| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is korA [H]
Identifier: 222523558
GI number: 222523558
Start: 317259
End: 319091
Strand: Direct
Name: korA [H]
Synonym: Chy400_0264
Alternate gene names: 222523558
Gene position: 317259-319091 (Clockwise)
Preceding gene: 222523557
Following gene: 222523559
Centisome position: 6.02
GC content: 58.48
Gene sequence:
>1833_bases ATGCAATCCCCCGAACCAGTTGTGAACGAGTTTGCCATCACCGCAGCCACCGTGAACGGCTCTGGTAGCCAGACAGCGAA CATGGTGCTAATGCGGGCCATCTTCAAGATGGGTATTCCCGTCTCCGGCAAGAACCTCTTTCCTTCCAACATTCAAGGTG AACCTACCTGGTACACTCTGCGGGTGAGCCAGGCCGGTTACACAGCCCGCCCGGCTGAAACACCAATTCTGGTGGCATTC AATCCGCGCACAGCCAACGACGATCTGTCGCAGTTACCACCCGGCGGAATTTGTCTCTACCCTGCCGATGGCCCCTGGCA GCCATCACGGACGGACATCATCCCATTTGCAATTCCGGTACGGCAACTGCTGGATCAGGTCGGCGTGAATCAGCGCCTCC GTACATACGCTGCCAATATGACTTACGTTGGCGCTTTGGCGGCGCTGCTCGGTATCGAAGATGCAGCCCTGGTCGCTGCG CTTAAGCAACAGTTTCGCGGTCGTCTCTCGGCGATTGAGCTAAACCTGGCGGTTATTCGCGCTGCCTATGCCTGGGCTGC CGCCGAACCGTCGCCTGCCCATGGACGCTTTCGGATCGCCCGGATGCAGGCAACTGACGGTATGATGCTGATTGACGGCA ACACAGCAGCAGCGATTGGCGCCATCACCGGCGGTGTGGGGGTTGTTGCCTGGTACCCGATCACGCCATCAAGTAGCCTG ATCGAGTCGCTGGAGAGTTATCTCCCCCGCCTGCGTCCGCCCACAGATGGCGCAACCTGCGCGATTGTGCAGGCAGAAGA CGAGATTGCCGCACTCGGGATTGTGATCGGTGCAGGTTGGGCCGGAGCGCGTGCGATGACGGCCACCTCTGGACCTGGCA TTTCGCTGATGAGTGAGTTTGCCGGTTTAGGGTTCTTTGCCGAAATTCCGGCAGTCATTTGGGATGTACAGCGGGTTGGC CCTTCGACCGGTCTACCGACCCGTACCGCTCAGGGTGATCTGATGGCTGTCTACTACCTCAGTCACGGTGACACGCGCCA CGTAATCTTGCTGCCTGGTACGATGGAAGAGTGTTTCAGCGATGCCCAGACCGCCTTTGACCTGGCCGAACAGTTACAGA CACCGGTCTTTGTCTTGAGCGATCTTGATCTGGGCATGAATATCTGGATGAGCAAGCCATTCACCTACCCGGAACAACCT CTCCAACGTGGGAAAGTGCTCAGCGCCGAGGAACTCTCCCGGCTAACGAACTACGCCCGCTTTGCCGACGTGGATGGTGA TGGGATCGGTTATCGAACCCTGCCCGGCAACCCTCACCCTCTGGCCGCTACGCTCAGTCGCGGTACCGGGCACAATGAAC GGAACGTGTACAGCGAACGCCCGGAAGACTGGCAGCGCAATATGGCGCGTCTCTGGCGCAAACACGAGACGGCACGCCGG CTGGTTCCGCGTCCTGTTATTGATGATCATCCTGAAGCAACGATTGGCCTGATCGGCTTTGGCTCAACCGCACCGGCTAT TAGCGAAGCCCGTGATCTCCTGGCTGCTGCCGGAATTCCTACCAGCAGTATGCGCGTGCGCGCACTTCCCTTCGGCCCGG AAGTGACGAACTTCATTGCTCGCCATCAAATCTGTGTCGTTATCGAGCAGAATCACGACGGGCAATTGCGGCAATTGCTC CAGCTTCACTGCCCGGCCTACGCTTCCCGGCTTGGCTCTGTGGCATGGTGTGATGGTTTACCACTGACCGCACCGTTTGT GCGCGATCAGGTATTGCATTGCCTGGAATCAATGCGCGAGACGATGATGATCGGCATCGGAACCGGTAACTAA
Upstream 100 bases:
>100_bases TTTCGTGCTGATTTCGCGGCAGTCGTACTTGCCATCTACCACACACCACTCGTATAATACGAACTACCGCTCAGTGTCGA GCATGTTTTGCGAGGAAGCT
Downstream 100 bases:
>100_bases GCGTATCAATCTGCCAGGTCGGAGGAATTATGACACAGGTCAACGCGATAGGATTATCGAAAGCCGATTACCGGGGCGCA CCCTCTACCCTTTGCGCCGG
Product: pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Products: NA
Alternate protein names: 2-ketoglutarate oxidoreductase alpha chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 610; Mature: 610
Protein sequence:
>610_residues MQSPEPVVNEFAITAATVNGSGSQTANMVLMRAIFKMGIPVSGKNLFPSNIQGEPTWYTLRVSQAGYTARPAETPILVAF NPRTANDDLSQLPPGGICLYPADGPWQPSRTDIIPFAIPVRQLLDQVGVNQRLRTYAANMTYVGALAALLGIEDAALVAA LKQQFRGRLSAIELNLAVIRAAYAWAAAEPSPAHGRFRIARMQATDGMMLIDGNTAAAIGAITGGVGVVAWYPITPSSSL IESLESYLPRLRPPTDGATCAIVQAEDEIAALGIVIGAGWAGARAMTATSGPGISLMSEFAGLGFFAEIPAVIWDVQRVG PSTGLPTRTAQGDLMAVYYLSHGDTRHVILLPGTMEECFSDAQTAFDLAEQLQTPVFVLSDLDLGMNIWMSKPFTYPEQP LQRGKVLSAEELSRLTNYARFADVDGDGIGYRTLPGNPHPLAATLSRGTGHNERNVYSERPEDWQRNMARLWRKHETARR LVPRPVIDDHPEATIGLIGFGSTAPAISEARDLLAAAGIPTSSMRVRALPFGPEVTNFIARHQICVVIEQNHDGQLRQLL QLHCPAYASRLGSVAWCDGLPLTAPFVRDQVLHCLESMRETMMIGIGTGN
Sequences:
>Translated_610_residues MQSPEPVVNEFAITAATVNGSGSQTANMVLMRAIFKMGIPVSGKNLFPSNIQGEPTWYTLRVSQAGYTARPAETPILVAF NPRTANDDLSQLPPGGICLYPADGPWQPSRTDIIPFAIPVRQLLDQVGVNQRLRTYAANMTYVGALAALLGIEDAALVAA LKQQFRGRLSAIELNLAVIRAAYAWAAAEPSPAHGRFRIARMQATDGMMLIDGNTAAAIGAITGGVGVVAWYPITPSSSL IESLESYLPRLRPPTDGATCAIVQAEDEIAALGIVIGAGWAGARAMTATSGPGISLMSEFAGLGFFAEIPAVIWDVQRVG PSTGLPTRTAQGDLMAVYYLSHGDTRHVILLPGTMEECFSDAQTAFDLAEQLQTPVFVLSDLDLGMNIWMSKPFTYPEQP LQRGKVLSAEELSRLTNYARFADVDGDGIGYRTLPGNPHPLAATLSRGTGHNERNVYSERPEDWQRNMARLWRKHETARR LVPRPVIDDHPEATIGLIGFGSTAPAISEARDLLAAAGIPTSSMRVRALPFGPEVTNFIARHQICVVIEQNHDGQLRQLL QLHCPAYASRLGSVAWCDGLPLTAPFVRDQVLHCLESMRETMMIGIGTGN >Mature_610_residues MQSPEPVVNEFAITAATVNGSGSQTANMVLMRAIFKMGIPVSGKNLFPSNIQGEPTWYTLRVSQAGYTARPAETPILVAF NPRTANDDLSQLPPGGICLYPADGPWQPSRTDIIPFAIPVRQLLDQVGVNQRLRTYAANMTYVGALAALLGIEDAALVAA LKQQFRGRLSAIELNLAVIRAAYAWAAAEPSPAHGRFRIARMQATDGMMLIDGNTAAAIGAITGGVGVVAWYPITPSSSL IESLESYLPRLRPPTDGATCAIVQAEDEIAALGIVIGAGWAGARAMTATSGPGISLMSEFAGLGFFAEIPAVIWDVQRVG PSTGLPTRTAQGDLMAVYYLSHGDTRHVILLPGTMEECFSDAQTAFDLAEQLQTPVFVLSDLDLGMNIWMSKPFTYPEQP LQRGKVLSAEELSRLTNYARFADVDGDGIGYRTLPGNPHPLAATLSRGTGHNERNVYSERPEDWQRNMARLWRKHETARR LVPRPVIDDHPEATIGLIGFGSTAPAISEARDLLAAAGIPTSSMRVRALPFGPEVTNFIARHQICVVIEQNHDGQLRQLL QLHCPAYASRLGSVAWCDGLPLTAPFVRDQVLHCLESMRETMMIGIGTGN
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005476 [H]
Pfam domain/function: PF01855 POR_N; PF02780 Transketolase_C [H]
EC number: =1.2.7.3 [H]
Molecular weight: Translated: 65774; Mature: 65774
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSPEPVVNEFAITAATVNGSGSQTANMVLMRAIFKMGIPVSGKNLFPSNIQGEPTWYTL CCCCCCCHHCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE RVSQAGYTARPAETPILVAFNPRTANDDLSQLPPGGICLYPADGPWQPSRTDIIPFAIPV EEECCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCCEEEECCCCCCCCCCCCEEEHHHHH RQLLDQVGVNQRLRTYAANMTYVGALAALLGIEDAALVAALKQQFRGRLSAIELNLAVIR HHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHEEEHHHHHHH AAYAWAAAEPSPAHGRFRIARMQATDGMMLIDGNTAAAIGAITGGVGVVAWYPITPSSSL HHHHHHCCCCCCCCCCEEEEEEECCCCEEEEECCCCEEHHHHCCCCEEEEEEECCCCHHH IESLESYLPRLRPPTDGATCAIVQAEDEIAALGIVIGAGWAGARAMTATSGPGISLMSEF HHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCEEEECCCCCHHHHHHH AGLGFFAEIPAVIWDVQRVGPSTGLPTRTAQGDLMAVYYLSHGDTRHVILLPGTMEECFS HCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCHHHHHH DAQTAFDLAEQLQTPVFVLSDLDLGMNIWMSKPFTYPEQPLQRGKVLSAEELSRLTNYAR HHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCCCCHHHCCCCCCHHHHHHHHHHHH FADVDGDGIGYRTLPGNPHPLAATLSRGTGHNERNVYSERPEDWQRNMARLWRKHETARR EECCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LVPRPVIDDHPEATIGLIGFGSTAPAISEARDLLAAAGIPTSSMRVRALPFGPEVTNFIA HCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHH RHQICVVIEQNHDGQLRQLLQLHCPAYASRLGSVAWCDGLPLTAPFVRDQVLHCLESMRE HCEEEEEEECCCCHHHHHHHHHHCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHH TMMIGIGTGN HEEEEEECCC >Mature Secondary Structure MQSPEPVVNEFAITAATVNGSGSQTANMVLMRAIFKMGIPVSGKNLFPSNIQGEPTWYTL CCCCCCCHHCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE RVSQAGYTARPAETPILVAFNPRTANDDLSQLPPGGICLYPADGPWQPSRTDIIPFAIPV EEECCCCCCCCCCCEEEEEECCCCCCCHHHHCCCCCEEEECCCCCCCCCCCCEEEHHHHH RQLLDQVGVNQRLRTYAANMTYVGALAALLGIEDAALVAALKQQFRGRLSAIELNLAVIR HHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHEEEHHHHHHH AAYAWAAAEPSPAHGRFRIARMQATDGMMLIDGNTAAAIGAITGGVGVVAWYPITPSSSL HHHHHHCCCCCCCCCCEEEEEEECCCCEEEEECCCCEEHHHHCCCCEEEEEEECCCCHHH IESLESYLPRLRPPTDGATCAIVQAEDEIAALGIVIGAGWAGARAMTATSGPGISLMSEF HHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCEEEECCCCCHHHHHHH AGLGFFAEIPAVIWDVQRVGPSTGLPTRTAQGDLMAVYYLSHGDTRHVILLPGTMEECFS HCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCHHHHHH DAQTAFDLAEQLQTPVFVLSDLDLGMNIWMSKPFTYPEQPLQRGKVLSAEELSRLTNYAR HHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCCCCHHHCCCCCCHHHHHHHHHHHH FADVDGDGIGYRTLPGNPHPLAATLSRGTGHNERNVYSERPEDWQRNMARLWRKHETARR EECCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LVPRPVIDDHPEATIGLIGFGSTAPAISEARDLLAAAGIPTSSMRVRALPFGPEVTNFIA HCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHH RHQICVVIEQNHDGQLRQLLQLHCPAYASRLGSVAWCDGLPLTAPFVRDQVLHCLESMRE HCEEEEEEECCCCHHHHHHHHHHCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHH TMMIGIGTGN HEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]