| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523519
Identifier: 222523519
GI number: 222523519
Start: 268968
End: 271652
Strand: Direct
Name: 222523519
Synonym: Chy400_0225
Alternate gene names: NA
Gene position: 268968-271652 (Clockwise)
Preceding gene: 222523518
Following gene: 222523520
Centisome position: 5.1
GC content: 56.98
Gene sequence:
>2685_bases ATGAAACGATTCCTGATCCGTTTCTGGGTTTTCTTGCTGATTGTCACGCTACTGCGTGTTGACCAGCCTATGCACGTAGT TCAGGCAGCAGGGTTTGTTGTTAATAGTCTGGCCGACGATACCGTAGATAATGACCTTTGTACTCTTCGCGAAGCGATTC TAACCTCTAACAATATCCCTCCAAACGATGATTGCGGCCCCGGCAGTGCTGATGATGATGTTATCACGTTTAGCGTAAGT GGAACAATAGTTCTAAATACGCCGATGGTAAATATTACCAGTGGACAAGGGGCATTGACCATTGATGGCGGCAGAAATAT CGTCATCAGTGGAAACAATCTTGCTATATTTACCGTCGCTGTCGGTGCGGATCTCACCCTAAGCAACCTGACAGTTACTG ATGGCAATGCGACGCTTGGTGGAGCGATCAATAACCTGGGAGGTACAGTAAATATTATCAATAGTACCTTCTCCAACAAT GATGCATCAAATCTGGGTGGAGCAATTTACAATACAGGTGGTATCGTCACAATCACCAGTAGCACTTTTACCAATAACAG TTCAGCTACTCTCGGTGGAGTTATTTATAATACAGGTGGCACGGTAACTATCACTAATAGCACCTTCTCTAATAATAACG CAGCTTTACTTGGCGGAACCATTTACAACGTTAGCGGAACTATCAATCTTTACAATACTATCGTTGCAAATAGTGGTAGC AGCGGTGATTGCGTGAACCTGGGCACAATTGGGGCTGCCTATAATAACCTGATTGAAGATAGCACCAATGCCTGTGGCTT GATAAATGGTGTGAATGGTAACATTATCGGGTCTGATCCTGATTTAGGCCCCCTGACAGGTGCTCCCGCCTACTTTCCTC TAAATACCGGTAGTCCGGCGATTGACAATGGGAGCAATGCTTACTGTGCAGCAACCGATCAGCGCGGCGTTTTACGGCCA CAGGATGGCGATGGAAACAGCAGTGTGGTTTGCGACATCGGTGCATATGAAGTAGATATTGCCACCCGGACGGTGGTGAA CATCACCCGCGCCGGAGCTGATCCCACCAACGCCGCTACGGCGACCTTTACCGTCACCTTCAGCGAGCCGGTCACCGGCC TGGACAGCGCCGACTTCAGCCTCACCACCACCGGCAGCATTAGTGGCGCGAGTGTCGGCAGCGTGAGCGGCAGTGGCGCG TCCTACACCGTTACCGTCACTACCGGTAGTGGCGATGGTACTCTGCGGCTGGACATTCCAACCGCTGCCACCATCACCGA CCTGGCCGGCAATACCGTCGGCGGGCTGCCGTTCACCGGCGGCGAGAGCTATACCATCGACAAGACCACCCCGACGGTGG TGAACATCACCCGCGCCGGAGCCGATCCCACCAACGCCACTACGGCGACCTTTACCGTCACCTTCAGCGAGCCGGTCACC GGCCTGGACAGCGCCGACTTCAGCCTCACCACCACCGGCAGCATCAGCGGCGCGAGTGTCGGCAGCGTGAGCGGCAGTGG CGCGTCCTACACCGTTACCGTGGCCACCGGCAGTGGTGATGGCAGTCTGCGACTGGACCTCAACCCATCCGGCACCGGGA TTACCGACAGCGCCGGGAATGCGATTAGCGGTGGCTTCACCGGCGGCGAGAGCTATACCATCGACAAGACCACCCCGACG GTGGTGAACATCACCCGCGCCGGAGCCGATCCCACCAACGCCACTACGGCGACCTTTACCGTCACCTTCAGCGAGCCGGT CACCGGCCTGGACAGCGCCGACTTCAGCCTCACCACCACCGGCAGCATCAGCGGCGCGAGTGTCGGCAGCGTGAGCGGCA GTGGCGCGTCCTACACCGTTACCGTCACTACTGGCAGTGGTGATGGCAGTCTGCGACTGGACCTCAACCCATCCGGCACC GGGATTACCGACAGCGCCGGGAATGCGATCAGCGGTGGCTTCACCGGCGGTGAGAGCTACACCATCGACAAGACCACCCC GACGGTGGTGAGCATCACCCGCGCCGAAGCTGACCCCACCAACGCCGCCACGGCGACCTTTACCGTCACCTTCAGCGAGC CGGTCACCGGTCTGGACAGCACCGACTTCAGCCTCACCACCACCGGCAGCATCAGCGGCGCGAGTGTCAGTAGCGTGAGT GGTAGTGGCGCGGCCTACACCGTTACTGTCACGACCGGCAGCGGCGATGGCAGCCTGCGGCTGGACATTCCAACCGCTGC CACCATCACCGACCTGGCCGGCAATGCCGTCGGCGGGCTGCCGTTCACCGGCGGTGAGAGCTATACTGTGGATCGGAGCC TGCTGACCGTCACCATTAACCAGGCTCCTGCACAGACAGACCCGGCCATTAGCAGCCCGATCCGCTTCATCGTGATCTTC AATAAGCCGATTAACCCGACCACCTTCACCGCCAGCGATATTACGCTCGGTGGTAGTGCACCCGGCACACTGACTGTCAC CATCACCGAGATTGCGCCAAACAACGGCACTACCTTCGAGGTAGTAGTCAGTGGGATGAGCGGCAACGGTACGGTCATCG CCAGTATTCCGGTGAATGTCGTGCAAGACCTGGCAGGGAACGGTAATACGGCCAGCACCAGTACTGACAACGAGGTGACC TACCAGCCTGAAATTCGTATCTATTTGCCGGTGATTATGCGGTAG
Upstream 100 bases:
>100_bases TCGGCAACACCTTCCCGTCTTTTACTTAGGGTATCCACTTAGAGAGGAGTGACTCACTTACTAAAGGCTTAACCTAATTA TCAACAAAGGGAGAACCTAT
Downstream 100 bases:
>100_bases GATCGTGGCTTCATCGCTCCCTGGCCCCTCCCTTCTCCAGGCTTCCGGGAGAGGCGAGGGGTCAGGCTATTGCGCAGCAT CATCATAAATCAACAACCCG
Product: polymorphic outer membrane protein
Products: NA
Alternate protein names: Outer Membrane Adhesin Like Proteiin; Fibronectin Type III Domain-Containing Protein; Ig Family Protein; Cell Wall Surface Anchor Family Protein
Number of amino acids: Translated: 894; Mature: 894
Protein sequence:
>894_residues MKRFLIRFWVFLLIVTLLRVDQPMHVVQAAGFVVNSLADDTVDNDLCTLREAILTSNNIPPNDDCGPGSADDDVITFSVS GTIVLNTPMVNITSGQGALTIDGGRNIVISGNNLAIFTVAVGADLTLSNLTVTDGNATLGGAINNLGGTVNIINSTFSNN DASNLGGAIYNTGGIVTITSSTFTNNSSATLGGVIYNTGGTVTITNSTFSNNNAALLGGTIYNVSGTINLYNTIVANSGS SGDCVNLGTIGAAYNNLIEDSTNACGLINGVNGNIIGSDPDLGPLTGAPAYFPLNTGSPAIDNGSNAYCAATDQRGVLRP QDGDGNSSVVCDIGAYEVDIATRTVVNITRAGADPTNAATATFTVTFSEPVTGLDSADFSLTTTGSISGASVGSVSGSGA SYTVTVTTGSGDGTLRLDIPTAATITDLAGNTVGGLPFTGGESYTIDKTTPTVVNITRAGADPTNATTATFTVTFSEPVT GLDSADFSLTTTGSISGASVGSVSGSGASYTVTVATGSGDGSLRLDLNPSGTGITDSAGNAISGGFTGGESYTIDKTTPT VVNITRAGADPTNATTATFTVTFSEPVTGLDSADFSLTTTGSISGASVGSVSGSGASYTVTVTTGSGDGSLRLDLNPSGT GITDSAGNAISGGFTGGESYTIDKTTPTVVSITRAEADPTNAATATFTVTFSEPVTGLDSTDFSLTTTGSISGASVSSVS GSGAAYTVTVTTGSGDGSLRLDIPTAATITDLAGNAVGGLPFTGGESYTVDRSLLTVTINQAPAQTDPAISSPIRFIVIF NKPINPTTFTASDITLGGSAPGTLTVTITEIAPNNGTTFEVVVSGMSGNGTVIASIPVNVVQDLAGNGNTASTSTDNEVT YQPEIRIYLPVIMR
Sequences:
>Translated_894_residues MKRFLIRFWVFLLIVTLLRVDQPMHVVQAAGFVVNSLADDTVDNDLCTLREAILTSNNIPPNDDCGPGSADDDVITFSVS GTIVLNTPMVNITSGQGALTIDGGRNIVISGNNLAIFTVAVGADLTLSNLTVTDGNATLGGAINNLGGTVNIINSTFSNN DASNLGGAIYNTGGIVTITSSTFTNNSSATLGGVIYNTGGTVTITNSTFSNNNAALLGGTIYNVSGTINLYNTIVANSGS SGDCVNLGTIGAAYNNLIEDSTNACGLINGVNGNIIGSDPDLGPLTGAPAYFPLNTGSPAIDNGSNAYCAATDQRGVLRP QDGDGNSSVVCDIGAYEVDIATRTVVNITRAGADPTNAATATFTVTFSEPVTGLDSADFSLTTTGSISGASVGSVSGSGA SYTVTVTTGSGDGTLRLDIPTAATITDLAGNTVGGLPFTGGESYTIDKTTPTVVNITRAGADPTNATTATFTVTFSEPVT GLDSADFSLTTTGSISGASVGSVSGSGASYTVTVATGSGDGSLRLDLNPSGTGITDSAGNAISGGFTGGESYTIDKTTPT VVNITRAGADPTNATTATFTVTFSEPVTGLDSADFSLTTTGSISGASVGSVSGSGASYTVTVTTGSGDGSLRLDLNPSGT GITDSAGNAISGGFTGGESYTIDKTTPTVVSITRAEADPTNAATATFTVTFSEPVTGLDSTDFSLTTTGSISGASVSSVS GSGAAYTVTVTTGSGDGSLRLDIPTAATITDLAGNAVGGLPFTGGESYTVDRSLLTVTINQAPAQTDPAISSPIRFIVIF NKPINPTTFTASDITLGGSAPGTLTVTITEIAPNNGTTFEVVVSGMSGNGTVIASIPVNVVQDLAGNGNTASTSTDNEVT YQPEIRIYLPVIMR >Mature_894_residues MKRFLIRFWVFLLIVTLLRVDQPMHVVQAAGFVVNSLADDTVDNDLCTLREAILTSNNIPPNDDCGPGSADDDVITFSVS GTIVLNTPMVNITSGQGALTIDGGRNIVISGNNLAIFTVAVGADLTLSNLTVTDGNATLGGAINNLGGTVNIINSTFSNN DASNLGGAIYNTGGIVTITSSTFTNNSSATLGGVIYNTGGTVTITNSTFSNNNAALLGGTIYNVSGTINLYNTIVANSGS SGDCVNLGTIGAAYNNLIEDSTNACGLINGVNGNIIGSDPDLGPLTGAPAYFPLNTGSPAIDNGSNAYCAATDQRGVLRP QDGDGNSSVVCDIGAYEVDIATRTVVNITRAGADPTNAATATFTVTFSEPVTGLDSADFSLTTTGSISGASVGSVSGSGA SYTVTVTTGSGDGTLRLDIPTAATITDLAGNTVGGLPFTGGESYTIDKTTPTVVNITRAGADPTNATTATFTVTFSEPVT GLDSADFSLTTTGSISGASVGSVSGSGASYTVTVATGSGDGSLRLDLNPSGTGITDSAGNAISGGFTGGESYTIDKTTPT VVNITRAGADPTNATTATFTVTFSEPVTGLDSADFSLTTTGSISGASVGSVSGSGASYTVTVTTGSGDGSLRLDLNPSGT GITDSAGNAISGGFTGGESYTIDKTTPTVVSITRAEADPTNAATATFTVTFSEPVTGLDSTDFSLTTTGSISGASVSSVS GSGAAYTVTVTTGSGDGSLRLDIPTAATITDLAGNAVGGLPFTGGESYTVDRSLLTVTINQAPAQTDPAISSPIRFIVIF NKPINPTTFTASDITLGGSAPGTLTVTITEIAPNNGTTFEVVVSGMSGNGTVIASIPVNVVQDLAGNGNTASTSTDNEVT YQPEIRIYLPVIMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89210; Mature: 89210
Theoretical pI: Translated: 3.71; Mature: 3.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFLIRFWVFLLIVTLLRVDQPMHVVQAAGFVVNSLADDTVDNDLCTLREAILTSNNIP CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC PNDDCGPGSADDDVITFSVSGTIVLNTPMVNITSGQGALTIDGGRNIVISGNNLAIFTVA CCCCCCCCCCCCCEEEEEECCEEEEECCEEEEECCCCEEEECCCCEEEEECCCEEEEEEE VGADLTLSNLTVTDGNATLGGAINNLGGTVNIINSTFSNNDASNLGGAIYNTGGIVTITS ECCCEEEEEEEEECCCCEECCCHHCCCCEEEEEEEECCCCCCHHCCCEEEECCCEEEEEE STFTNNSSATLGGVIYNTGGTVTITNSTFSNNNAALLGGTIYNVSGTINLYNTIVANSGS CEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEEEEEEEEEEEEEEEEEEECCCC SGDCVNLGTIGAAYNNLIEDSTNACGLINGVNGNIIGSDPDLGPLTGAPAYFPLNTGSPA CCCEEEECCCHHHHHHHHHCCCCCCEEEECCCCCEECCCCCCCCCCCCCEEEECCCCCCC IDNGSNAYCAATDQRGVLRPQDGDGNSSVVCDIGAYEVDIATRTVVNITRAGADPTNAAT CCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEEECCCCCCCCEE ATFTVTFSEPVTGLDSADFSLTTTGSISGASVGSVSGSGASYTVTVTTGSGDGTLRLDIP EEEEEEECCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCEEEEEEEECCCCCEEEEECC TAATITDLAGNTVGGLPFTGGESYTIDKTTPTVVNITRAGADPTNATTATFTVTFSEPVT CCEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCEEEEEEEEECCCCC GLDSADFSLTTTGSISGASVGSVSGSGASYTVTVATGSGDGSLRLDLNPSGTGITDSAGN CCCCCCEEEEECCCCCCCEECCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCC AISGGFTGGESYTIDKTTPTVVNITRAGADPTNATTATFTVTFSEPVTGLDSADFSLTTT CEECCCCCCCEEEEECCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEC GSISGASVGSVSGSGASYTVTVTTGSGDGSLRLDLNPSGTGITDSAGNAISGGFTGGESY CCCCCCEECCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEECCCCCCCEE TIDKTTPTVVSITRAEADPTNAATATFTVTFSEPVTGLDSTDFSLTTTGSISGASVSSVS EECCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEECCC GSGAAYTVTVTTGSGDGSLRLDIPTAATITDLAGNAVGGLPFTGGESYTVDRSLLTVTIN CCCEEEEEEEEECCCCCEEEEECCCCEEEHHHCCCCCCCCCCCCCCCEEECCEEEEEEEE QAPAQTDPAISSPIRFIVIFNKPINPTTFTASDITLGGSAPGTLTVTITEIAPNNGTTFE CCCCCCCCCCCCCEEEEEEECCCCCCCEEEECEEEECCCCCCEEEEEEEEECCCCCCEEE VVVSGMSGNGTVIASIPVNVVQDLAGNGNTASTSTDNEVTYQPEIRIYLPVIMR EEEECCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEEEEEC >Mature Secondary Structure MKRFLIRFWVFLLIVTLLRVDQPMHVVQAAGFVVNSLADDTVDNDLCTLREAILTSNNIP CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC PNDDCGPGSADDDVITFSVSGTIVLNTPMVNITSGQGALTIDGGRNIVISGNNLAIFTVA CCCCCCCCCCCCCEEEEEECCEEEEECCEEEEECCCCEEEECCCCEEEEECCCEEEEEEE VGADLTLSNLTVTDGNATLGGAINNLGGTVNIINSTFSNNDASNLGGAIYNTGGIVTITS ECCCEEEEEEEEECCCCEECCCHHCCCCEEEEEEEECCCCCCHHCCCEEEECCCEEEEEE STFTNNSSATLGGVIYNTGGTVTITNSTFSNNNAALLGGTIYNVSGTINLYNTIVANSGS CEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEEEEEEEEEEEEEEEEEEECCCC SGDCVNLGTIGAAYNNLIEDSTNACGLINGVNGNIIGSDPDLGPLTGAPAYFPLNTGSPA CCCEEEECCCHHHHHHHHHCCCCCCEEEECCCCCEECCCCCCCCCCCCCEEEECCCCCCC IDNGSNAYCAATDQRGVLRPQDGDGNSSVVCDIGAYEVDIATRTVVNITRAGADPTNAAT CCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEEECCCCCCCCEE ATFTVTFSEPVTGLDSADFSLTTTGSISGASVGSVSGSGASYTVTVTTGSGDGTLRLDIP EEEEEEECCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCEEEEEEEECCCCCEEEEECC TAATITDLAGNTVGGLPFTGGESYTIDKTTPTVVNITRAGADPTNATTATFTVTFSEPVT CCEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCEEEEEEEEECCCCC GLDSADFSLTTTGSISGASVGSVSGSGASYTVTVATGSGDGSLRLDLNPSGTGITDSAGN CCCCCCEEEEECCCCCCCEECCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCC AISGGFTGGESYTIDKTTPTVVNITRAGADPTNATTATFTVTFSEPVTGLDSADFSLTTT CEECCCCCCCEEEEECCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEC GSISGASVGSVSGSGASYTVTVTTGSGDGSLRLDLNPSGTGITDSAGNAISGGFTGGESY CCCCCCEECCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEECCCCCCCEE TIDKTTPTVVSITRAEADPTNAATATFTVTFSEPVTGLDSTDFSLTTTGSISGASVSSVS EECCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEECCC GSGAAYTVTVTTGSGDGSLRLDIPTAATITDLAGNAVGGLPFTGGESYTVDRSLLTVTIN CCCEEEEEEEEECCCCCEEEEECCCCEEEHHHCCCCCCCCCCCCCCCEEECCEEEEEEEE QAPAQTDPAISSPIRFIVIFNKPINPTTFTASDITLGGSAPGTLTVTITEIAPNNGTTFE CCCCCCCCCCCCCEEEEEEECCCCCCCEEEECEEEECCCCCCEEEEEEEEECCCCCCEEE VVVSGMSGNGTVIASIPVNVVQDLAGNGNTASTSTDNEVTYQPEIRIYLPVIMR EEEECCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA