| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222523627
Identifier: 222523627
GI number: 222523627
Start: 398419
End: 399600
Strand: Reverse
Name: 222523627
Synonym: Chy400_0333
Alternate gene names: NA
Gene position: 399600-398419 (Counterclockwise)
Preceding gene: 222523628
Following gene: 222523626
Centisome position: 7.58
GC content: 59.81
Gene sequence:
>1182_bases ATGATTGATCGGGAAGCAGTGCAGCAGATACGGGCTGATCTGGGAGCATTGCAGCCGCCGGTCCTGTCGTTGTACGTCGA GGTTGATCCAACCCGGCCCGAAAATGAGCGGCGCGCCTGGGTGTTGCGCGCACGTAATGCAGTGAAAGCCCTGGCAGTGC CGGCTGAGGTTGAACAAGTGGTACTTGCAGCTCTTGAGGCGGAGATTGCTCCGGAGGCGCGCACGCTGGCCCTGTTCGCT GCCGCGCCTGCGACCGAGCGCAAGAGCGCAACCGTCGCGGTGACGAAGGTGCCACTCCATATCACGCTGCCTTTAATCGA CATAACAAACGGAAAAGTAGAGGCGCGTTGGGGCGAACCGTACATTGCGCCTCTGATTTACGCGCTCGATCAATACGAGC GTACCGCGGTGGTCTGGTTGCGCGGTGAAGGCTGGCGTTTCTTCGAGGTCTTTCTGGGTGAGATTGTTGAGCATACCGAC GTGTTCCGGAGCGTTGAAGCCGATCTCTGGCAGCAGGTCACCGAGTTTGACCCCCGCCGACTGCGGGATGATCTACGGGC ACAGGCGATGGGCAATCGTGATCGGTTTGCCCGGCGCATGGAGAACATTGCAGCGCGCTATCTGCAACGGCTGGCCGAAC TCACCGAACGCGCACTTGATCATTTCCGCATTCGCCGACTGGTTCTGCTCGGTCGCGAAGAGGCAACCAAACAGTTTGCC GATCTGTTACCGCGTTCCGTTCGGCAGATGGTTATTGCGCATGTAGCCGATTTACCGCATCCCGATGCGTCACCAGCCCA TGTGCTGGCAAAGGTGCTGCCGGCGCTAGAGCAGGTCGAGCAGAGCCACGAACAGGCATTGCTGGAACAGGTAACGCGCC AGCCCGGTGTATGGGGGATTGATCCAACGCTCAATGCGTTGCAAGAGGGCAGGTTGAGCGTGCTGATTGCGCCATGGCAG CTCGATGCTCAGGTCTGGATGGCGTCTAATGGGTTGCTGGCCGGGAGTCGTGAACAGATTGCGACCCTGGTTCCCGATGG CGAAGCACAGCCGGTTGCATTGCGTGATGTCCTGGTTGATGCATGTGCCGCGTTTGCGACGCGGCTGGAATTTGTGTCCG GCCCTGCCCAGGATCACCTGTCACGCGATTTCGGCGGTCTGGCCGGATTGTTGCGCTGGTAA
Upstream 100 bases:
>100_bases TCATCCCGCTTGGCACGATGCTGGTGGTGAGTCTGATATTGACTGTCATCGCCAATCTGATTGCCCGCTGGTGGCGATGA TAGTCGGAAAGGAAGCGCTT
Downstream 100 bases:
>100_bases GTTGCCGGCTCACTCTCCCGGTGTGGTGTAGTGGGCATTATTGCTGCCCGCTACACCTGATTGCCGGTGTTACCCTATCA TCACAACATCATCGCACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MIDREAVQQIRADLGALQPPVLSLYVEVDPTRPENERRAWVLRARNAVKALAVPAEVEQVVLAALEAEIAPEARTLALFA AAPATERKSATVAVTKVPLHITLPLIDITNGKVEARWGEPYIAPLIYALDQYERTAVVWLRGEGWRFFEVFLGEIVEHTD VFRSVEADLWQQVTEFDPRRLRDDLRAQAMGNRDRFARRMENIAARYLQRLAELTERALDHFRIRRLVLLGREEATKQFA DLLPRSVRQMVIAHVADLPHPDASPAHVLAKVLPALEQVEQSHEQALLEQVTRQPGVWGIDPTLNALQEGRLSVLIAPWQ LDAQVWMASNGLLAGSREQIATLVPDGEAQPVALRDVLVDACAAFATRLEFVSGPAQDHLSRDFGGLAGLLRW
Sequences:
>Translated_393_residues MIDREAVQQIRADLGALQPPVLSLYVEVDPTRPENERRAWVLRARNAVKALAVPAEVEQVVLAALEAEIAPEARTLALFA AAPATERKSATVAVTKVPLHITLPLIDITNGKVEARWGEPYIAPLIYALDQYERTAVVWLRGEGWRFFEVFLGEIVEHTD VFRSVEADLWQQVTEFDPRRLRDDLRAQAMGNRDRFARRMENIAARYLQRLAELTERALDHFRIRRLVLLGREEATKQFA DLLPRSVRQMVIAHVADLPHPDASPAHVLAKVLPALEQVEQSHEQALLEQVTRQPGVWGIDPTLNALQEGRLSVLIAPWQ LDAQVWMASNGLLAGSREQIATLVPDGEAQPVALRDVLVDACAAFATRLEFVSGPAQDHLSRDFGGLAGLLRW >Mature_393_residues MIDREAVQQIRADLGALQPPVLSLYVEVDPTRPENERRAWVLRARNAVKALAVPAEVEQVVLAALEAEIAPEARTLALFA AAPATERKSATVAVTKVPLHITLPLIDITNGKVEARWGEPYIAPLIYALDQYERTAVVWLRGEGWRFFEVFLGEIVEHTD VFRSVEADLWQQVTEFDPRRLRDDLRAQAMGNRDRFARRMENIAARYLQRLAELTERALDHFRIRRLVLLGREEATKQFA DLLPRSVRQMVIAHVADLPHPDASPAHVLAKVLPALEQVEQSHEQALLEQVTRQPGVWGIDPTLNALQEGRLSVLIAPWQ LDAQVWMASNGLLAGSREQIATLVPDGEAQPVALRDVLVDACAAFATRLEFVSGPAQDHLSRDFGGLAGLLRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43958; Mature: 43958
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDREAVQQIRADLGALQPPVLSLYVEVDPTRPENERRAWVLRARNAVKALAVPAEVEQV CCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH VLAALEAEIAPEARTLALFAAAPATERKSATVAVTKVPLHITLPLIDITNGKVEARWGEP HHHHHHHHCCCCHHEEEEEEECCCCCCCCCEEEEEEEEEEEEEEEEEECCCEEEEECCCC YIAPLIYALDQYERTAVVWLRGEGWRFFEVFLGEIVEHTDVFRSVEADLWQQVTEFDPRR HHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LRDDLRAQAMGNRDRFARRMENIAARYLQRLAELTERALDHFRIRRLVLLGREEATKQFA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH DLLPRSVRQMVIAHVADLPHPDASPAHVLAKVLPALEQVEQSHEQALLEQVTRQPGVWGI HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DPTLNALQEGRLSVLIAPWQLDAQVWMASNGLLAGSREQIATLVPDGEAQPVALRDVLVD CHHHHHHHCCCEEEEEECEEECCEEEEECCCCCCCCHHHHEEECCCCCCCCHHHHHHHHH ACAAFATRLEFVSGPAQDHLSRDFGGLAGLLRW HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIDREAVQQIRADLGALQPPVLSLYVEVDPTRPENERRAWVLRARNAVKALAVPAEVEQV CCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH VLAALEAEIAPEARTLALFAAAPATERKSATVAVTKVPLHITLPLIDITNGKVEARWGEP HHHHHHHHCCCCHHEEEEEEECCCCCCCCCEEEEEEEEEEEEEEEEEECCCEEEEECCCC YIAPLIYALDQYERTAVVWLRGEGWRFFEVFLGEIVEHTDVFRSVEADLWQQVTEFDPRR HHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LRDDLRAQAMGNRDRFARRMENIAARYLQRLAELTERALDHFRIRRLVLLGREEATKQFA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH DLLPRSVRQMVIAHVADLPHPDASPAHVLAKVLPALEQVEQSHEQALLEQVTRQPGVWGI HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DPTLNALQEGRLSVLIAPWQLDAQVWMASNGLLAGSREQIATLVPDGEAQPVALRDVLVD CHHHHHHHCCCEEEEEECEEECCEEEEECCCCCCCCHHHHEEECCCCCCCCHHHHHHHHH ACAAFATRLEFVSGPAQDHLSRDFGGLAGLLRW HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA