| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523587
Identifier: 222523587
GI number: 222523587
Start: 355532
End: 356479
Strand: Direct
Name: 222523587
Synonym: Chy400_0293
Alternate gene names: NA
Gene position: 355532-356479 (Clockwise)
Preceding gene: 222523586
Following gene: 222523588
Centisome position: 6.75
GC content: 55.59
Gene sequence:
>948_bases ATGAATTGTCCACAGTGCGGCGCTCCGGTAGCTCCAAACGCTCGCTTTTGTACGAATTGTGGCGCTCGCCTGACACCAGC AGCCGCAGCACCATCTTCATTTATTCCGCCGTCAGGTGAGTCGGTCAGTATGGCTGATGTGTACGATAATCGCCCCGGTG AACGCCTCGATCTCCCTGAACCAACCATTGTCGGTACCGGTGTCGGCGCAAGCGGCTTGCGTTACAAAATCATTGGTACG ACCATGCAGGCCGTTGTGCTTGAAGTTCCCGCCGGACAAACGATCTTCTCAGAGCGCGGCGGCATGAGCTGGATGAGTGC CAACGTGCAGATGCAGACAAATATGGAAGGCGGCCTGGGTGGTGCATTTAAGCGCATGTTCTCTGGTGAGTCGATCTTTA TGGTCAACTTTACGCCGCAGGGCGGGCCGGGCATCATCGGTTTTTCGGCAGAGCTGCCGGGCAAAATTGTGCCACTGAAT CTGGCACCGGGCCAGACGATGATTTGCCAGAAAGACTCATTCATGTGCGCCGAACGGAGTGTATCCCTCGATATCCACTT CCGGCGTAAGCTCGGTGCAGGGTTCTTCGGTGGTGAAGGTTTTATCATGCAAAAGCTGACCGGGCCAGGGCTGGCGTTCG TAGAACTGGATGGCGAGGTCGTTGAATACACGCTCGAAGCCAACCAGATGCTCAAAGTAGATACCGGTCACGTGGCGATG TATGAGCCAACGATCAACTTCGATGTCGAGATGGTGCGCGGGTTCAAGAACATTCTCTTCGGTGGCGAAGGCCTATTCCT CACGACACTACGCGGGCCGGGTCGGGTCTGGCTCCAGACCATGCCGGCGATGAATCTGGCGAAGAAACTGGCTCAATACA TGCCGACAACGAGCAGTTCCAGCGGTAGCGGTGGGATCAATCTCGGCAATCTCTTTACAAACGATTGA
Upstream 100 bases:
>100_bases CAGACCCTTAGTAAGAGTTAGGCTGATGCAACTTTGGTTCACTGATATACGTACAGTATTGCGCCTGGTATGATACATCT GGTAACAGGAGGTCTCGGTT
Downstream 100 bases:
>100_bases GGACGGTAGATCTCTGGAGCACAACGGGAGGAGTATCAGCTTGATGCTCCTCCCGTTGTTGTGGGCAACGTGCAAGGCAA CTGGAGATGCACGTGTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MNCPQCGAPVAPNARFCTNCGARLTPAAAAPSSFIPPSGESVSMADVYDNRPGERLDLPEPTIVGTGVGASGLRYKIIGT TMQAVVLEVPAGQTIFSERGGMSWMSANVQMQTNMEGGLGGAFKRMFSGESIFMVNFTPQGGPGIIGFSAELPGKIVPLN LAPGQTMICQKDSFMCAERSVSLDIHFRRKLGAGFFGGEGFIMQKLTGPGLAFVELDGEVVEYTLEANQMLKVDTGHVAM YEPTINFDVEMVRGFKNILFGGEGLFLTTLRGPGRVWLQTMPAMNLAKKLAQYMPTTSSSSGSGGINLGNLFTND
Sequences:
>Translated_315_residues MNCPQCGAPVAPNARFCTNCGARLTPAAAAPSSFIPPSGESVSMADVYDNRPGERLDLPEPTIVGTGVGASGLRYKIIGT TMQAVVLEVPAGQTIFSERGGMSWMSANVQMQTNMEGGLGGAFKRMFSGESIFMVNFTPQGGPGIIGFSAELPGKIVPLN LAPGQTMICQKDSFMCAERSVSLDIHFRRKLGAGFFGGEGFIMQKLTGPGLAFVELDGEVVEYTLEANQMLKVDTGHVAM YEPTINFDVEMVRGFKNILFGGEGLFLTTLRGPGRVWLQTMPAMNLAKKLAQYMPTTSSSSGSGGINLGNLFTND >Mature_315_residues MNCPQCGAPVAPNARFCTNCGARLTPAAAAPSSFIPPSGESVSMADVYDNRPGERLDLPEPTIVGTGVGASGLRYKIIGT TMQAVVLEVPAGQTIFSERGGMSWMSANVQMQTNMEGGLGGAFKRMFSGESIFMVNFTPQGGPGIIGFSAELPGKIVPLN LAPGQTMICQKDSFMCAERSVSLDIHFRRKLGAGFFGGEGFIMQKLTGPGLAFVELDGEVVEYTLEANQMLKVDTGHVAM YEPTINFDVEMVRGFKNILFGGEGLFLTTLRGPGRVWLQTMPAMNLAKKLAQYMPTTSSSSGSGGINLGNLFTND
Specific function: Unknown
COG id: COG2013
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002838 - InterPro: IPR016031 [H]
Pfam domain/function: PF01987 DUF124 [H]
EC number: NA
Molecular weight: Translated: 33464; Mature: 33464
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCPQCGAPVAPNARFCTNCGARLTPAAAAPSSFIPPSGESVSMADVYDNRPGERLDLPE CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCC PTIVGTGVGASGLRYKIIGTTMQAVVLEVPAGQTIFSERGGMSWMSANVQMQTNMEGGLG CEEEECCCCCCCCEEEEECCEEEEEEEECCCCCEEHHCCCCCEEEEECEEEEECCCCCCC GAFKRMFSGESIFMVNFTPQGGPGIIGFSAELPGKIVPLNLAPGQTMICQKDSFMCAERS HHHHHHHCCCEEEEEEECCCCCCEEEEECCCCCCEEEEEEECCCCEEEEECCCCEEECCC VSLDIHFRRKLGAGFFGGEGFIMQKLTGPGLAFVELDGEVVEYTLEANQMLKVDTGHVAM EEEEEEEEHHCCCCEECCCCEEEEEECCCCEEEEEECCEEEEEEECCCEEEEEECCCEEE YEPTINFDVEMVRGFKNILFGGEGLFLTTLRGPGRVWLQTMPAMNLAKKLAQYMPTTSSS ECCCCCCCHHHHHHHHHHEECCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCCCC SGSGGINLGNLFTND CCCCCEEECCEECCC >Mature Secondary Structure MNCPQCGAPVAPNARFCTNCGARLTPAAAAPSSFIPPSGESVSMADVYDNRPGERLDLPE CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCCCCCCCCCCCC PTIVGTGVGASGLRYKIIGTTMQAVVLEVPAGQTIFSERGGMSWMSANVQMQTNMEGGLG CEEEECCCCCCCCEEEEECCEEEEEEEECCCCCEEHHCCCCCEEEEECEEEEECCCCCCC GAFKRMFSGESIFMVNFTPQGGPGIIGFSAELPGKIVPLNLAPGQTMICQKDSFMCAERS HHHHHHHCCCEEEEEEECCCCCCEEEEECCCCCCEEEEEEECCCCEEEEECCCCEEECCC VSLDIHFRRKLGAGFFGGEGFIMQKLTGPGLAFVELDGEVVEYTLEANQMLKVDTGHVAM EEEEEEEEHHCCCCEECCCCEEEEEECCCCEEEEEECCEEEEEEECCCEEEEEECCCEEE YEPTINFDVEMVRGFKNILFGGEGLFLTTLRGPGRVWLQTMPAMNLAKKLAQYMPTTSSS ECCCCCCCHHHHHHHHHHEECCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCCCC SGSGGINLGNLFTND CCCCCEEECCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA