Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222523551
Identifier: 222523551
GI number: 222523551
Start: 308351
End: 309526
Strand: Reverse
Name: 222523551
Synonym: Chy400_0257
Alternate gene names: NA
Gene position: 309526-308351 (Counterclockwise)
Preceding gene: 222523552
Following gene: 222523548
Centisome position: 5.87
GC content: 56.46
Gene sequence:
>1176_bases TTGGCCGGTAATCAGAATGATTTGCGCCGTTTTGGCACAGCTTTGTTGTTGGGTGTAGCTGCCGGATTTGCCGCACGTTA TTACCTTGAAACACGTGCCCGTAACAGCACTCGCCCTGCCAGCGGTCTGATCGATTGGGAGCAGGCTCGCCAGGCTGCGT TGCGGCTGTCTCAATGGGAGCAGGCACCGGTGGATAATCGGGCTTTCCGGCGCGAGCAGTATGCGCGGATGGTGGCGCTC AGCGAACCTCTGATCGCCGACTATCTCGGTGTACGGCTACCTGAACCGGTAAGTCGGATTTTTGTCTTTGATCGGCGGGA ATGGCTGGAAGCGAATATCGTTTCATTTAGCCAGCTTTTTCGCCCGATTGAAGAGATGTACGAGAAGAACGGCGGTGGGC GGGGTGCACTCGGCGTGCTGATGAATGACGTTAGCAGCAAGCTCCTGGGCGTTCAGATTGGCGGCTTGCTCGGCTATCTG GCTCAACGGGTGCTCGGTCAGTACGATCTCAGTTTACTGTCGGCTGAGGCGACCGGCGGCTCACTCTATTTCGTGGAACC CAATATTGCCCGCGTCCAACAGCAACTGGGTCTGAGCGACGAGGATTTCCGGCTCTGGATTACGCTGCATGAAATGACCC ATGCCTTCGAGTTTGAAGCCTACCCATGGGTGCGCACGTACTTCCGCGAGCTACTTGAGCAAAATTTTGCCCTCGTCAGT GGGCAAATGCTCAGTAGTGGCAATAGCCTGGTCGATATGCTCATGCGCCTCTTGCAAGGTATTGGGAGTGGTCAACACTG GATCGAGACCGTGTTAACACCTGAGCAGCGAGCGGTTTTTGACCGGATTCAGGCGCTGATGTCGCTGATCGAAGGCTACG GGAATCACGTGATGAATGCAGTTGGTCGCCGGTTGTTGCCCAGCTTCAACCAGATTGAGCAGCAGATTGCCCAGCGCCAA CGCCAGCGCACCATGCTTGACCAGATGGTCTTCCGTCTGACCGGTCTCGATCTGAAGCTGGCTCAATATCAGCAGGGCGA GGCGTTTGTCAATGCGGTTGTCGCAGCGCGTGGCATTCAGTTTGCCAGCCGGGTATGGGAGCGACCGGAGAATCTGCCGT CGATGGATGAAATCCGCAATCCGGGGCAATGGATCGTGAGGATGGATCGGCAGTAG
Upstream 100 bases:
>100_bases CATTATGTGTGGATCGCCAGATTGGACAGGAGGCGATCAATCATGATAGACTCTTAACAGACACTAAACCTACCCCGCTC GCGCTGGAAAGGAGACTGCT
Downstream 100 bases:
>100_bases GCGAGGGTTGAAGTCGTTCTACCACATCTGGAAGTAGAGACAACTATCACCCTGGCCCTGACCGATACACACCGTGCGCA GACAATAGTCTGCCCCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MAGNQNDLRRFGTALLLGVAAGFAARYYLETRARNSTRPASGLIDWEQARQAALRLSQWEQAPVDNRAFRREQYARMVAL SEPLIADYLGVRLPEPVSRIFVFDRREWLEANIVSFSQLFRPIEEMYEKNGGGRGALGVLMNDVSSKLLGVQIGGLLGYL AQRVLGQYDLSLLSAEATGGSLYFVEPNIARVQQQLGLSDEDFRLWITLHEMTHAFEFEAYPWVRTYFRELLEQNFALVS GQMLSSGNSLVDMLMRLLQGIGSGQHWIETVLTPEQRAVFDRIQALMSLIEGYGNHVMNAVGRRLLPSFNQIEQQIAQRQ RQRTMLDQMVFRLTGLDLKLAQYQQGEAFVNAVVAARGIQFASRVWERPENLPSMDEIRNPGQWIVRMDRQ
Sequences:
>Translated_391_residues MAGNQNDLRRFGTALLLGVAAGFAARYYLETRARNSTRPASGLIDWEQARQAALRLSQWEQAPVDNRAFRREQYARMVAL SEPLIADYLGVRLPEPVSRIFVFDRREWLEANIVSFSQLFRPIEEMYEKNGGGRGALGVLMNDVSSKLLGVQIGGLLGYL AQRVLGQYDLSLLSAEATGGSLYFVEPNIARVQQQLGLSDEDFRLWITLHEMTHAFEFEAYPWVRTYFRELLEQNFALVS GQMLSSGNSLVDMLMRLLQGIGSGQHWIETVLTPEQRAVFDRIQALMSLIEGYGNHVMNAVGRRLLPSFNQIEQQIAQRQ RQRTMLDQMVFRLTGLDLKLAQYQQGEAFVNAVVAARGIQFASRVWERPENLPSMDEIRNPGQWIVRMDRQ >Mature_390_residues AGNQNDLRRFGTALLLGVAAGFAARYYLETRARNSTRPASGLIDWEQARQAALRLSQWEQAPVDNRAFRREQYARMVALS EPLIADYLGVRLPEPVSRIFVFDRREWLEANIVSFSQLFRPIEEMYEKNGGGRGALGVLMNDVSSKLLGVQIGGLLGYLA QRVLGQYDLSLLSAEATGGSLYFVEPNIARVQQQLGLSDEDFRLWITLHEMTHAFEFEAYPWVRTYFRELLEQNFALVSG QMLSSGNSLVDMLMRLLQGIGSGQHWIETVLTPEQRAVFDRIQALMSLIEGYGNHVMNAVGRRLLPSFNQIEQQIAQRQR QRTMLDQMVFRLTGLDLKLAQYQQGEAFVNAVVAARGIQFASRVWERPENLPSMDEIRNPGQWIVRMDRQ
Specific function: Unknown
COG id: COG5282
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44552; Mature: 44420
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGNQNDLRRFGTALLLGVAAGFAARYYLETRARNSTRPASGLIDWEQARQAALRLSQWE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH QAPVDNRAFRREQYARMVALSEPLIADYLGVRLPEPVSRIFVFDRREWLEANIVSFSQLF CCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RPIEEMYEKNGGGRGALGVLMNDVSSKLLGVQIGGLLGYLAQRVLGQYDLSLLSAEATGG HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC SLYFVEPNIARVQQQLGLSDEDFRLWITLHEMTHAFEFEAYPWVRTYFRELLEQNFALVS EEEEECCCHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHH GQMLSSGNSLVDMLMRLLQGIGSGQHWIETVLTPEQRAVFDRIQALMSLIEGYGNHVMNA HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VGRRLLPSFNQIEQQIAQRQRQRTMLDQMVFRLTGLDLKLAQYQQGEAFVNAVVAARGIQ HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH FASRVWERPENLPSMDEIRNPGQWIVRMDRQ HHHHHHHCCCCCCCHHHHCCCCCEEEEECCC >Mature Secondary Structure AGNQNDLRRFGTALLLGVAAGFAARYYLETRARNSTRPASGLIDWEQARQAALRLSQWE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH QAPVDNRAFRREQYARMVALSEPLIADYLGVRLPEPVSRIFVFDRREWLEANIVSFSQLF CCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RPIEEMYEKNGGGRGALGVLMNDVSSKLLGVQIGGLLGYLAQRVLGQYDLSLLSAEATGG HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCC SLYFVEPNIARVQQQLGLSDEDFRLWITLHEMTHAFEFEAYPWVRTYFRELLEQNFALVS EEEEECCCHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHH GQMLSSGNSLVDMLMRLLQGIGSGQHWIETVLTPEQRAVFDRIQALMSLIEGYGNHVMNA HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VGRRLLPSFNQIEQQIAQRQRQRTMLDQMVFRLTGLDLKLAQYQQGEAFVNAVVAARGIQ HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH FASRVWERPENLPSMDEIRNPGQWIVRMDRQ HHHHHHHCCCCCCCHHHHCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA