Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222523533
Identifier: 222523533
GI number: 222523533
Start: 286633
End: 287892
Strand: Reverse
Name: 222523533
Synonym: Chy400_0239
Alternate gene names: NA
Gene position: 287892-286633 (Counterclockwise)
Preceding gene: 222523541
Following gene: 222523531
Centisome position: 5.46
GC content: 58.65
Gene sequence:
>1260_bases ATGACCTCGTCGTCAGAGGCGGTGTTGGCCCGCTATGCCCGGCGCAATTTCTGGTTAAATGTTCTCGATGGGAGTGCCTT TACGTTTGGGATTAGCCTGGTCTCGCGTTTTACGGTATTGCCGTTAATTGTCGAGCGCCTGACCGATGCCCGTTGGGTGC AGGGACTGATTCCGGCCATCTTTTTTGCCGGCTGGTTGCTACCGGGCTTATTTACCGCACCGCTCGTTGCCGCACAACCA CGCCGCAAACCGTGGGTGTTGATAGCGACCATTGGTGAACGGCTACCGTTTCTGGCGCTGGGCATTATTCTACTGACAAT GCCCGATCTACCGGCAAGTGTCCTGTTGGTGATTGTGCTGAGTTTATACGCGATCTTCGCAACGAGTGCCGGTCTAACCT CAATCGCCTGGCAAGATTTGATTGCCCGTATCATTCCGGCGCAGCGCTGGGGTGTCTTTTTTGGTTTGCAGGCCGGTCTG GGTGGTCTGTTCGGGATCGGTGGTGGTGCCCTCGCCGCAGCAATTCTGGCGCAACAACCTTTTCCCCAGAGTGCAGGCAT ACTGGCTCTGATCTGCTTTGCTGCGATGGTGGTTTCATACGTCTTCCTGGCACTAACGGTAGAGCCGGCCCAGGCACCGA TACCGACCCGTCCCTTTCACGTCTTCTTGCGTGGCCTGGGGCCGTTACTCCGCCGCGATGTTGCATTTCGCCGCTACCTC TTTTGTCGGGCTGCGATTGCCTTTGGCTTGACCGGTCATAGCTTTCTCACGGCGGCTGCCTTAGAGCGGTTTCACGTACC GGCGGCTGATATTGGTTTGTTCACCGGCGTGATGATGGCCGCTCAGGCGGTCGGCAATATCGGGCTGGGAGCGCTGGCAG ATCGCTGGGGGCACAAACAGGTGCTGGTGCTGTCAGCCGGCATGGGTATGGCTGCGTTAGTGCTGGCATTGCTGGCCCCC GTCAGTACGTGGTTCTTTATCATCTTTGCGCTGGTCGGTGCAGCTCAGGCCGGTTATCAACTCTCCGGCTTCACACTGGT TTTTGCATTCAGCCCACCTGCGGAACGCACGACCTACATTGGGGTGGCGAATCTGGCATTAGCGCCGGTAGCGGCGGCAG GGCCGGTTCTGGTCGGGGTGCTGGCAACCTTTACCGGCTACGGGATGATCTTTGTCTTACTGGCAATCGTCGGCCTGATC GGCATGGCAATGTTGCACTGGCAGGTGGCGGCACCGGTGCGGGCCGAGCAGGTGGCGTGA
Upstream 100 bases:
>100_bases CGATCCGTCGGGCGAACGATCCATGATCGGTACGACAGCGCTACGATAGAAGCTGTCATAATTGAACGATCAGCGGTGAA ACAAGGTAAGGAACGCTACT
Downstream 100 bases:
>100_bases TTAGTGCAAATACGTGGCTGAGAACACACGCCGCCGGCTCTCACCAGTGCATCTCTTCTGATATGGTTTGGTGAGTAGTT CCTGTCACACCCAATGTACG
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Facilitator Family
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MTSSSEAVLARYARRNFWLNVLDGSAFTFGISLVSRFTVLPLIVERLTDARWVQGLIPAIFFAGWLLPGLFTAPLVAAQP RRKPWVLIATIGERLPFLALGIILLTMPDLPASVLLVIVLSLYAIFATSAGLTSIAWQDLIARIIPAQRWGVFFGLQAGL GGLFGIGGGALAAAILAQQPFPQSAGILALICFAAMVVSYVFLALTVEPAQAPIPTRPFHVFLRGLGPLLRRDVAFRRYL FCRAAIAFGLTGHSFLTAAALERFHVPAADIGLFTGVMMAAQAVGNIGLGALADRWGHKQVLVLSAGMGMAALVLALLAP VSTWFFIIFALVGAAQAGYQLSGFTLVFAFSPPAERTTYIGVANLALAPVAAAGPVLVGVLATFTGYGMIFVLLAIVGLI GMAMLHWQVAAPVRAEQVA
Sequences:
>Translated_419_residues MTSSSEAVLARYARRNFWLNVLDGSAFTFGISLVSRFTVLPLIVERLTDARWVQGLIPAIFFAGWLLPGLFTAPLVAAQP RRKPWVLIATIGERLPFLALGIILLTMPDLPASVLLVIVLSLYAIFATSAGLTSIAWQDLIARIIPAQRWGVFFGLQAGL GGLFGIGGGALAAAILAQQPFPQSAGILALICFAAMVVSYVFLALTVEPAQAPIPTRPFHVFLRGLGPLLRRDVAFRRYL FCRAAIAFGLTGHSFLTAAALERFHVPAADIGLFTGVMMAAQAVGNIGLGALADRWGHKQVLVLSAGMGMAALVLALLAP VSTWFFIIFALVGAAQAGYQLSGFTLVFAFSPPAERTTYIGVANLALAPVAAAGPVLVGVLATFTGYGMIFVLLAIVGLI GMAMLHWQVAAPVRAEQVA >Mature_418_residues TSSSEAVLARYARRNFWLNVLDGSAFTFGISLVSRFTVLPLIVERLTDARWVQGLIPAIFFAGWLLPGLFTAPLVAAQPR RKPWVLIATIGERLPFLALGIILLTMPDLPASVLLVIVLSLYAIFATSAGLTSIAWQDLIARIIPAQRWGVFFGLQAGLG GLFGIGGGALAAAILAQQPFPQSAGILALICFAAMVVSYVFLALTVEPAQAPIPTRPFHVFLRGLGPLLRRDVAFRRYLF CRAAIAFGLTGHSFLTAAALERFHVPAADIGLFTGVMMAAQAVGNIGLGALADRWGHKQVLVLSAGMGMAALVLALLAPV STWFFIIFALVGAAQAGYQLSGFTLVFAFSPPAERTTYIGVANLALAPVAAAGPVLVGVLATFTGYGMIFVLLAIVGLIG MAMLHWQVAAPVRAEQVA
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44326; Mature: 44195
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSSEAVLARYARRNFWLNVLDGSAFTFGISLVSRFTVLPLIVERLTDARWVQGLIPAI CCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFAGWLLPGLFTAPLVAAQPRRKPWVLIATIGERLPFLALGIILLTMPDLPASVLLVIVL HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH SLYAIFATSAGLTSIAWQDLIARIIPAQRWGVFFGLQAGLGGLFGIGGGALAAAILAQQP HHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCC FPQSAGILALICFAAMVVSYVFLALTVEPAQAPIPTRPFHVFLRGLGPLLRRDVAFRRYL CCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FCRAAIAFGLTGHSFLTAAALERFHVPAADIGLFTGVMMAAQAVGNIGLGALADRWGHKQ HHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCE VLVLSAGMGMAALVLALLAPVSTWFFIIFALVGAAQAGYQLSGFTLVFAFSPPAERTTYI EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEEECCCCCCCEEE GVANLALAPVAAAGPVLVGVLATFTGYGMIFVLLAIVGLIGMAMLHWQVAAPVRAEQVA EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure TSSSEAVLARYARRNFWLNVLDGSAFTFGISLVSRFTVLPLIVERLTDARWVQGLIPAI CCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFAGWLLPGLFTAPLVAAQPRRKPWVLIATIGERLPFLALGIILLTMPDLPASVLLVIVL HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH SLYAIFATSAGLTSIAWQDLIARIIPAQRWGVFFGLQAGLGGLFGIGGGALAAAILAQQP HHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHCCC FPQSAGILALICFAAMVVSYVFLALTVEPAQAPIPTRPFHVFLRGLGPLLRRDVAFRRYL CCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FCRAAIAFGLTGHSFLTAAALERFHVPAADIGLFTGVMMAAQAVGNIGLGALADRWGHKQ HHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCE VLVLSAGMGMAALVLALLAPVSTWFFIIFALVGAAQAGYQLSGFTLVFAFSPPAERTTYI EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEEECCCCCCCEEE GVANLALAPVAAAGPVLVGVLATFTGYGMIFVLLAIVGLIGMAMLHWQVAAPVRAEQVA EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA