| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523590
Identifier: 222523590
GI number: 222523590
Start: 358263
End: 358631
Strand: Reverse
Name: 222523590
Synonym: Chy400_0296
Alternate gene names: NA
Gene position: 358631-358263 (Counterclockwise)
Preceding gene: 222523591
Following gene: 222523589
Centisome position: 6.81
GC content: 60.16
Gene sequence:
>369_bases ATGGCAAGCAGAACCGAAGAGATGGTGCGGCATCTAAAGGCCCTATCGATGAACACGCCCGACATTGAGGCCTCCGCCGT GGTAAGCGTCGACGGCCTCATCATGGCTTCGGCGCTGCCGGCAGATGTCGAAGAAGATCGTGTCTCGGCGATGAGCGCGG CAATGCTCTCGCTGGGTGAGCGAATCGCAAGCGAGCTGCGGCGCGGGCAACTCGATCAGGTCTTTGTGCGTGGGGAAGAT GGCTACGTTATCCTGATGGCAATTGGTGAGGAAGCAGTGTTGACTGCGCTGGCGCAGAGCCGGGCCAAGCTGGGTCTGGT CTTCCTTGATATGCGGCGCACGGCGAACGAGCTGGTCAATCTCGTCTAG
Upstream 100 bases:
>100_bases GCCGTCGTGATGTTAGTTCTGCACTTATTAGCTAATTGTTCAGGCCCACACGGTTTCGTTCCTGTCCCGAACTGGCTGAC GGCCTCTAAGGAGGATATGA
Downstream 100 bases:
>100_bases CCATTGCTCGCTCAGCCAGCCCGGGAAGATGCTCATGCAGCCCGCTTACTGGCGGGCTGTTTGTGTCTTGTTAGCCGCTA CGACTGCTCGTCGTAGATGA
Product: Roadblock/LC7 family protein
Products: NA
Alternate protein names: Roadblock/LC7 Domain Superfamily; Carboxy- Peptidase; Roadblock/LC7 Domain-Contain Protein; Roadblock/LC7 Domain Protein; Ras-Like GTPase Activity Regulator; Roadblock/LC7 Domain Family; Roadblock/LC7 Domain-Containing Protein
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MASRTEEMVRHLKALSMNTPDIEASAVVSVDGLIMASALPADVEEDRVSAMSAAMLSLGERIASELRRGQLDQVFVRGED GYVILMAIGEEAVLTALAQSRAKLGLVFLDMRRTANELVNLV
Sequences:
>Translated_122_residues MASRTEEMVRHLKALSMNTPDIEASAVVSVDGLIMASALPADVEEDRVSAMSAAMLSLGERIASELRRGQLDQVFVRGED GYVILMAIGEEAVLTALAQSRAKLGLVFLDMRRTANELVNLV >Mature_121_residues ASRTEEMVRHLKALSMNTPDIEASAVVSVDGLIMASALPADVEEDRVSAMSAAMLSLGERIASELRRGQLDQVFVRGEDG YVILMAIGEEAVLTALAQSRAKLGLVFLDMRRTANELVNLV
Specific function: Unknown
COG id: COG2018
COG function: function code R; Uncharacterized distant relative of homeotic protein bithoraxoid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13175; Mature: 13044
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRTEEMVRHLKALSMNTPDIEASAVVSVDGLIMASALPADVEEDRVSAMSAAMLSLGE CCCHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH RIASELRRGQLDQVFVRGEDGYVILMAIGEEAVLTALAQSRAKLGLVFLDMRRTANELVN HHHHHHHHCCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LV CC >Mature Secondary Structure ASRTEEMVRHLKALSMNTPDIEASAVVSVDGLIMASALPADVEEDRVSAMSAAMLSLGE CCHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH RIASELRRGQLDQVFVRGEDGYVILMAIGEEAVLTALAQSRAKLGLVFLDMRRTANELVN HHHHHHHHCCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LV CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA