| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222523614
Identifier: 222523614
GI number: 222523614
Start: 383150
End: 384136
Strand: Direct
Name: 222523614
Synonym: Chy400_0320
Alternate gene names: NA
Gene position: 383150-384136 (Clockwise)
Preceding gene: 222523613
Following gene: 222523615
Centisome position: 7.27
GC content: 56.53
Gene sequence:
>987_bases ATGTGGGACTTCAGCATCGGCAAGGCTTTCAGTTTGCTCATCCGCACCACGCCGTTTATCGGCTTCCGTTTCGCCATCTA CTTTGGGATTACCCTCGCCTACATCGTGGCAACCGGTGGTGGCGCCGGTATCGGATACCTGATCGGCAGCGTCCTTGGCG ATGCCGAGACCGCAGGTGGCAGTGCATTTTGGGGCGGATTGTTCGGCTTTGGGTTCGTGTCGGGCGCGTTGTACTTTGCC CGTGAGTATCTGATGTACATTGTCAAAGCGGGGCATATTGCAGTACTGGTACGCCTGATGGATGACCAACCCATACCGGA AGGAACGGGGCAGATCGCGTATGCCTCTCAGATCGTGAAAGCGCGTTTCGCCGAAGCCTCACTGCTCTTTGGCCTCGATC AGCTCATCAAAGGTATCATCCGCACCGTGAACAGCACGCTGCTGACTATCAGCAGTTTTCTGCCCATCCCAGGACTAACC AACGCCATGGAGTTTGTGACAGCCGTGATCAGATTCTCGCTGACGTATGTAGACGAGGCCATTCTCGCCTACATCATCCG CACCGATCAAGCGAATAGCTGGGCCAGCGCTCGTGACGGCGTGATCCTGTACGCCCAAAACTACCGGCTGCTGCTCAAAA ATGCGGTCTTCCTCACCATCTTTGCCTGGATATTGTCCTTTGTGATTTTCCTGATCGTGATTGCACCGGTTGCCGCACTT GTGAGCGTGATGCCGGGTTTGGGTGGGTTCTGGACGCTGATCATCGCCATCATCACCGCGTATGCGCTGAAAGCAGCGCT AATTGACCCCTTTGCCATGGCGTGTATTGTCCAGGTCTACTTCCAGGCCATCGCAGGCCAGACACCGAGTCCGGAATGGG TCGACCGCCTGAATTCGCTCTCAGCCCAGTTTCGGGAGTTAGGCGAAAAGGCCGCAGCCGCGATGGGCGGCAGCAGTCGT CTGCCCATCTCAACCTGGAAAGGCTGA
Upstream 100 bases:
>100_bases CTGGTCAAATCGCGGGACTCCAGCGATACCGGCGTAACCGAGATCGTGCTGCTTTCCTATTCCATCCCCTGAGATGCATT CAACGAGAGGAGCAAAGACC
Downstream 100 bases:
>100_bases CAACAGACGATTGATCGCAGGCTACCAGATACGCTATCGGCGCCTCACGATGTTCGTCGCGCTGACCGTTGCGCGGCGCA GGGGATGTCCTCGAATTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MWDFSIGKAFSLLIRTTPFIGFRFAIYFGITLAYIVATGGGAGIGYLIGSVLGDAETAGGSAFWGGLFGFGFVSGALYFA REYLMYIVKAGHIAVLVRLMDDQPIPEGTGQIAYASQIVKARFAEASLLFGLDQLIKGIIRTVNSTLLTISSFLPIPGLT NAMEFVTAVIRFSLTYVDEAILAYIIRTDQANSWASARDGVILYAQNYRLLLKNAVFLTIFAWILSFVIFLIVIAPVAAL VSVMPGLGGFWTLIIAIITAYALKAALIDPFAMACIVQVYFQAIAGQTPSPEWVDRLNSLSAQFRELGEKAAAAMGGSSR LPISTWKG
Sequences:
>Translated_328_residues MWDFSIGKAFSLLIRTTPFIGFRFAIYFGITLAYIVATGGGAGIGYLIGSVLGDAETAGGSAFWGGLFGFGFVSGALYFA REYLMYIVKAGHIAVLVRLMDDQPIPEGTGQIAYASQIVKARFAEASLLFGLDQLIKGIIRTVNSTLLTISSFLPIPGLT NAMEFVTAVIRFSLTYVDEAILAYIIRTDQANSWASARDGVILYAQNYRLLLKNAVFLTIFAWILSFVIFLIVIAPVAAL VSVMPGLGGFWTLIIAIITAYALKAALIDPFAMACIVQVYFQAIAGQTPSPEWVDRLNSLSAQFRELGEKAAAAMGGSSR LPISTWKG >Mature_328_residues MWDFSIGKAFSLLIRTTPFIGFRFAIYFGITLAYIVATGGGAGIGYLIGSVLGDAETAGGSAFWGGLFGFGFVSGALYFA REYLMYIVKAGHIAVLVRLMDDQPIPEGTGQIAYASQIVKARFAEASLLFGLDQLIKGIIRTVNSTLLTISSFLPIPGLT NAMEFVTAVIRFSLTYVDEAILAYIIRTDQANSWASARDGVILYAQNYRLLLKNAVFLTIFAWILSFVIFLIVIAPVAAL VSVMPGLGGFWTLIIAIITAYALKAALIDPFAMACIVQVYFQAIAGQTPSPEWVDRLNSLSAQFRELGEKAAAAMGGSSR LPISTWKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35368; Mature: 35368
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWDFSIGKAFSLLIRTTPFIGFRFAIYFGITLAYIVATGGGAGIGYLIGSVLGDAETAGG CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC SAFWGGLFGFGFVSGALYFAREYLMYIVKAGHIAVLVRLMDDQPIPEGTGQIAYASQIVK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH ARFAEASLLFGLDQLIKGIIRTVNSTLLTISSFLPIPGLTNAMEFVTAVIRFSLTYVDEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH ILAYIIRTDQANSWASARDGVILYAQNYRLLLKNAVFLTIFAWILSFVIFLIVIAPVAAL HHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSVMPGLGGFWTLIIAIITAYALKAALIDPFAMACIVQVYFQAIAGQTPSPEWVDRLNSL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH SAQFRELGEKAAAAMGGSSRLPISTWKG HHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MWDFSIGKAFSLLIRTTPFIGFRFAIYFGITLAYIVATGGGAGIGYLIGSVLGDAETAGG CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCC SAFWGGLFGFGFVSGALYFAREYLMYIVKAGHIAVLVRLMDDQPIPEGTGQIAYASQIVK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH ARFAEASLLFGLDQLIKGIIRTVNSTLLTISSFLPIPGLTNAMEFVTAVIRFSLTYVDEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH ILAYIIRTDQANSWASARDGVILYAQNYRLLLKNAVFLTIFAWILSFVIFLIVIAPVAAL HHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSVMPGLGGFWTLIIAIITAYALKAALIDPFAMACIVQVYFQAIAGQTPSPEWVDRLNSL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH SAQFRELGEKAAAAMGGSSRLPISTWKG HHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA