Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222523613

Identifier: 222523613

GI number: 222523613

Start: 382213

End: 383121

Strand: Direct

Name: 222523613

Synonym: Chy400_0319

Alternate gene names: NA

Gene position: 382213-383121 (Clockwise)

Preceding gene: 222523612

Following gene: 222523614

Centisome position: 7.25

GC content: 60.18

Gene sequence:

>909_bases
ATGCCCATCACTCGTTTCGTCCTGATTGCAGTGATCCTGGCTTTGTCCGCCTGCTCGTCAGGCGGCAGTTCGACGGTTGA
ACCGTCACCGGTGGCGGTGAACCCCACTCCGACCGTTCAACCGTCGCCGGTGGCGGAGAACCCCACTCCGACCGTTCAAC
CGTCGCCGGTGGCAGCGAACCCCTCTCCGACCGTTCAACCCTCACCGGTGGTAGAGAACCCCACTCCGACCGTTCAACCC
TCACCGGTGGCAGAGAACCCCACTGCACCTGTTCCGCCTGTGGCTGCCGCCGGTCAGTGCCAGAACCCCTACTACCCCGT
AGTTCAGGGCGCTACCTGGCAATACCAGATCAGCGGCGCGAGCAGCGATACGTTCGTGCGGACAATCACCCAGGTTCGCG
AAGACGGCTTCGACGATCAGGATGTGTTCAGCAGCGGCGCTACCCGCCAGGGAAGCTGGCAATGTCAGCAAGGCAATCTC
ATCGGTCTGTCAGCCGGTTCCAACCCCAGCGTCGCTCTCTCGGACCAGATGAACTTCACGTTTACGGTGGAGTCCAATAC
CGGCATCTCATTCCCCGCCGATCCTCAGCCAGGCGCTGAATGGACGCAGACCATTGTCTATGGCGGTCAATCTGATATTG
GCGGCACAACCGTAGCATTGCGCAACACGATGCAGTTGTCGTGCAAAGCCATCGGAGTGGAACGGGTGAGCGTGCCCGTC
GGCAACCTCGAAGCCTTGCGAGTTGACTGCACAACCAGGTTTGACATCTCGTTCGCAGGTGCTACAGCGTTGAGTACGAC
TACAACTGGTTCTGCCTGGTATGCGTCAGGGGTGGGTCTGGTCAAATCGCGGGACTCCAGCGATACCGGCGTAACCGAGA
TCGTGCTGCTTTCCTATTCCATCCCCTGA

Upstream 100 bases:

>100_bases
TTCTGACGAACAGGCGATGAGGTGGTTACTGTCGATGAGCAAACCACCAGGCATTGATCTACCGTCATCCTTATGATCGC
TTGTGCAAGGGAGATATACA

Downstream 100 bases:

>100_bases
GATGCATTCAACGAGAGGAGCAAAGACCATGTGGGACTTCAGCATCGGCAAGGCTTTCAGTTTGCTCATCCGCACCACGC
CGTTTATCGGCTTCCGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MPITRFVLIAVILALSACSSGGSSTVEPSPVAVNPTPTVQPSPVAENPTPTVQPSPVAANPSPTVQPSPVVENPTPTVQP
SPVAENPTAPVPPVAAAGQCQNPYYPVVQGATWQYQISGASSDTFVRTITQVREDGFDDQDVFSSGATRQGSWQCQQGNL
IGLSAGSNPSVALSDQMNFTFTVESNTGISFPADPQPGAEWTQTIVYGGQSDIGGTTVALRNTMQLSCKAIGVERVSVPV
GNLEALRVDCTTRFDISFAGATALSTTTTGSAWYASGVGLVKSRDSSDTGVTEIVLLSYSIP

Sequences:

>Translated_302_residues
MPITRFVLIAVILALSACSSGGSSTVEPSPVAVNPTPTVQPSPVAENPTPTVQPSPVAANPSPTVQPSPVVENPTPTVQP
SPVAENPTAPVPPVAAAGQCQNPYYPVVQGATWQYQISGASSDTFVRTITQVREDGFDDQDVFSSGATRQGSWQCQQGNL
IGLSAGSNPSVALSDQMNFTFTVESNTGISFPADPQPGAEWTQTIVYGGQSDIGGTTVALRNTMQLSCKAIGVERVSVPV
GNLEALRVDCTTRFDISFAGATALSTTTTGSAWYASGVGLVKSRDSSDTGVTEIVLLSYSIP
>Mature_301_residues
PITRFVLIAVILALSACSSGGSSTVEPSPVAVNPTPTVQPSPVAENPTPTVQPSPVAANPSPTVQPSPVVENPTPTVQPS
PVAENPTAPVPPVAAAGQCQNPYYPVVQGATWQYQISGASSDTFVRTITQVREDGFDDQDVFSSGATRQGSWQCQQGNLI
GLSAGSNPSVALSDQMNFTFTVESNTGISFPADPQPGAEWTQTIVYGGQSDIGGTTVALRNTMQLSCKAIGVERVSVPVG
NLEALRVDCTTRFDISFAGATALSTTTTGSAWYASGVGLVKSRDSSDTGVTEIVLLSYSIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31250; Mature: 31119

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPITRFVLIAVILALSACSSGGSSTVEPSPVAVNPTPTVQPSPVAENPTPTVQPSPVAAN
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PSPTVQPSPVVENPTPTVQPSPVAENPTAPVPPVAAAGQCQNPYYPVVQGATWQYQISGA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEECCC
SSDTFVRTITQVREDGFDDQDVFSSGATRQGSWQCQQGNLIGLSAGSNPSVALSDQMNFT
CCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEECCCCEEEEECCCCCCEEEECCCEEE
FTVESNTGISFPADPQPGAEWTQTIVYGGQSDIGGTTVALRNTMQLSCKAIGVERVSVPV
EEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCEEEEEEEECEEEEEECC
GNLEALRVDCTTRFDISFAGATALSTTTTGSAWYASGVGLVKSRDSSDTGVTEIVLLSYS
CCEEEEEEEEEEEEEEEECCCEEEEECCCCCCEEECCCCEEECCCCCCCCCEEEEEEEEC
IP
CC
>Mature Secondary Structure 
PITRFVLIAVILALSACSSGGSSTVEPSPVAVNPTPTVQPSPVAENPTPTVQPSPVAAN
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PSPTVQPSPVVENPTPTVQPSPVAENPTAPVPPVAAAGQCQNPYYPVVQGATWQYQISGA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEECCC
SSDTFVRTITQVREDGFDDQDVFSSGATRQGSWQCQQGNLIGLSAGSNPSVALSDQMNFT
CCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEECCCCEEEEECCCCCCEEEECCCEEE
FTVESNTGISFPADPQPGAEWTQTIVYGGQSDIGGTTVALRNTMQLSCKAIGVERVSVPV
EEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCEEEEEEEECEEEEEECC
GNLEALRVDCTTRFDISFAGATALSTTTTGSAWYASGVGLVKSRDSSDTGVTEIVLLSYS
CCEEEEEEEEEEEEEEEECCCEEEEECCCCCCEEECCCCEEECCCCCCCCCEEEEEEEEC
IP
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA