| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222523565
Identifier: 222523565
GI number: 222523565
Start: 328472
End: 329266
Strand: Reverse
Name: 222523565
Synonym: Chy400_0271
Alternate gene names: NA
Gene position: 329266-328472 (Counterclockwise)
Preceding gene: 222523566
Following gene: 222523564
Centisome position: 6.25
GC content: 58.74
Gene sequence:
>795_bases ATGACCCTGCCGGCAATCTTCTTAATTGTTACACTGATCTTCGTTGTCGCTCTGGTCTGGCTACATCATGCCCGTGCGCT CTCTGGTCGTTTACCGGAACGTCGCTCGTTACCCGCCCTTGATATGCTGCGCTCTGCTCTTGCGCGCAGTGCCGAAACTG GACGACCGGTTCATCTCTCGCCAGGGGCAAGCACCATTGGTGCCGGAGAAGGACAACGGGCCAGTACAGCCGAGCTGTTG GCCGGTCTGAGTATGATAGGCCAGGCCGCCAGTCAGGCTGCGGCTGGCGGGGCAGCGATTGAGGTCAGTTCGGCTGATGC AGTCGCCCATTTAGCCTTGCGCGGGGTGGTACGGCAGGCTTATCAAACGTTGGGGCAGTCTCAGTCGTTTGATCCGCGCC AGATTGAGTTGTGGGCGCATGCTGATGCGATGGCATACGCGACTGCTGTTGCGGCACATTATCGCCAGGCGCAACTGGAA GCCAGTGTGCTCAGCGGGGCATTTGGGCAAGAGGTGTTGCTGGCGGCTGAAACCGGCGCTCAGCGGGCGATACCACAGGT GCTGGGCAGTACGCACCCATCGGCACTGGGATTGATGATCATTACAACGCCGCATGTACTGGCCGGCGAAGAGCTGTACG CTGCTGAAGCACATCTCACGACTGCACCTGCCCCACAGGCCCGGTTACTTACTCACGATACACTGCGCACAATAGTCATC TGGCTTATGTTGATAGCTTTCGGATACGGTCTGATCCGGGTAGCATTTGGATGGCCGGCTTTACCGGGATGGTGA
Upstream 100 bases:
>100_bases AAATAATTGACAAACCCGATCTCGTGGGTTAAACTCAATAAGAAATTGGTCATTAGCCTGTAAAAGATTGCTTGTTGGCG GAAGGAAGGAACTGATATTC
Downstream 100 bases:
>100_bases GGTAATGTCATCTCCGTTGCGCAATCCACGTCAGCTTATCACTGTGTTAATTGCCGGGGTTAGCGGCCTGATTGTGCTGC TCGATTTTGTCGGTGCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTLPAIFLIVTLIFVVALVWLHHARALSGRLPERRSLPALDMLRSALARSAETGRPVHLSPGASTIGAGEGQRASTAELL AGLSMIGQAASQAAAGGAAIEVSSADAVAHLALRGVVRQAYQTLGQSQSFDPRQIELWAHADAMAYATAVAAHYRQAQLE ASVLSGAFGQEVLLAAETGAQRAIPQVLGSTHPSALGLMIITTPHVLAGEELYAAEAHLTTAPAPQARLLTHDTLRTIVI WLMLIAFGYGLIRVAFGWPALPGW
Sequences:
>Translated_264_residues MTLPAIFLIVTLIFVVALVWLHHARALSGRLPERRSLPALDMLRSALARSAETGRPVHLSPGASTIGAGEGQRASTAELL AGLSMIGQAASQAAAGGAAIEVSSADAVAHLALRGVVRQAYQTLGQSQSFDPRQIELWAHADAMAYATAVAAHYRQAQLE ASVLSGAFGQEVLLAAETGAQRAIPQVLGSTHPSALGLMIITTPHVLAGEELYAAEAHLTTAPAPQARLLTHDTLRTIVI WLMLIAFGYGLIRVAFGWPALPGW >Mature_263_residues TLPAIFLIVTLIFVVALVWLHHARALSGRLPERRSLPALDMLRSALARSAETGRPVHLSPGASTIGAGEGQRASTAELLA GLSMIGQAASQAAAGGAAIEVSSADAVAHLALRGVVRQAYQTLGQSQSFDPRQIELWAHADAMAYATAVAAHYRQAQLEA SVLSGAFGQEVLLAAETGAQRAIPQVLGSTHPSALGLMIITTPHVLAGEELYAAEAHLTTAPAPQARLLTHDTLRTIVIW LMLIAFGYGLIRVAFGWPALPGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27709; Mature: 27578
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPAIFLIVTLIFVVALVWLHHARALSGRLPERRSLPALDMLRSALARSAETGRPVHLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEC PGASTIGAGEGQRASTAELLAGLSMIGQAASQAAAGGAAIEVSSADAVAHLALRGVVRQA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHH YQTLGQSQSFDPRQIELWAHADAMAYATAVAAHYRQAQLEASVLSGAFGQEVLLAAETGA HHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCH QRAIPQVLGSTHPSALGLMIITTPHVLAGEELYAAEAHLTTAPAPQARLLTHDTLRTIVI HHHHHHHHCCCCCHHHEEEEEECCCHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH WLMLIAFGYGLIRVAFGWPALPGW HHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TLPAIFLIVTLIFVVALVWLHHARALSGRLPERRSLPALDMLRSALARSAETGRPVHLS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEC PGASTIGAGEGQRASTAELLAGLSMIGQAASQAAAGGAAIEVSSADAVAHLALRGVVRQA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHH YQTLGQSQSFDPRQIELWAHADAMAYATAVAAHYRQAQLEASVLSGAFGQEVLLAAETGA HHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCH QRAIPQVLGSTHPSALGLMIITTPHVLAGEELYAAEAHLTTAPAPQARLLTHDTLRTIVI HHHHHHHHCCCCCHHHEEEEEECCCHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH WLMLIAFGYGLIRVAFGWPALPGW HHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA