Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
---|---|
Accession | NC_012032 |
Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222523542
Identifier: 222523542
GI number: 222523542
Start: 294448
End: 295074
Strand: Reverse
Name: 222523542
Synonym: Chy400_0248
Alternate gene names: NA
Gene position: 295074-294448 (Counterclockwise)
Preceding gene: 222523543
Following gene: 222523541
Centisome position: 5.6
GC content: 51.04
Gene sequence:
>627_bases GTGATTCAGGAAATGGTCAATGGCAGCATCGCCGTACTTACCCGTCCGTCGGTTCAGTCGTTCGAGCAACATGAGCGTGA CAATCTGGTCTGGGCGTTGATCTATGCGGTCATTGCAAGTGTGATCAACGGTATCCTTGCTGCAATCACAGCACCTTTAC GAGTTGGGGAGTTGCGTGCGCAACTTGAGACGCAAGGTGTGCCACCTGATGCCATTGAAGCGGCCATTGCTCAGCAGGGT AATCCGATCATTGCTATCTTTGCAGGGATTTTCGGCACGATTATCGGTTCACTTATTATTTGGGGTTTCATCTATCTGTT AGGCAGGGCTTTCGGCGGTACTGGTAGCTTCGGTGAGCTGGCCTGGGGCCTATCGCTCTTCTCGTCACCGCTGGCAGTAG CTCAGAGCATTGTATCTGTCATACCACTGGTCGGCGATATTCTGTTGCTCGGTCTTTCCATTTATGGAGTGTATCTCACC TATCTGGCAATCCAGTCCGGCATGAACCTGCCATCGCAGAAAGCGCTTTACATTGCCATCATTCTGCTGGTTATTACTTT GCTGTTCTTGTGTGTTACCGTTGGCCTTGCTGCTATAGTTGGCCTGATAGGAGGTCTGGCACCATGA
Upstream 100 bases:
>100_bases ATGTTCTGATTCGCGAATCGTAAGTTCACCCCTTCACAGAAATGGTTGCGTCAGGTACAATAAGGTTGTTTTCCGCCTGT TGTAACCAAGGAGCGCTCCC
Downstream 100 bases:
>100_bases AGATAGCCCGTCACTGGCGGGATCGGGTTCCGCGATACCGTCTCGAAGGACAACGTCACCGTTATACCGGTGAGATTCGT TTTCCGCCGCATCCACCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MIQEMVNGSIAVLTRPSVQSFEQHERDNLVWALIYAVIASVINGILAAITAPLRVGELRAQLETQGVPPDAIEAAIAQQG NPIIAIFAGIFGTIIGSLIIWGFIYLLGRAFGGTGSFGELAWGLSLFSSPLAVAQSIVSVIPLVGDILLLGLSIYGVYLT YLAIQSGMNLPSQKALYIAIILLVITLLFLCVTVGLAAIVGLIGGLAP
Sequences:
>Translated_208_residues MIQEMVNGSIAVLTRPSVQSFEQHERDNLVWALIYAVIASVINGILAAITAPLRVGELRAQLETQGVPPDAIEAAIAQQG NPIIAIFAGIFGTIIGSLIIWGFIYLLGRAFGGTGSFGELAWGLSLFSSPLAVAQSIVSVIPLVGDILLLGLSIYGVYLT YLAIQSGMNLPSQKALYIAIILLVITLLFLCVTVGLAAIVGLIGGLAP >Mature_208_residues MIQEMVNGSIAVLTRPSVQSFEQHERDNLVWALIYAVIASVINGILAAITAPLRVGELRAQLETQGVPPDAIEAAIAQQG NPIIAIFAGIFGTIIGSLIIWGFIYLLGRAFGGTGSFGELAWGLSLFSSPLAVAQSIVSVIPLVGDILLLGLSIYGVYLT YLAIQSGMNLPSQKALYIAIILLVITLLFLCVTVGLAAIVGLIGGLAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21772; Mature: 21772
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQEMVNGSIAVLTRPSVQSFEQHERDNLVWALIYAVIASVINGILAAITAPLRVGELRA CCHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLETQGVPPDAIEAAIAQQGNPIIAIFAGIFGTIIGSLIIWGFIYLLGRAFGGTGSFGEL HHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH AWGLSLFSSPLAVAQSIVSVIPLVGDILLLGLSIYGVYLTYLAIQSGMNLPSQKALYIAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH ILLVITLLFLCVTVGLAAIVGLIGGLAP HHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIQEMVNGSIAVLTRPSVQSFEQHERDNLVWALIYAVIASVINGILAAITAPLRVGELRA CCHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLETQGVPPDAIEAAIAQQGNPIIAIFAGIFGTIIGSLIIWGFIYLLGRAFGGTGSFGEL HHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH AWGLSLFSSPLAVAQSIVSVIPLVGDILLLGLSIYGVYLTYLAIQSGMNLPSQKALYIAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH ILLVITLLFLCVTVGLAAIVGLIGGLAP HHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA