Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222523564

Identifier: 222523564

GI number: 222523564

Start: 327799

End: 328467

Strand: Reverse

Name: 222523564

Synonym: Chy400_0270

Alternate gene names: NA

Gene position: 328467-327799 (Counterclockwise)

Preceding gene: 222523565

Following gene: 222523563

Centisome position: 6.23

GC content: 53.66

Gene sequence:

>669_bases
ATGTCATCTCCGTTGCGCAATCCACGTCAGCTTATCACTGTGTTAATTGCCGGGGTTAGCGGCCTGATTGTGCTGCTCGA
TTTTGTCGGTGCTGGCCCGGCAGTAAGTACGATAGCTGTCGTTTTGGTGCGCTGGGCAGCATTGATAACAGCGATTGCGG
TTGCAATTGGCGTGTTAAGTGTGTTTTTCGTTCATCTACGTCGTGCTCGTAGCCGATCAGCGGAGGCCGGGTACAGCCTC
GTGCTTCTGGCCGGTATGATCGTGGTGATTGTGGCTGGAATCTTCTACCCAACCCGTACTGCAACCGGTTTGTCGTTACC
GACAACTCTGGCTGATCCACCGATCCGTACTGTTTTTCGTCTGATTTATGAACCGTTAGCCGCCAGTCTGTTAGCGCTGC
TTTCGTTTTTTGCACTCAGTGCCATGTTGCGCGCAATGCGTAGTGGCCGCATCGAGGCTGTGTTTGTGGTAGCTGTGGCG
CTTATAGCGTTGATTATTCAGTTGCCACCATTAACTCTCGTGCCAATAATTGGGCAGACGGTACAATGGGTGAATGACTA
TCTGGTTGCGGCTGGAGCGCGCGGTCTGCTGCTTGGCTCGGCGATTGGGGCGCTGGTGGCCGGAGTCCGTCTGCTAATTG
GTTTTGATATGCCGTATGCCGACCGTTGA

Upstream 100 bases:

>100_bases
ACACTGCGCACAATAGTCATCTGGCTTATGTTGATAGCTTTCGGATACGGTCTGATCCGGGTAGCATTTGGATGGCCGGC
TTTACCGGGATGGTGAGGTA

Downstream 100 bases:

>100_bases
TCCGGTTGGGTAGCGGCACCCGAATGTCTATGGAACACCTACCACCGTGGTTGCGTAATGTACCCTTGCCTCCACCGCCA
ACCGACGCCGCTGATGAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSSPLRNPRQLITVLIAGVSGLIVLLDFVGAGPAVSTIAVVLVRWAALITAIAVAIGVLSVFFVHLRRARSRSAEAGYSL
VLLAGMIVVIVAGIFYPTRTATGLSLPTTLADPPIRTVFRLIYEPLAASLLALLSFFALSAMLRAMRSGRIEAVFVVAVA
LIALIIQLPPLTLVPIIGQTVQWVNDYLVAAGARGLLLGSAIGALVAGVRLLIGFDMPYADR

Sequences:

>Translated_222_residues
MSSPLRNPRQLITVLIAGVSGLIVLLDFVGAGPAVSTIAVVLVRWAALITAIAVAIGVLSVFFVHLRRARSRSAEAGYSL
VLLAGMIVVIVAGIFYPTRTATGLSLPTTLADPPIRTVFRLIYEPLAASLLALLSFFALSAMLRAMRSGRIEAVFVVAVA
LIALIIQLPPLTLVPIIGQTVQWVNDYLVAAGARGLLLGSAIGALVAGVRLLIGFDMPYADR
>Mature_221_residues
SSPLRNPRQLITVLIAGVSGLIVLLDFVGAGPAVSTIAVVLVRWAALITAIAVAIGVLSVFFVHLRRARSRSAEAGYSLV
LLAGMIVVIVAGIFYPTRTATGLSLPTTLADPPIRTVFRLIYEPLAASLLALLSFFALSAMLRAMRSGRIEAVFVVAVAL
IALIIQLPPLTLVPIIGQTVQWVNDYLVAAGARGLLLGSAIGALVAGVRLLIGFDMPYADR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23353; Mature: 23221

Theoretical pI: Translated: 11.69; Mature: 11.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPLRNPRQLITVLIAGVSGLIVLLDFVGAGPAVSTIAVVLVRWAALITAIAVAIGVLS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFFVHLRRARSRSAEAGYSLVLLAGMIVVIVAGIFYPTRTATGLSLPTTLADPPIRTVFR
HHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
LIYEPLAASLLALLSFFALSAMLRAMRSGRIEAVFVVAVALIALIIQLPPLTLVPIIGQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VQWVNDYLVAAGARGLLLGSAIGALVAGVRLLIGFDMPYADR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SSPLRNPRQLITVLIAGVSGLIVLLDFVGAGPAVSTIAVVLVRWAALITAIAVAIGVLS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFFVHLRRARSRSAEAGYSLVLLAGMIVVIVAGIFYPTRTATGLSLPTTLADPPIRTVFR
HHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
LIYEPLAASLLALLSFFALSAMLRAMRSGRIEAVFVVAVALIALIIQLPPLTLVPIIGQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VQWVNDYLVAAGARGLLLGSAIGALVAGVRLLIGFDMPYADR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA