATTTGCTGCACGA GATGGGGATTGCGACCGGGTTGAATCTGCCGGCACTCATGGCGACGGCGCGTGAACTTGAACGCATGTTAGGGCACGAAG TGCCGGGACAGACGATTAAAGCCGGTATTTGTAAGCATCTGCGGGACCGCGGCGAGGGTTGA
Upstream 100 bases:
>100_bases TGCTGAGTCATACATAGTGCCGATCATGACGATTGCAGGCTGCCAACAGTGATTGCCGGCAACATGAACCGTTCAAAACC AGCAACCAGGGAGGTCGATG
Downstream 100 bases:
>100_bases ATATGGCAGGTACACATTATGGATCCGCGTGATCGGGTGGTGATTATTACCGGTGCCTCAAGTGGGATTGGGGCGGCGAC GGCTCGTTGTTTTGCGGCTG
Product: pyruvate carboxyltransferase
Products: NA
Alternate protein names: HL; HMG-CoA lyase; 3-hydroxy-3-methylglutarate-CoA lyase [H]
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MTTMTIGTLPTFVHIREVGPRDGLQNEPTILTTAQKITLIELLAATGLRAIEVGAFVRPQQVPQMADTEAVFAGIKRQPG VVYSAIAPNVIGARRAIAAGADVVQVFLSASESHNRSNVNMSIEQSLVQVAEMATLVHAAGKPFDAVLSVAFGCPFEGDV PIERVLDLCQRLLDLGAEQLTLGDTTGMAHPLLVQEVVRAFRARFPRQPLRLHLHSARGAGLANLLAALQLGVDLFDSSI GGIGGCPFAPGAPGNLCTEDVTHLLHEMGIATGLNLPALMATARELERMLGHEVPGQTIKAGICKHLRDRGEG
Sequences:
>Translated_313_residues MTTMTIGTLPTFVHIREVGPRDGLQNEPTILTTAQKITLIELLAATGLRAIEVGAFVRPQQVPQMADTEAVFAGIKRQPG VVYSAIAPNVIGARRAIAAGADVVQVFLSASESHNRSNVNMSIEQSLVQVAEMATLVHAAGKPFDAVLSVAFGCPFEGDV PIERVLDLCQRLLDLGAEQLTLGDTTGMAHPLLVQEVVRAFRARFPRQPLRLHLHSARGAGLANLLAALQLGVDLFDSSI GGIGGCPFAPGAPGNLCTEDVTHLLHEMGIATGLNLPALMATARELERMLGHEVPGQTIKAGICKHLRDRGEG >Mature_312_residues TTMTIGTLPTFVHIREVGPRDGLQNEPTILTTAQKITLIELLAATGLRAIEVGAFVRPQQVPQMADTEAVFAGIKRQPGV VYSAIAPNVIGARRAIAAGADVVQVFLSASESHNRSNVNMSIEQSLVQVAEMATLVHAAGKPFDAVLSVAFGCPFEGDVP IERVLDLCQRLLDLGAEQLTLGDTTGMAHPLLVQEVVRAFRARFPRQPLRLHLHSARGAGLANLLAALQLGVDLFDSSIG GIGGCPFAPGAPGNLCTEDVTHLLHEMGIATGLNLPALMATARELERMLGHEVPGQTIKAGICKHLRDRGEG
Specific function: Involved in the catabolism of branched amino acids such as leucine (Probable) [H]
COG id: COG0119
COG function: function code E; Isopropylmalate/homocitrate/citramalate synthases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HMG-CoA lyase family [H]
Homologues:
Organism=Homo sapiens, GI62198232, Length=305, Percent_Identity=40, Blast_Score=243, Evalue=1e-64, Organism=Homo sapiens, GI109150422, Length=278, Percent_Identity=42.4460431654676, Blast_Score=239, Evalue=2e-63, Organism=Homo sapiens, GI109150427, Length=278, Percent_Identity=42.4460431654676, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI260654708, Length=136, Percent_Identity=37.5, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17510563, Length=281, Percent_Identity=35.5871886120996, Blast_Score=192, Evalue=2e-49, Organism=Drosophila melanogaster, GI24582381, Length=280, Percent_Identity=39.6428571428571, Blast_Score=215, Evalue=4e-56,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000891 [H]
Pfam domain/function: PF00682 HMGL-like [H]
EC number: =4.1.3.4 [H]
Molecular weight: Translated: 33172; Mature: 33041
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS50991 PYR_CT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMTIGTLPTFVHIREVGPRDGLQNEPTILTTAQKITLIELLAATGLRAIEVGAFVRPQ CCEEEECCCHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHCCCCCHH QVPQMADTEAVFAGIKRQPGVVYSAIAPNVIGARRAIAAGADVVQVFLSASESHNRSNVN HCCCHHHHHHHHHHHCCCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC MSIEQSLVQVAEMATLVHAAGKPFDAVLSVAFGCPFEGDVPIERVLDLCQRLLDLGAEQL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHE TLGDTTGMAHPLLVQEVVRAFRARFPRQPLRLHLHSARGAGLANLLAALQLGVDLFDSSI ECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHCC GGIGGCPFAPGAPGNLCTEDVTHLLHEMGIATGLNLPALMATARELERMLGHEVPGQTIK CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHH AGICKHLRDRGEG HHHHHHHHHCCCC >Mature Secondary Structure TTMTIGTLPTFVHIREVGPRDGLQNEPTILTTAQKITLIELLAATGLRAIEVGAFVRPQ CEEEECCCHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHCCCCCHH QVPQMADTEAVFAGIKRQPGVVYSAIAPNVIGARRAIAAGADVVQVFLSASESHNRSNVN HCCCHHHHHHHHHHHCCCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC MSIEQSLVQVAEMATLVHAAGKPFDAVLSVAFGCPFEGDVPIERVLDLCQRLLDLGAEQL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHE TLGDTTGMAHPLLVQEVVRAFRARFPRQPLRLHLHSARGAGLANLLAALQLGVDLFDSSI ECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHCC GGIGGCPFAPGAPGNLCTEDVTHLLHEMGIATGLNLPALMATARELERMLGHEVPGQTIK CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHH AGICKHLRDRGEG HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387222; 9384377 [H]