Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222523519

Identifier: 222523519

GI number: 222523519

Start: 268968

End: 271652

Strand: Direct

Name: 222523519

Synonym: Chy400_0225

Alternate gene names: NA

Gene position: 268968-271652 (Clockwise)

Preceding gene: 222523518

Following gene: 222523520

Centisome position: 5.1

GC content: 56.98

Gene sequence:

>2685_bases
ATGAAACGATTCCTGATCCGTTTCTGGGTTTTCTTGCTGATTGTCACGCTACTGCGTGTTGACCAGCCTATGCACGTAGT
TCAGGCAGCAGGGTTTGTTGTTAATAGTCTGGCCGACGATACCGTAGATAATGACCTTTGTACTCTTCGCGAAGCGATTC
TAACCTCTAACAATATCCCTCCAAACGATGATTGCGGCCCCGGCAGTGCTGATGATGATGTTATCACGTTTAGCGTAAGT
GGAACAATAGTTCTAAATACGCCGATGGTAAATATTACCAGTGGACAAGGGGCATTGACCATTGATGGCGGCAGAAATAT
CGTCATCAGTGGAAACAATCTTGCTATATTTACCGTCGCTGTCGGTGCGGATCTCACCCTAAGCAACCTGACAGTTACTG
ATGGCAATGCGACGCTTGGTGGAGCGATCAATAACCTGGGAGGTACAGTAAATATTATCAATAGTACCTTCTCCAACAAT
GATGCATCAAATCTGGGTGGAGCAATTTACAATACAGGTGGTATCGTCACAATCACCAGTAGCACTTTTACCAATAACAG
TTCAGCTACTCTCGGTGGAGTTATTTATAATACAGGTGGCACGGTAACTATCACTAATAGCACCTTCTCTAATAATAACG
CAGCTTTACTTGGCGGAACCATTTACAACGTTAGCGGAACTATCAATCTTTACAATACTATCGTTGCAAATAGTGGTAGC
AGCGGTGATTGCGTGAACCTGGGCACAATTGGGGCTGCCTATAATAACCTGATTGAAGATAGCACCAATGCCTGTGGCTT
GATAAATGGTGTGAATGGTAACATTATCGGGTCTGATCCTGATTTAGGCCCCCTGACAGGTGCTCCCGCCTACTTTCCTC
TAAATACCGGTAGTCCGGCGATTGACAATGGGAGCAATGCTTACTGTGCAGCAACCGATCAGCGCGGCGTTTTACGGCCA
CAGGATGGCGATGGAAACAGCAGTGTGGTTTGCGACATCGGTGCATATGAAGTAGATATTGCCACCCGGACGGTGGTGAA
CATCACCCGCGCCGGAGCTGATCCCACCAACGCCGCTACGGCGACCTTTACCGTCACCTTCAGCGAGCCGGTCACCGGCC
TGGACAGCGCCGACTTCAGCCTCACCACCACCGGCAGCATTAGTGGCGCGAGTGTCGGCAGCGTGAGCGGCAGTGGCGCG
TCCTACACCGTTACCGTCACTACCGGTAGTGGCGATGGTACTCTGCGGCTGGACATTCCAACCGCTGCCACCATCACCGA
CCTGGCCGGCAATACCGTCGGCGGGCTGCCGTTCACCGGCGGCGAGAGCTATACCATCGACAAGACCACCCCGACGGTGG
TGAACATCACCCGCGCCGGAGCCGATCCCACCAACGCCACTACGGCGACCTTTACCGTCACCTTCAGCGAGCCGGTCACC
GGCCTGGACAGCGCCGACTTCAGCCTCACCACCACCGGCAGCATCAGCGGCGCGAGTGTCGGCAGCGTGAGCGGCAGTGG
CGCGTCCTACACCGTTACCGTGGCCACCGGCAGTGGTGATGGCAGTCTGCGACTGGACCTCAACCCATCCGGCACCGGGA
TTACCGACAGCGCCGGGAATGCGATTAGCGGTGGCTTCACCGGCGGCGAGAGCTATACCATCGACAAGACCACCCCGACG
GTGGTGAACATCACCCGCGCCGGAGCCGATCCCACCAACGCCACTACGGCGACCTTTACCGTCACCTTCAGCGAGCCGGT
CACCGGCCTGGACAGCGCCGACTTCAGCCTCACCACCACCGGCAGCATCAGCGGCGCGAGTGTCGGCAGCGTGAGCGGCA
GTGGCGCGTCCTACACCGTTACCGTCACTACTGGCAGTGGTGATGGCAGTCTGCGACTGGACCTCAACCCATCCGGCACC
GGGATTACCGACAGCGCCGGGAATGCGATCAGCGGTGGCTTCACCGGCGGTGAGAGCTACACCATCGACAAGACCACCCC
GACGGTGGTGAGCATCACCCGCGCCGAAGCTGACCCCACCAACGCCGCCACGGCGACCTTTACCGTCACCTTCAGCGAGC
CGGTCACCGGTCTGGACAGCACCGACTTCAGCCTCACCACCACCGGCAGCATCAGCGGCGCGAGTGTCAGTAGCGTGAGT
GGTAGTGGCGCGGCCTACACCGTTACTGTCACGACCGGCAGCGGCGATGGCAGCCTGCGGCTGGACATTCCAACCGCTGC
CACCATCACCGACCTGGCCGGCAATGCCGTCGGCGGGCTGCCGTTCACCGGCGGTGAGAGCTATACTGTGGATCGGAGCC
TGCTGACCGTCACCATTAACCAGGCTCCTGCACAGACAGACCCGGCCATTAGCAGCCCGATCCGCTTCATCGTGATCTTC
AATAAGCCGATTAACCCGACCACCTTCACCGCCAGCGATATTACGCTCGGTGGTAGTGCACCCGGCACACTGACTGTCAC
CATCACCGAGATTGCGCCAAACAACGGCACTACCTTCGAGGTAGTAGTCAGTGGGATGAGCGGCAACGGTACGGTCATCG
CCAGTATTCCGGTGAATGTCGTGCAAGACCTGGCAGGGAACGGTAATACGGCCAGCACCAGTACTGACAACGAGGTGACC
TACCAGCCTGAAATTCGTATCTATTTGCCGGTGATTATGCGGTAG

Upstream 100 bases:

>100_bases
TCGGCAACACCTTCCCGTCTTTTACTTAGGGTATCCACTTAGAGAGGAGTGACTCACTTACTAAAGGCTTAACCTAATTA
TCAACAAAGGGAGAACCTAT

Downstream 100 bases:

>100_bases
GATCGTGGCTTCATCGCTCCCTGGCCCCTCCCTTCTCCAGGCTTCCGGGAGAGGCGAGGGGTCAGGCTATTGCGCAGCAT
CATCATAAATCAACAACCCG

Product: polymorphic outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Adhesin Like Proteiin; Fibronectin Type III Domain-Containing Protein; Ig Family Protein; Cell Wall Surface Anchor Family Protein

Number of amino acids: Translated: 894; Mature: 894

Protein sequence:

>894_residues
MKRFLIRFWVFLLIVTLLRVDQPMHVVQAAGFVVNSLADDTVDNDLCTLREAILTSNNIPPNDDCGPGSADDDVITFSVS
GTIVLNTPMVNITSGQGALTIDGGRNIVISGNNLAIFTVAVGADLTLSNLTVTDGNATLGGAINNLGGTVNIINSTFSNN
DASNLGGAIYNTGGIVTITSSTFTNNSSATLGGVIYNTGGTVTITNSTFSNNNAALLGGTIYNVSGTINLYNTIVANSGS
SGDCVNLGTIGAAYNNLIEDSTNACGLINGVNGNIIGSDPDLGPLTGAPAYFPLNTGSPAIDNGSNAYCAATDQRGVLRP
QDGDGNSSVVCDIGAYEVDIATRTVVNITRAGADPTNAATATFTVTFSEPVTGLDSADFSLTTTGSISGASVGSVSGSGA
SYTVTVTTGSGDGTLRLDIPTAATITDLAGNTVGGLPFTGGESYTIDKTTPTVVNITRAGADPTNATTATFTVTFSEPVT
GLDSADFSLTTTGSISGASVGSVSGSGASYTVTVATGSGDGSLRLDLNPSGTGITDSAGNAISGGFTGGESYTIDKTTPT
VVNITRAGADPTNATTATFTVTFSEPVTGLDSADFSLTTTGSISGASVGSVSGSGASYTVTVTTGSGDGSLRLDLNPSGT
GITDSAGNAISGGFTGGESYTIDKTTPTVVSITRAEADPTNAATATFTVTFSEPVTGLDSTDFSLTTTGSISGASVSSVS
GSGAAYTVTVTTGSGDGSLRLDIPTAATITDLAGNAVGGLPFTGGESYTVDRSLLTVTINQAPAQTDPAISSPIRFIVIF
NKPINPTTFTASDITLGGSAPGTLTVTITEIAPNNGTTFEVVVSGMSGNGTVIASIPVNVVQDLAGNGNTASTSTDNEVT
YQPEIRIYLPVIMR

Sequences:

>Translated_894_residues
MKRFLIRFWVFLLIVTLLRVDQPMHVVQAAGFVVNSLADDTVDNDLCTLREAILTSNNIPPNDDCGPGSADDDVITFSVS
GTIVLNTPMVNITSGQGALTIDGGRNIVISGNNLAIFTVAVGADLTLSNLTVTDGNATLGGAINNLGGTVNIINSTFSNN
DASNLGGAIYNTGGIVTITSSTFTNNSSATLGGVIYNTGGTVTITNSTFSNNNAALLGGTIYNVSGTINLYNTIVANSGS
SGDCVNLGTIGAAYNNLIEDSTNACGLINGVNGNIIGSDPDLGPLTGAPAYFPLNTGSPAIDNGSNAYCAATDQRGVLRP
QDGDGNSSVVCDIGAYEVDIATRTVVNITRAGADPTNAATATFTVTFSEPVTGLDSADFSLTTTGSISGASVGSVSGSGA
SYTVTVTTGSGDGTLRLDIPTAATITDLAGNTVGGLPFTGGESYTIDKTTPTVVNITRAGADPTNATTATFTVTFSEPVT
GLDSADFSLTTTGSISGASVGSVSGSGASYTVTVATGSGDGSLRLDLNPSGTGITDSAGNAISGGFTGGESYTIDKTTPT
VVNITRAGADPTNATTATFTVTFSEPVTGLDSADFSLTTTGSISGASVGSVSGSGASYTVTVTTGSGDGSLRLDLNPSGT
GITDSAGNAISGGFTGGESYTIDKTTPTVVSITRAEADPTNAATATFTVTFSEPVTGLDSTDFSLTTTGSISGASVSSVS
GSGAAYTVTVTTGSGDGSLRLDIPTAATITDLAGNAVGGLPFTGGESYTVDRSLLTVTINQAPAQTDPAISSPIRFIVIF
NKPINPTTFTASDITLGGSAPGTLTVTITEIAPNNGTTFEVVVSGMSGNGTVIASIPVNVVQDLAGNGNTASTSTDNEVT
YQPEIRIYLPVIMR
>Mature_894_residues
MKRFLIRFWVFLLIVTLLRVDQPMHVVQAAGFVVNSLADDTVDNDLCTLREAILTSNNIPPNDDCGPGSADDDVITFSVS
GTIVLNTPMVNITSGQGALTIDGGRNIVISGNNLAIFTVAVGADLTLSNLTVTDGNATLGGAINNLGGTVNIINSTFSNN
DASNLGGAIYNTGGIVTITSSTFTNNSSATLGGVIYNTGGTVTITNSTFSNNNAALLGGTIYNVSGTINLYNTIVANSGS
SGDCVNLGTIGAAYNNLIEDSTNACGLINGVNGNIIGSDPDLGPLTGAPAYFPLNTGSPAIDNGSNAYCAATDQRGVLRP
QDGDGNSSVVCDIGAYEVDIATRTVVNITRAGADPTNAATATFTVTFSEPVTGLDSADFSLTTTGSISGASVGSVSGSGA
SYTVTVTTGSGDGTLRLDIPTAATITDLAGNTVGGLPFTGGESYTIDKTTPTVVNITRAGADPTNATTATFTVTFSEPVT
GLDSADFSLTTTGSISGASVGSVSGSGASYTVTVATGSGDGSLRLDLNPSGTGITDSAGNAISGGFTGGESYTIDKTTPT
VVNITRAGADPTNATTATFTVTFSEPVTGLDSADFSLTTTGSISGASVGSVSGSGASYTVTVTTGSGDGSLRLDLNPSGT
GITDSAGNAISGGFTGGESYTIDKTTPTVVSITRAEADPTNAATATFTVTFSEPVTGLDSTDFSLTTTGSISGASVSSVS
GSGAAYTVTVTTGSGDGSLRLDIPTAATITDLAGNAVGGLPFTGGESYTVDRSLLTVTINQAPAQTDPAISSPIRFIVIF
NKPINPTTFTASDITLGGSAPGTLTVTITEIAPNNGTTFEVVVSGMSGNGTVIASIPVNVVQDLAGNGNTASTSTDNEVT
YQPEIRIYLPVIMR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 89210; Mature: 89210

Theoretical pI: Translated: 3.71; Mature: 3.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFLIRFWVFLLIVTLLRVDQPMHVVQAAGFVVNSLADDTVDNDLCTLREAILTSNNIP
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
PNDDCGPGSADDDVITFSVSGTIVLNTPMVNITSGQGALTIDGGRNIVISGNNLAIFTVA
CCCCCCCCCCCCCEEEEEECCEEEEECCEEEEECCCCEEEECCCCEEEEECCCEEEEEEE
VGADLTLSNLTVTDGNATLGGAINNLGGTVNIINSTFSNNDASNLGGAIYNTGGIVTITS
ECCCEEEEEEEEECCCCEECCCHHCCCCEEEEEEEECCCCCCHHCCCEEEECCCEEEEEE
STFTNNSSATLGGVIYNTGGTVTITNSTFSNNNAALLGGTIYNVSGTINLYNTIVANSGS
CEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEEEEEEEEEEEEEEEEEEECCCC
SGDCVNLGTIGAAYNNLIEDSTNACGLINGVNGNIIGSDPDLGPLTGAPAYFPLNTGSPA
CCCEEEECCCHHHHHHHHHCCCCCCEEEECCCCCEECCCCCCCCCCCCCEEEECCCCCCC
IDNGSNAYCAATDQRGVLRPQDGDGNSSVVCDIGAYEVDIATRTVVNITRAGADPTNAAT
CCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEEECCCCCCCCEE
ATFTVTFSEPVTGLDSADFSLTTTGSISGASVGSVSGSGASYTVTVTTGSGDGTLRLDIP
EEEEEEECCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCEEEEEEEECCCCCEEEEECC
TAATITDLAGNTVGGLPFTGGESYTIDKTTPTVVNITRAGADPTNATTATFTVTFSEPVT
CCEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCEEEEEEEEECCCCC
GLDSADFSLTTTGSISGASVGSVSGSGASYTVTVATGSGDGSLRLDLNPSGTGITDSAGN
CCCCCCEEEEECCCCCCCEECCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCC
AISGGFTGGESYTIDKTTPTVVNITRAGADPTNATTATFTVTFSEPVTGLDSADFSLTTT
CEECCCCCCCEEEEECCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEC
GSISGASVGSVSGSGASYTVTVTTGSGDGSLRLDLNPSGTGITDSAGNAISGGFTGGESY
CCCCCCEECCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEECCCCCCCEE
TIDKTTPTVVSITRAEADPTNAATATFTVTFSEPVTGLDSTDFSLTTTGSISGASVSSVS
EECCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEECCC
GSGAAYTVTVTTGSGDGSLRLDIPTAATITDLAGNAVGGLPFTGGESYTVDRSLLTVTIN
CCCEEEEEEEEECCCCCEEEEECCCCEEEHHHCCCCCCCCCCCCCCCEEECCEEEEEEEE
QAPAQTDPAISSPIRFIVIFNKPINPTTFTASDITLGGSAPGTLTVTITEIAPNNGTTFE
CCCCCCCCCCCCCEEEEEEECCCCCCCEEEECEEEECCCCCCEEEEEEEEECCCCCCEEE
VVVSGMSGNGTVIASIPVNVVQDLAGNGNTASTSTDNEVTYQPEIRIYLPVIMR
EEEECCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEEEEEC
>Mature Secondary Structure
MKRFLIRFWVFLLIVTLLRVDQPMHVVQAAGFVVNSLADDTVDNDLCTLREAILTSNNIP
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
PNDDCGPGSADDDVITFSVSGTIVLNTPMVNITSGQGALTIDGGRNIVISGNNLAIFTVA
CCCCCCCCCCCCCEEEEEECCEEEEECCEEEEECCCCEEEECCCCEEEEECCCEEEEEEE
VGADLTLSNLTVTDGNATLGGAINNLGGTVNIINSTFSNNDASNLGGAIYNTGGIVTITS
ECCCEEEEEEEEECCCCEECCCHHCCCCEEEEEEEECCCCCCHHCCCEEEECCCEEEEEE
STFTNNSSATLGGVIYNTGGTVTITNSTFSNNNAALLGGTIYNVSGTINLYNTIVANSGS
CEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEEEEEEEEEEEEEEEEEEECCCC
SGDCVNLGTIGAAYNNLIEDSTNACGLINGVNGNIIGSDPDLGPLTGAPAYFPLNTGSPA
CCCEEEECCCHHHHHHHHHCCCCCCEEEECCCCCEECCCCCCCCCCCCCEEEECCCCCCC
IDNGSNAYCAATDQRGVLRPQDGDGNSSVVCDIGAYEVDIATRTVVNITRAGADPTNAAT
CCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEEECCCCCCCCEE
ATFTVTFSEPVTGLDSADFSLTTTGSISGASVGSVSGSGASYTVTVTTGSGDGTLRLDIP
EEEEEEECCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCEEEEEEEECCCCCEEEEECC
TAATITDLAGNTVGGLPFTGGESYTIDKTTPTVVNITRAGADPTNATTATFTVTFSEPVT
CCEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCEEEEEEEEECCCCC
GLDSADFSLTTTGSISGASVGSVSGSGASYTVTVATGSGDGSLRLDLNPSGTGITDSAGN
CCCCCCEEEEECCCCCCCEECCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCC
AISGGFTGGESYTIDKTTPTVVNITRAGADPTNATTATFTVTFSEPVTGLDSADFSLTTT
CEECCCCCCCEEEEECCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEC
GSISGASVGSVSGSGASYTVTVTTGSGDGSLRLDLNPSGTGITDSAGNAISGGFTGGESY
CCCCCCEECCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEECCCCCCCEE
TIDKTTPTVVSITRAEADPTNAATATFTVTFSEPVTGLDSTDFSLTTTGSISGASVSSVS
EECCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEECCC
GSGAAYTVTVTTGSGDGSLRLDIPTAATITDLAGNAVGGLPFTGGESYTVDRSLLTVTIN
CCCEEEEEEEEECCCCCEEEEECCCCEEEHHHCCCCCCCCCCCCCCCEEECCEEEEEEEE
QAPAQTDPAISSPIRFIVIFNKPINPTTFTASDITLGGSAPGTLTVTITEIAPNNGTTFE
CCCCCCCCCCCCCEEEEEEECCCCCCCEEEECEEEECCCCCCEEEEEEEEECCCCCCEEE
VVVSGMSGNGTVIASIPVNVVQDLAGNGNTASTSTDNEVTYQPEIRIYLPVIMR
EEEECCCCCCEEEEECCHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA