Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
---|---|
Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is mvaA [H]
Identifier: 222523545
GI number: 222523545
Start: 297583
End: 298902
Strand: Reverse
Name: mvaA [H]
Synonym: Chy400_0251
Alternate gene names: 222523545
Gene position: 298902-297583 (Counterclockwise)
Preceding gene: 222523547
Following gene: 222523544
Centisome position: 5.67
GC content: 58.41
Gene sequence:
>1320_bases ATGGGGACTAAGAGTTCTCGCTTACAAGGGTTTTATCAGCTTAATCCATTTGAGCGACTGCAAATGGTGAAATCCTTTGA TGGATTAGTCGATGAAGACTTACGCGCCTTGCACGGCGGCCATGGTGGTGCGCTCACGATTGAGCGTGCCGATAAAATGA TTGAGAATGTGATCGGTACCTATAATCTGCCGCTCGGTATCGCGACCAACTTCCGTATCAATGGCCGTGATTATCTGATT CCGATGGTGGTTGAAGAGCCGTCAATTGTGGCCGGGGCCAGCTACGCGGCGCGGATGGTGCGAGACGGGGGTGGGTTTGA GACGAGCAGTACCGAACCACTGATGATCGGTCAGGTGCAGTTGGTCAATGTTCGCGACCCCGATCAGGCCCGGCAAACGA TTTTGTCGCGTAAGGAAGAGATTCTTGCCCTGGCCAATGCGCAAAGTCGTTCGCTGGTCAGTCTGGGTGGCGGAGCACGC GATGTTGAGGTACGATTCTTCCCCACCAGCCCGATGGGGCCGATGCTGGTTGTGCATTTGATTATCGATTGCCGCGATGC GATGGGTGCCAACGCGGTGAATACGATGGCCGAGGCGGTCGCACCGCTGCTGGCCGAGATGACCGGTGGTAAGGTCTATC TGCGCATTCTCTCGAATCTGACCGACCGTCGGCTGGCTCGTGCCCGTTGTGTGGTGCCGGCAGCATCGCTGGCCCGCGAT GGTTTGAGTGGCGAAGAGGTTGTTGAAGGCATTCTCTGGGCCTATGCGTTTGCTGCGGTCGATCCCTATCGGGCGGCAAC CCACAACAAGGGCATTATGAACGGCATTGACCCGGTGCTGGTCGCAACCGGTAACGACTGGCGTGCGGTAGAGGCGGGTG CGCATGCCTACGCCAGCCGCAATGGTCACTATACGTCACTCTCCCATTGGGAGCGTGATGCGCAGGGTGACCTGGTTGGT ACGCTCGAAATGCCGCTGGCGGTAGGGATCGTGGGTGGCGCAACCAAAGTCCATCCCACCGCCCAGGCCGCGTTGAAACT GCTCGGTGTGCGTAGCGCTGCTGAACTGGCCGAGGTCTGTGTCGCTGCCGGTCTGGCGAATAATCTGGCGGCGATGCGTG CTCTGGCCTGTGAGGGTATTCAACAGGGACATATGAGCCTGCATGCCCGCCAGATCGCGATGGCTGCCGGTGCCAGTGGT ACCCTGGTTGATGAAGTTGCCCGGCGCATGGTCGCCGAGCGGAATATCAAACTGGCGCGTGCTGAAGAGATCATTGCCGA ACTCGAAGGGCGCACGATAGGTAACCCCACGCACAACTAA
Upstream 100 bases:
>100_bases TGATAGGTTTTGACAGTTGTTGTTAACCATTTCGCGACTATTGTCGTGGTATCGTAACAGCGGAAGACAAATATATATTG AGAGAAGGAGGCGTCCTCAT
Downstream 100 bases:
>100_bases TGTGATACCTCTGGCGGCCTGTTCTGCAGGCCGCCCCGACACCAACAGCGTGATGATGCGCCTGTGTTCACCGGCAGGTT GGCCGGTGAAGGGACTCTCT
Product: hydroxymethylglutaryl-CoA reductase
Products: NA
Alternate protein names: HMG-CoA reductase [H]
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MGTKSSRLQGFYQLNPFERLQMVKSFDGLVDEDLRALHGGHGGALTIERADKMIENVIGTYNLPLGIATNFRINGRDYLI PMVVEEPSIVAGASYAARMVRDGGGFETSSTEPLMIGQVQLVNVRDPDQARQTILSRKEEILALANAQSRSLVSLGGGAR DVEVRFFPTSPMGPMLVVHLIIDCRDAMGANAVNTMAEAVAPLLAEMTGGKVYLRILSNLTDRRLARARCVVPAASLARD GLSGEEVVEGILWAYAFAAVDPYRAATHNKGIMNGIDPVLVATGNDWRAVEAGAHAYASRNGHYTSLSHWERDAQGDLVG TLEMPLAVGIVGGATKVHPTAQAALKLLGVRSAAELAEVCVAAGLANNLAAMRALACEGIQQGHMSLHARQIAMAAGASG TLVDEVARRMVAERNIKLARAEEIIAELEGRTIGNPTHN
Sequences:
>Translated_439_residues MGTKSSRLQGFYQLNPFERLQMVKSFDGLVDEDLRALHGGHGGALTIERADKMIENVIGTYNLPLGIATNFRINGRDYLI PMVVEEPSIVAGASYAARMVRDGGGFETSSTEPLMIGQVQLVNVRDPDQARQTILSRKEEILALANAQSRSLVSLGGGAR DVEVRFFPTSPMGPMLVVHLIIDCRDAMGANAVNTMAEAVAPLLAEMTGGKVYLRILSNLTDRRLARARCVVPAASLARD GLSGEEVVEGILWAYAFAAVDPYRAATHNKGIMNGIDPVLVATGNDWRAVEAGAHAYASRNGHYTSLSHWERDAQGDLVG TLEMPLAVGIVGGATKVHPTAQAALKLLGVRSAAELAEVCVAAGLANNLAAMRALACEGIQQGHMSLHARQIAMAAGASG TLVDEVARRMVAERNIKLARAEEIIAELEGRTIGNPTHN >Mature_438_residues GTKSSRLQGFYQLNPFERLQMVKSFDGLVDEDLRALHGGHGGALTIERADKMIENVIGTYNLPLGIATNFRINGRDYLIP MVVEEPSIVAGASYAARMVRDGGGFETSSTEPLMIGQVQLVNVRDPDQARQTILSRKEEILALANAQSRSLVSLGGGARD VEVRFFPTSPMGPMLVVHLIIDCRDAMGANAVNTMAEAVAPLLAEMTGGKVYLRILSNLTDRRLARARCVVPAASLARDG LSGEEVVEGILWAYAFAAVDPYRAATHNKGIMNGIDPVLVATGNDWRAVEAGAHAYASRNGHYTSLSHWERDAQGDLVGT LEMPLAVGIVGGATKVHPTAQAALKLLGVRSAAELAEVCVAAGLANNLAAMRALACEGIQQGHMSLHARQIAMAAGASGT LVDEVARRMVAERNIKLARAEEIIAELEGRTIGNPTHN
Specific function: P.mevalonii can use mevalonate as sole carbon source. With this enzyme mevalonate is deacetylated to HMG-CoA [H]
COG id: COG1257
COG function: function code I; Hydroxymethylglutaryl-CoA reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HMG-CoA reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002202 - InterPro: IPR004553 - InterPro: IPR023074 - InterPro: IPR023076 - InterPro: IPR009023 - InterPro: IPR009029 [H]
Pfam domain/function: PF00368 HMG-CoA_red [H]
EC number: =1.1.1.88 [H]
Molecular weight: Translated: 46804; Mature: 46673
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: PS00318 HMG_COA_REDUCTASE_2 ; PS50065 HMG_COA_REDUCTASE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTKSSRLQGFYQLNPFERLQMVKSFDGLVDEDLRALHGGHGGALTIERADKMIENVIGT CCCCCCHHCEEEECCHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCC YNLPLGIATNFRINGRDYLIPMVVEEPSIVAGASYAARMVRDGGGFETSSTEPLMIGQVQ CCCCEEEEEEEEECCCEEEEEEEECCCCEEECHHHHHHHHHCCCCCCCCCCCCEEEEEEE LVNVRDPDQARQTILSRKEEILALANAQSRSLVSLGGGARDVEVRFFPTSPMGPMLVVHL EEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEEECCCCCCHHHHHHH IIDCRDAMGANAVNTMAEAVAPLLAEMTGGKVYLRILSNLTDRRLARARCVVPAASLARD HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC GLSGEEVVEGILWAYAFAAVDPYRAATHNKGIMNGIDPVLVATGNDWRAVEAGAHAYASR CCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEEECCCCEEEHHCCHHHHCC NGHYTSLSHWERDAQGDLVGTLEMPLAVGIVGGATKVHPTAQAALKLLGVRSAAELAEVC CCCCCCHHHHCCCCCCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHH VAAGLANNLAAMRALACEGIQQGHMSLHARQIAMAAGASGTLVDEVARRMVAERNIKLAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHH AEEIIAELEGRTIGNPTHN HHHHHHHHCCCCCCCCCCC >Mature Secondary Structure GTKSSRLQGFYQLNPFERLQMVKSFDGLVDEDLRALHGGHGGALTIERADKMIENVIGT CCCCCHHCEEEECCHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCC YNLPLGIATNFRINGRDYLIPMVVEEPSIVAGASYAARMVRDGGGFETSSTEPLMIGQVQ CCCCEEEEEEEEECCCEEEEEEEECCCCEEECHHHHHHHHHCCCCCCCCCCCCEEEEEEE LVNVRDPDQARQTILSRKEEILALANAQSRSLVSLGGGARDVEVRFFPTSPMGPMLVVHL EEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEEECCCCCCHHHHHHH IIDCRDAMGANAVNTMAEAVAPLLAEMTGGKVYLRILSNLTDRRLARARCVVPAASLARD HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC GLSGEEVVEGILWAYAFAAVDPYRAATHNKGIMNGIDPVLVATGNDWRAVEAGAHAYASR CCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEEECCCCEEEHHCCHHHHCC NGHYTSLSHWERDAQGDLVGTLEMPLAVGIVGGATKVHPTAQAALKLLGVRSAAELAEVC CCCCCCHHHHCCCCCCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHH VAAGLANNLAAMRALACEGIQQGHMSLHARQIAMAAGASGTLVDEVARRMVAERNIKLAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHH AEEIIAELEGRTIGNPTHN HHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2656635; 2477360; 2123872; 1634543; 10377386 [H]