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The map label for this gene is ydeP [H]

Identifier: 222523490

GI number: 222523490

Start: 232108

End: 234348

Strand: Reverse

Name: ydeP [H]

Synonym: Chy400_0196

Alternate gene names: 222523490

Gene position: 234348-232108 (Counterclockwise)

Preceding gene: 222523492

Following gene: 222523489

Centisome position: 4.45

GC content: 58.01

Gene sequence:

>2241_bases
ATGAAGCGACGGGGCTGGAATCCCGCGACGTGGGTCAGTCTGGTACCCAACGGTTTAGGCCACGTCAAACCGAACCACTA
TTGGGAGATCGTGCGTACTATTTGGGAAAATCGCGACAATCTCGGCAAAGCATGGCGTATCTTGCACGAAGGTGTATGCG
ACGGCTGCGCGTTGGGAACAGCCGGGTTGCGTGATTTCACAATGAAAGGTGTGCATCTCTGCACGGTGCGACTCAATCTG
CTGCGCCTGAACACGATGCCACCGCTCGACATTCATCGTTTGCACGATGTAGCCGACCTACAACGCCTGAACGGACGTGA
ACTGCGTGCTTTGGGCCGTCTCCCGTACCCGATGCTGCGCCGACGCGGCGAAGCCGGGTTTCGGCGGATCAGTTGGGATG
ATGCGCTCAACGAGATTGCTGCCCGGTTGCGTAACACCGATCCGCACCGGATGGCGTTTTACTTGACATCACGCGGGATT
ACGAATGAAACCTACTACGTAGCGCAGAAGGTGGCGCGTTTTCTCGGCACGAACAACGTTGACAACGCCGCCCGGCTCTG
CCACGCACCGAGTACCACGGCGATGAAGCAGGCGCTAGGGGTAGCTGCATCAACCTGTAGCTATCGTGATTGGATTGGTA
CCGATCTGCTAATCTTCATCGGCAGTGATGCGCCGAACAACCAGCCGGTAACGACCAAATATCTCTACTATGCCAAACAA
CACGGCACCCGTATCCTTGTCATCAATCCTTACCGCGAACCGGGACTGGAACGCTATTGGGTGCCAAGTGTCTTTGAAAG
TGCATTGTTTGGCACCCGACTGGCTGATCGCTTCTTCCAGATTCACACCGGTGGTGATATTGCCTTCCTGAATGGGACCC
TCAAGCACCTGATCGAGCGCAACTGGCTGGATTGGGACTTCATTTCAGCGCATACGCGCGACTTTGAGAGGGTGCAGGTG
GCACTGGCTCAGCAGTCGTGGGACGATCTGGAGCGGGCGAGTGGGGCAACGCGCGGCGAGATGCTGGCCTTCGCCGAGGC
GCTGGCTCAGGCGAAGAGTGCCGTATTCGTGTGGAGCATGGGCATTACCCAGCACGAGTACGGGGTAGAGAATGTGAAAG
CGATTCTGAATCTGGCCCTGGCCCGTGGCTTCATCGGACGTGAGTATTGTGGGGTGATGCCAATTCGCGGCCACAGCGGG
GTACAGGGCGGCGGTGAGATGGGGTGCACCGCTACCACCTTCCCTGGTGGTAAACCGATCACACCCGATACCGCGCACTG
GCTCGGCGAACAGTGGGGATTCGCAGTGCCGGCATGGAAAGGGCTGAGCTGCGGTGACATGCTCGATGTCGCCTACAACG
GCGAACTCGATGTCTTCTACGCGGTGGGTGGGAATTTTCTCGACACGATGCCCGATCCCGCTTACATTCGTACCGCGCTG
GCTCGACCGGCACTGCGCGTACACCAGGATATTGTGCTCACCACGCAGATGCTGGTTGAACCGGCAGACACCGTCATCTT
GCTACCGGCGGCCACCCGCTACGAGCAGCGCGATGGCGGAACCGAAACCTCAACCGAACGCGAAATCATCTTTTCACCGT
ACATTGCCCCACCACCAGCCGAGGCGCGTAGTGAGTGGGAGATTTTGCTGAGCGTGGCGGAACGAACGAAGCCAGAACAG
GCGCATCTGATCCATTTCGCCGACGGTCAGCAGATTCGGAATGAAATTGCCCGCATTGTCCCTGAATACAACGGGATTCA
GCATTTGCACCAGACCGGTGATCATATTCAATGGGGTGGGCGCATCCTGTGTCGCGATGGTCGGTTCGGTACACCCGATG
GAAAAGCGGTGTTCACACCGCTGAAGCCACCTGTAACTACCTTACCGCCGGCTATGTTCGTGCTAAAGACCCGCCGCGGC
AAGCAATTCAACTCGCTCATCCACGATGAACGTGATCCACTCAATGGTGCGCTGCGCGATGACGTGCTCATCAACCCTGT
TGACGCGGCCACACTCGGTGTTCGCGAAGGGGACTGGGTCATCTTGCGTTCAGCAGTTGGTGAAATGCGGGCACGGATCA
AGTTTGCACCGCTCAAATCGGGCAACATCCAGGTCCACTGGCCGGAGGGTAACGTCTTGATTGATGCCCATCAGCGCGAT
CCAGGGGCGGGTGTGCCGTCATACAAGGCGCTGGTCAGCATCCATCCGATCACTGAGGCGGTGCTTCAGGAGCAGCGCTA
A

Upstream 100 bases:

>100_bases
CCGGATAAATATTTGCTTCGGCAAACATACCCACCGTGCGCGTATTTGCTGGTACAATACCCTTAATATCCCCTCACAAG
GCAAACCGCGAGGAGGCAGT

Downstream 100 bases:

>100_bases
CGCGGGGCATACGGCATGATAACGCGAGCAAGCACCCGGCGCCGCACGATACTGAAGGTACGCGATGGGCGCTGGCAACA
GACAAAAGACACCGTCGTTG

Product: oxidoreductase alpha (molybdopterin) subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 746; Mature: 746

Protein sequence:

>746_residues
MKRRGWNPATWVSLVPNGLGHVKPNHYWEIVRTIWENRDNLGKAWRILHEGVCDGCALGTAGLRDFTMKGVHLCTVRLNL
LRLNTMPPLDIHRLHDVADLQRLNGRELRALGRLPYPMLRRRGEAGFRRISWDDALNEIAARLRNTDPHRMAFYLTSRGI
TNETYYVAQKVARFLGTNNVDNAARLCHAPSTTAMKQALGVAASTCSYRDWIGTDLLIFIGSDAPNNQPVTTKYLYYAKQ
HGTRILVINPYREPGLERYWVPSVFESALFGTRLADRFFQIHTGGDIAFLNGTLKHLIERNWLDWDFISAHTRDFERVQV
ALAQQSWDDLERASGATRGEMLAFAEALAQAKSAVFVWSMGITQHEYGVENVKAILNLALARGFIGREYCGVMPIRGHSG
VQGGGEMGCTATTFPGGKPITPDTAHWLGEQWGFAVPAWKGLSCGDMLDVAYNGELDVFYAVGGNFLDTMPDPAYIRTAL
ARPALRVHQDIVLTTQMLVEPADTVILLPAATRYEQRDGGTETSTEREIIFSPYIAPPPAEARSEWEILLSVAERTKPEQ
AHLIHFADGQQIRNEIARIVPEYNGIQHLHQTGDHIQWGGRILCRDGRFGTPDGKAVFTPLKPPVTTLPPAMFVLKTRRG
KQFNSLIHDERDPLNGALRDDVLINPVDAATLGVREGDWVILRSAVGEMRARIKFAPLKSGNIQVHWPEGNVLIDAHQRD
PGAGVPSYKALVSIHPITEAVLQEQR

Sequences:

>Translated_746_residues
MKRRGWNPATWVSLVPNGLGHVKPNHYWEIVRTIWENRDNLGKAWRILHEGVCDGCALGTAGLRDFTMKGVHLCTVRLNL
LRLNTMPPLDIHRLHDVADLQRLNGRELRALGRLPYPMLRRRGEAGFRRISWDDALNEIAARLRNTDPHRMAFYLTSRGI
TNETYYVAQKVARFLGTNNVDNAARLCHAPSTTAMKQALGVAASTCSYRDWIGTDLLIFIGSDAPNNQPVTTKYLYYAKQ
HGTRILVINPYREPGLERYWVPSVFESALFGTRLADRFFQIHTGGDIAFLNGTLKHLIERNWLDWDFISAHTRDFERVQV
ALAQQSWDDLERASGATRGEMLAFAEALAQAKSAVFVWSMGITQHEYGVENVKAILNLALARGFIGREYCGVMPIRGHSG
VQGGGEMGCTATTFPGGKPITPDTAHWLGEQWGFAVPAWKGLSCGDMLDVAYNGELDVFYAVGGNFLDTMPDPAYIRTAL
ARPALRVHQDIVLTTQMLVEPADTVILLPAATRYEQRDGGTETSTEREIIFSPYIAPPPAEARSEWEILLSVAERTKPEQ
AHLIHFADGQQIRNEIARIVPEYNGIQHLHQTGDHIQWGGRILCRDGRFGTPDGKAVFTPLKPPVTTLPPAMFVLKTRRG
KQFNSLIHDERDPLNGALRDDVLINPVDAATLGVREGDWVILRSAVGEMRARIKFAPLKSGNIQVHWPEGNVLIDAHQRD
PGAGVPSYKALVSIHPITEAVLQEQR
>Mature_746_residues
MKRRGWNPATWVSLVPNGLGHVKPNHYWEIVRTIWENRDNLGKAWRILHEGVCDGCALGTAGLRDFTMKGVHLCTVRLNL
LRLNTMPPLDIHRLHDVADLQRLNGRELRALGRLPYPMLRRRGEAGFRRISWDDALNEIAARLRNTDPHRMAFYLTSRGI
TNETYYVAQKVARFLGTNNVDNAARLCHAPSTTAMKQALGVAASTCSYRDWIGTDLLIFIGSDAPNNQPVTTKYLYYAKQ
HGTRILVINPYREPGLERYWVPSVFESALFGTRLADRFFQIHTGGDIAFLNGTLKHLIERNWLDWDFISAHTRDFERVQV
ALAQQSWDDLERASGATRGEMLAFAEALAQAKSAVFVWSMGITQHEYGVENVKAILNLALARGFIGREYCGVMPIRGHSG
VQGGGEMGCTATTFPGGKPITPDTAHWLGEQWGFAVPAWKGLSCGDMLDVAYNGELDVFYAVGGNFLDTMPDPAYIRTAL
ARPALRVHQDIVLTTQMLVEPADTVILLPAATRYEQRDGGTETSTEREIIFSPYIAPPPAEARSEWEILLSVAERTKPEQ
AHLIHFADGQQIRNEIARIVPEYNGIQHLHQTGDHIQWGGRILCRDGRFGTPDGKAVFTPLKPPVTTLPPAMFVLKTRRG
KQFNSLIHDERDPLNGALRDDVLINPVDAATLGVREGDWVILRSAVGEMRARIKFAPLKSGNIQVHWPEGNVLIDAHQRD
PGAGVPSYKALVSIHPITEAVLQEQR

Specific function: Probably involved in acid resistance [H]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=671, Percent_Identity=29.5081967213115, Blast_Score=268, Evalue=9e-73,
Organism=Escherichia coli, GI3868721, Length=669, Percent_Identity=28.2511210762332, Blast_Score=233, Evalue=3e-62,
Organism=Escherichia coli, GI3868719, Length=375, Percent_Identity=24.8, Blast_Score=115, Evalue=9e-27,
Organism=Escherichia coli, GI3868720, Length=378, Percent_Identity=24.3386243386243, Blast_Score=113, Evalue=5e-26,
Organism=Escherichia coli, GI1788534, Length=502, Percent_Identity=20.9163346613546, Blast_Score=87, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 83360; Mature: 83360

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRGWNPATWVSLVPNGLGHVKPNHYWEIVRTIWENRDNLGKAWRILHEGVCDGCALGT
CCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHCCC
AGLRDFTMKGVHLCTVRLNLLRLNTMPPLDIHRLHDVADLQRLNGRELRALGRLPYPMLR
CCCHHHHHCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHH
RRGEAGFRRISWDDALNEIAARLRNTDPHRMAFYLTSRGITNETYYVAQKVARFLGTNNV
CCCCCCCEECCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCC
DNAARLCHAPSTTAMKQALGVAASTCSYRDWIGTDLLIFIGSDAPNNQPVTTKYLYYAKQ
CHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCEEEEEEECCCCCCCCCEEEEEEEEEC
HGTRILVINPYREPGLERYWVPSVFESALFGTRLADRFFQIHTGGDIAFLNGTLKHLIER
CCCEEEEECCCCCCCCCCEECHHHHHHHHHHHHHHHHHEEEECCCCEEEECHHHHHHHHC
NWLDWDFISAHTRDFERVQVALAQQSWDDLERASGATRGEMLAFAEALAQAKSAVFVWSM
CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEEC
GITQHEYGVENVKAILNLALARGFIGREYCGVMPIRGHSGVQGGGEMGCTATTFPGGKPI
CCCHHHCCHHHHHHHHHHHHHHCCCCCHHHCEEEECCCCCCCCCCCCCCEEEECCCCCCC
TPDTAHWLGEQWGFAVPAWKGLSCGDMLDVAYNGELDVFYAVGGNFLDTMPDPAYIRTAL
CCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCHHHCCCCHHHHHHHH
ARPALRVHQDIVLTTQMLVEPADTVILLPAATRYEQRDGGTETSTEREIIFSPYIAPPPA
HCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCCCCCCEEEEECCCCCCCC
EARSEWEILLSVAERTKPEQAHLIHFADGQQIRNEIARIVPEYNGIQHLHQTGDHIQWGG
CHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHCCCEEECCC
RILCRDGRFGTPDGKAVFTPLKPPVTTLPPAMFVLKTRRGKQFNSLIHDERDPLNGALRD
EEEEECCCCCCCCCCEEEECCCCCCCCCCCHHEEEECCCCCHHHHHHCCCCCCCCCCCCC
DVLINPVDAATLGVREGDWVILRSAVGEMRARIKFAPLKSGNIQVHWPEGNVLIDAHQRD
CEEECCCCHHHCCCCCCCEEEEHHHHHHHHHEEEEEECCCCCEEEEECCCCEEEEECCCC
PGAGVPSYKALVSIHPITEAVLQEQR
CCCCCCCHHHEEEECHHHHHHHHCCC
>Mature Secondary Structure
MKRRGWNPATWVSLVPNGLGHVKPNHYWEIVRTIWENRDNLGKAWRILHEGVCDGCALGT
CCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHCCC
AGLRDFTMKGVHLCTVRLNLLRLNTMPPLDIHRLHDVADLQRLNGRELRALGRLPYPMLR
CCCHHHHHCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHH
RRGEAGFRRISWDDALNEIAARLRNTDPHRMAFYLTSRGITNETYYVAQKVARFLGTNNV
CCCCCCCEECCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCC
DNAARLCHAPSTTAMKQALGVAASTCSYRDWIGTDLLIFIGSDAPNNQPVTTKYLYYAKQ
CHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCEEEEEEECCCCCCCCCEEEEEEEEEC
HGTRILVINPYREPGLERYWVPSVFESALFGTRLADRFFQIHTGGDIAFLNGTLKHLIER
CCCEEEEECCCCCCCCCCEECHHHHHHHHHHHHHHHHHEEEECCCCEEEECHHHHHHHHC
NWLDWDFISAHTRDFERVQVALAQQSWDDLERASGATRGEMLAFAEALAQAKSAVFVWSM
CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEEC
GITQHEYGVENVKAILNLALARGFIGREYCGVMPIRGHSGVQGGGEMGCTATTFPGGKPI
CCCHHHCCHHHHHHHHHHHHHHCCCCCHHHCEEEECCCCCCCCCCCCCCEEEECCCCCCC
TPDTAHWLGEQWGFAVPAWKGLSCGDMLDVAYNGELDVFYAVGGNFLDTMPDPAYIRTAL
CCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCHHHCCCCHHHHHHHH
ARPALRVHQDIVLTTQMLVEPADTVILLPAATRYEQRDGGTETSTEREIIFSPYIAPPPA
HCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCCCCCCEEEEECCCCCCCC
EARSEWEILLSVAERTKPEQAHLIHFADGQQIRNEIARIVPEYNGIQHLHQTGDHIQWGG
CHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHCCCEEECCC
RILCRDGRFGTPDGKAVFTPLKPPVTTLPPAMFVLKTRRGKQFNSLIHDERDPLNGALRD
EEEEECCCCCCCCCCEEEECCCCCCCCCCCHHEEEECCCCCHHHHHHCCCCCCCCCCCCC
DVLINPVDAATLGVREGDWVILRSAVGEMRARIKFAPLKSGNIQVHWPEGNVLIDAHQRD
CEEECCCCHHHCCCCCCCEEEEHHHHHHHHHEEEEEECCCCCEEEEECCCCEEEEECCCC
PGAGVPSYKALVSIHPITEAVLQEQR
CCCCCCCHHHEEEECHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]